RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 GGPS1O95749 300 aa15.54■□□□□ 0.08
HMGN1-211ENST00000471260 IQCF3P0C7M6 154 aa15.54■□□□□ 0.08
HMGN1-211ENST00000471260 EXOSC10Q01780 885 aaKnown RBP15.54■□□□□ 0.08
HMGN1-211ENST00000471260 NEDD9Q14511 834 aa15.54■□□□□ 0.08
HMGN1-211ENST00000471260 RAB30Q15771 203 aa15.54■□□□□ 0.08
HMGN1-211ENST00000471260 PCNX4Q63HM2 1172 aa15.54■□□□□ 0.08
HMGN1-211ENST00000471260 TMTC3Q6ZXV5 915 aa15.54■□□□□ 0.08
HMGN1-211ENST00000471260 OTOP2Q7RTS6 562 aa15.54■□□□□ 0.08
HMGN1-211ENST00000471260 SKAP1Q86WV1 359 aa15.54■□□□□ 0.08
HMGN1-211ENST00000471260 C7orf31Q8N865 590 aa15.54■□□□□ 0.08
HMGN1-211ENST00000471260 IL31RAQ8NI17 732 aa15.54■□□□□ 0.08
HMGN1-211ENST00000471260 SCLYQ96I15 445 aa15.54■□□□□ 0.08
HMGN1-211ENST00000471260 SPATA33Q96N06 139 aa15.54■□□□□ 0.08
HMGN1-211ENST00000471260 MLXIPQ9HAP2 919 aa15.54■□□□□ 0.08
HMGN1-211ENST00000471260 SPATA31C2B4DYI2 1134 aa15.53■□□□□ 0.08
HMGN1-211ENST00000471260 FIBPO43427 364 aa15.53■□□□□ 0.08
HMGN1-211ENST00000471260 ACTN1P12814 892 aa15.53■□□□□ 0.08
HMGN1-211ENST00000471260 RXRAP19793 462 aa15.53■□□□□ 0.08
HMGN1-211ENST00000471260 UBA1P22314 1058 aaKnown RBP15.53■□□□□ 0.08
HMGN1-211ENST00000471260 PSEN2P49810 448 aa15.53■□□□□ 0.08
HMGN1-211ENST00000471260 RCAN1P53805 252 aa15.53■□□□□ 0.08
HMGN1-211ENST00000471260 MRPS9P82933 396 aaKnown RBP15.53■□□□□ 0.08
HMGN1-211ENST00000471260 RBL2Q08999 1139 aa15.53■□□□□ 0.08
HMGN1-211ENST00000471260 COL9A3Q14050 684 aaPredicted RBP15.53■□□□□ 0.08
HMGN1-211ENST00000471260 MFSD10Q14728 455 aa15.53■□□□□ 0.08
HMGN1-211ENST00000471260 HSDL1Q3SXM5 330 aa15.53■□□□□ 0.08
HMGN1-211ENST00000471260 APOA5Q6Q788 366 aa15.53■□□□□ 0.08
HMGN1-211ENST00000471260 AFAP1L1Q8TED9 768 aa15.53■□□□□ 0.08
HMGN1-211ENST00000471260 SENP7Q9BQF6 1050 aa15.53■□□□□ 0.08
HMGN1-211ENST00000471260 LRRC2Q9BYS8 371 aa15.53■□□□□ 0.08
HMGN1-211ENST00000471260 PBX4Q9BYU1 374 aa15.53■□□□□ 0.08
HMGN1-211ENST00000471260 ZNF576Q9H609 170 aa15.53■□□□□ 0.08
HMGN1-211ENST00000471260 PSTPIP2Q9H939 334 aa15.53■□□□□ 0.08
HMGN1-211ENST00000471260 MSRAQ9UJ68 235 aa15.53■□□□□ 0.08
HMGN1-211ENST00000471260 MYH7BA7E2Y1 1941 aa15.53■□□□□ 0.08
HMGN1-211ENST00000471260 CHMP4BP1P59074 171 aa15.52■□□□□ 0.08
HMGN1-211ENST00000471260 SP2Q02086 613 aa15.52■□□□□ 0.08
HMGN1-211ENST00000471260 KIAA0753Q2KHM9 967 aa15.52■□□□□ 0.08
HMGN1-211ENST00000471260 GDF6Q6KF10 455 aaPredicted RBP15.52■□□□□ 0.08
HMGN1-211ENST00000471260 USP17L6PQ6QN14 398 aa15.52■□□□□ 0.08
HMGN1-211ENST00000471260 METTL7BQ6UX53 244 aa15.52■□□□□ 0.08
HMGN1-211ENST00000471260 NLRX1Q86UT6 975 aa15.52■□□□□ 0.08
HMGN1-211ENST00000471260 MICU3Q86XE3 530 aa15.52■□□□□ 0.08
HMGN1-211ENST00000471260 GIMAP8Q8ND71 665 aaPredicted RBP15.52■□□□□ 0.08
HMGN1-211ENST00000471260 KCNB2Q92953 911 aa15.52■□□□□ 0.08
HMGN1-211ENST00000471260 VWCEQ96DN2 955 aa15.52■□□□□ 0.08
HMGN1-211ENST00000471260 CDHR1Q96JP9 859 aa15.52■□□□□ 0.08
HMGN1-211ENST00000471260 USP26Q9BXU7 913 aa15.52■□□□□ 0.08
HMGN1-211ENST00000471260 CXXC1Q9P0U4 656 aaPredicted RBP15.52■□□□□ 0.08
HMGN1-211ENST00000471260 HDAC6Q9UBN7 1215 aa15.52■□□□□ 0.08
HMGN1-211ENST00000471260 SLC4A7Q9Y6M7 1214 aa15.52■□□□□ 0.08
HMGN1-211ENST00000471260 ZBTB43O43298 467 aa15.51■□□□□ 0.07
HMGN1-211ENST00000471260 RASEFQ8IZ41 740 aa15.51■□□□□ 0.07
HMGN1-211ENST00000471260 CMTR1Q8N1G2 835 aaKnown RBP15.51■□□□□ 0.07
HMGN1-211ENST00000471260 CTAGE1Q96RT6 745 aa15.51■□□□□ 0.07
HMGN1-211ENST00000471260 C16orf70Q9BSU1 422 aa15.51■□□□□ 0.07
HMGN1-211ENST00000471260 ALG1Q9BT22 464 aa15.51■□□□□ 0.07
HMGN1-211ENST00000471260 CDH23Q9H251 3354 aa15.5■□□□□ 0.07
HMGN1-211ENST00000471260 hCG_1984214I3L0E3 225 aa15.5■□□□□ 0.07
HMGN1-211ENST00000471260 NOP56O00567 594 aaKnown RBP15.5■□□□□ 0.07
HMGN1-211ENST00000471260 MAFGO15525 162 aa15.5■□□□□ 0.07
HMGN1-211ENST00000471260 EPB41L2O43491 1005 aaKnown RBP15.5■□□□□ 0.07
HMGN1-211ENST00000471260 ZNF286BP0CG31 522 aa15.5■□□□□ 0.07
HMGN1-211ENST00000471260 FOSL2P15408 326 aa15.5■□□□□ 0.07
HMGN1-211ENST00000471260 SELPP16109 830 aa15.5■□□□□ 0.07
HMGN1-211ENST00000471260 PTK7Q13308 1070 aa15.5■□□□□ 0.07
HMGN1-211ENST00000471260 ADCK5Q3MIX3 580 aa15.5■□□□□ 0.07
HMGN1-211ENST00000471260 DEFB128Q7Z7B8 93 aa15.5■□□□□ 0.07
HMGN1-211ENST00000471260 CCDC82Q8N4S0 544 aa15.5■□□□□ 0.07
HMGN1-211ENST00000471260 ZNF713Q8N859 430 aaPredicted RBP15.5■□□□□ 0.07
HMGN1-211ENST00000471260 PHOSPHO2Q8TCD6 241 aa15.5■□□□□ 0.07
HMGN1-211ENST00000471260 GPKOWQ92917 476 aaPredicted RBP eCLIP15.5■□□□□ 0.07
HMGN1-211ENST00000471260 GPRASP2Q96D09 838 aa15.5■□□□□ 0.07
HMGN1-211ENST00000471260 EHMT1Q9H9B1 1298 aa15.5■□□□□ 0.07
HMGN1-211ENST00000471260 RTEL1Q9NZ71 1219 aa15.5■□□□□ 0.07
HMGN1-211ENST00000471260 SPDYE3A6NKU9 549 aa15.49■□□□□ 0.07
HMGN1-211ENST00000471260 ZBBXA8MT70 800 aa15.49■□□□□ 0.07
HMGN1-211ENST00000471260 GRXCR1A8MXD5 290 aa15.49■□□□□ 0.07
HMGN1-211ENST00000471260 H3BRB1 525 aa15.49■□□□□ 0.07
HMGN1-211ENST00000471260 BAIAP3O94812 1187 aa15.49■□□□□ 0.07
HMGN1-211ENST00000471260 REC8O95072 547 aa15.49■□□□□ 0.07
HMGN1-211ENST00000471260 ATP2A2P16615 1042 aaKnown RBP15.49■□□□□ 0.07
HMGN1-211ENST00000471260 HSPA4P34932 840 aa15.49■□□□□ 0.07
HMGN1-211ENST00000471260 PBX2P40425 430 aa15.49■□□□□ 0.07
HMGN1-211ENST00000471260 SEMA3FQ13275 785 aa15.49■□□□□ 0.07
HMGN1-211ENST00000471260 GRIN2CQ14957 1233 aa15.49■□□□□ 0.07
HMGN1-211ENST00000471260 RTN1Q16799 776 aa15.49■□□□□ 0.07
HMGN1-211ENST00000471260 PPP1R18Q6NYC8 613 aa15.49■□□□□ 0.07
HMGN1-211ENST00000471260 FBXL16Q8N461 479 aa15.49■□□□□ 0.07
HMGN1-211ENST00000471260 PPP1R13LQ8WUF5 828 aa15.49■□□□□ 0.07
HMGN1-211ENST00000471260 MYLIPQ8WY64 445 aa15.49■□□□□ 0.07
HMGN1-211ENST00000471260 ZFP91Q96JP5 570 aaPredicted RBP15.49■□□□□ 0.07
HMGN1-211ENST00000471260 SLC9A7Q96T83 725 aa15.49■□□□□ 0.07
HMGN1-211ENST00000471260 GLT8D2Q9H1C3 349 aa15.49■□□□□ 0.07
HMGN1-211ENST00000471260 TUT1Q9H6E5 874 aaKnown RBP15.49■□□□□ 0.07
HMGN1-211ENST00000471260 BRPF3Q9ULD4 1205 aa15.49■□□□□ 0.07
HMGN1-211ENST00000471260 PCDHA11Q9Y5I1 949 aa15.49■□□□□ 0.07
HMGN1-211ENST00000471260 CNTNAP5Q8WYK1 1306 aa15.48■□□□□ 0.07
HMGN1-211ENST00000471260 TRIP12Q14669 1992 aaPredicted RBP15.48■□□□□ 0.07
HMGN1-211ENST00000471260 CCDC196A0A1B0GTZ2 297 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms