RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 GFRA1P56159 465 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 RPL11P62913 178 aaKnown RBP2.35□□□□□ -2.03
UBXN4-207ENST00000471246 KCNAB2Q13303 367 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 SF1Q15637 639 aaKnown RBP2.35□□□□□ -2.03
UBXN4-207ENST00000471246 DDR2Q16832 855 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 PRSS53Q2L4Q9 553 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 E4F1Q66K89 784 aaPredicted RBP2.35□□□□□ -2.03
UBXN4-207ENST00000471246 ANKS3Q6ZW76 656 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 EEPD1Q7L9B9 569 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 B3GNT8Q7Z7M8 397 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 NLRP10Q86W26 655 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 CCDC103Q8IW40 242 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 PPIL6Q8IXY8 311 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 Q8N1Y9 231 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 CELF2-AS1Q8N7Q2 184 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 SLC43A3Q8NBI5 491 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 KREMEN2Q8NCW0 462 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 PLEKHO2Q8TD55 490 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 DPF3Q92784 378 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 DIO2Q92813 273 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 PEX11GQ96HA9 241 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 GMLQ99445 158 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 SSBP3Q9BWW4 388 aaPredicted RBP2.35□□□□□ -2.03
UBXN4-207ENST00000471246 PODXL2Q9NZ53 605 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 TMEFF2Q9UIK5 374 aaPredicted RBP2.35□□□□□ -2.03
UBXN4-207ENST00000471246 FBXL7Q9UJT9 491 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 R3HCC1Q9Y3T6 440 aaKnown RBP2.35□□□□□ -2.03
UBXN4-207ENST00000471246 PMF1-BGLAPU3KQ54 211 aa2.35□□□□□ -2.03
UBXN4-207ENST00000471246 C22orf46C9J442 243 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 AGRPO00253 132 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 MYO1BO43795 1136 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 ZBTB7AO95365 584 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 CPP00450 1065 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 NCAM1P13591 858 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 HOXC12P31275 282 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 KCNJ6P48051 423 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 SLC6A11P48066 632 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 PPP2R2AP63151 447 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 HTRA3P83110 453 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 FOXO4P98177 505 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 SLC9A5Q14940 896 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 TESK1Q15569 626 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 TBC1D10BQ4KMP7 808 aaPredicted RBP2.34□□□□□ -2.03
UBXN4-207ENST00000471246 ACBD5Q5T8D3 534 aaPredicted RBP2.34□□□□□ -2.03
UBXN4-207ENST00000471246 DNAJC10Q8IXB1 793 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 NLGN1Q8N2Q7 840 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 TMEM145Q8NBT3 493 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 SMARCC2Q8TAQ2 1214 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 FNIP1Q8TF40 1166 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 CPA5Q8WXQ8 436 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 SEC14L1Q92503 715 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 KISS1RQ969F8 398 aaPredicted RBP2.34□□□□□ -2.03
UBXN4-207ENST00000471246 C1orf159Q96HA4 380 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 AP5M1Q9H0R1 490 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 EPN3Q9H201 632 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 IKZF4Q9H2S9 585 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 ST7Q9NRC1 585 aa2.34□□□□□ -2.03
UBXN4-207ENST00000471246 A0A1W2PQU0 124 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 E9PSI1 815 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 ARNTLO00327 626 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 SGSM2O43147 1006 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 KLF4O43474 513 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 ONECUT2O95948 504 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 C8BP07358 591 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 CYP2C8P10632 490 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 LCP1P13796 627 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 LTBRP36941 435 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 BCL6P41182 706 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 GRIA2P42262 883 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 GTF2A2P52657 109 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 ZC3H6P61129 1189 aaKnown RBP2.33□□□□□ -2.04
UBXN4-207ENST00000471246 DLX2Q07687 328 aaPredicted RBP2.33□□□□□ -2.04
UBXN4-207ENST00000471246 CACNB2Q08289 660 aaPredicted RBP2.33□□□□□ -2.04
UBXN4-207ENST00000471246 MAP4K2Q12851 820 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 NAALADL2Q58DX5 795 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 SLC35F1Q5T1Q4 408 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 MROH9Q5TGP6 573 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 IQCEQ6IPM2 695 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 DENND5AQ6IQ26 1287 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 ETV3LQ6ZN32 361 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 SAPCD2Q86UD0 394 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 MIB1Q86YT6 1006 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 RIOX2Q8IUF8 465 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 RCBTB1Q8NDN9 531 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 KCTD13Q8WZ19 329 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 DDX11Q96FC9 970 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 TRMT2BQ96GJ1 504 aaKnown RBP2.33□□□□□ -2.04
UBXN4-207ENST00000471246 CCDC140Q96MF4 163 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 NOX5Q96PH1 765 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 CEP89Q96ST8 783 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 IER2Q9BTL4 223 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 COA3Q9Y2R0 106 aaPredicted RBP2.33□□□□□ -2.04
UBXN4-207ENST00000471246 TIMM13Q9Y5L4 95 aaPredicted RBP2.33□□□□□ -2.04
UBXN4-207ENST00000471246 X6R8D5 127 aa2.33□□□□□ -2.04
UBXN4-207ENST00000471246 WDR33Q9C0J8 1336 aaKnown RBP2.33□□□□□ -2.04
UBXN4-207ENST00000471246 SH3D21A4FU49 640 aa2.32□□□□□ -2.04
UBXN4-207ENST00000471246 DLX3O60479 287 aa2.32□□□□□ -2.04
UBXN4-207ENST00000471246 STK10O94804 968 aaKnown RBP2.32□□□□□ -2.04
UBXN4-207ENST00000471246 PLATP00750 562 aa2.32□□□□□ -2.04
UBXN4-207ENST00000471246 CAPNS1P04632 268 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms