RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 ABCA5Q8WWZ7 1642 aa4.02□□□□□ -1.77
UBXN4-206ENST00000470687 A0A1W2PQJ5 194 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 FZD7O75084 574 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 STK10O94804 968 aaKnown RBP4.01□□□□□ -1.77
UBXN4-206ENST00000470687 GSNP06396 782 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 GSTM1P09488 218 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 C6orf222P0C671 652 aaPredicted RBP4.01□□□□□ -1.77
UBXN4-206ENST00000470687 TACR1P25103 407 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 PMLP29590 882 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 GNL2Q13823 731 aaKnown RBP4.01□□□□□ -1.77
UBXN4-206ENST00000470687 RASGRF1Q13972 1273 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 PRSS53Q2L4Q9 553 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 ZNF227Q86WZ6 799 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 SMARCC2Q8TAQ2 1214 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 KISS1RQ969F8 398 aaPredicted RBP4.01□□□□□ -1.77
UBXN4-206ENST00000470687 CRBNQ96SW2 442 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 DNAJC7Q99615 494 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 MKRN2Q9H000 416 aaKnown RBP4.01□□□□□ -1.77
UBXN4-206ENST00000470687 OSBPL2Q9H1P3 480 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 PCED1AQ9H1Q7 454 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 CGGBP1Q9UFW8 167 aaPredicted RBP4.01□□□□□ -1.77
UBXN4-206ENST00000470687 FBXL7Q9UJT9 491 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 DBR1Q9UK59 544 aaKnown RBP4.01□□□□□ -1.77
UBXN4-206ENST00000470687 FBXL21Q9UKT6 434 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 TSC22D4Q9Y3Q8 395 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 BIVM-ERCC5R4GMW8 1640 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 ASXL2Q76L83 1435 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 KIF27Q86VH2 1401 aa4.01□□□□□ -1.77
UBXN4-206ENST00000470687 PBRM1Q86U86 1689 aa4□□□□□ -1.77
UBXN4-206ENST00000470687 PDPK1O15530 556 aa4□□□□□ -1.77
UBXN4-206ENST00000470687 CORO7P57737 925 aa4□□□□□ -1.77
UBXN4-206ENST00000470687 BMS1Q14692 1282 aaKnown RBP4□□□□□ -1.77
UBXN4-206ENST00000470687 NBPF6Q5VWK0 638 aa4□□□□□ -1.77
UBXN4-206ENST00000470687 CYP2R1Q6VVX0 501 aa4□□□□□ -1.77
UBXN4-206ENST00000470687 CCDC144CPQ8IYA2 1237 aa4□□□□□ -1.77
UBXN4-206ENST00000470687 COPS5Q92905 334 aa4□□□□□ -1.77
UBXN4-206ENST00000470687 MKL1Q969V6 931 aa4□□□□□ -1.77
UBXN4-206ENST00000470687 TSPAN17Q96FV3 270 aa4□□□□□ -1.77
UBXN4-206ENST00000470687 RCC1LQ96I51 464 aaKnown RBP4□□□□□ -1.77
UBXN4-206ENST00000470687 NBPF4Q96M43 638 aa4□□□□□ -1.77
UBXN4-206ENST00000470687 DEPDC7Q96QD5 511 aa4□□□□□ -1.77
UBXN4-206ENST00000470687 CDIP1Q9H305 208 aa4□□□□□ -1.77
UBXN4-206ENST00000470687 BCAS3Q9H6U6 928 aa4□□□□□ -1.77
UBXN4-206ENST00000470687 FHOD1Q9Y613 1164 aa4□□□□□ -1.77
UBXN4-206ENST00000470687 KIAA0586Q9BVV6 1533 aa4□□□□□ -1.77
UBXN4-206ENST00000470687 SHROOM2Q13796 1616 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 PRG4Q92954 1404 aaPredicted RBP3.99□□□□□ -1.77
UBXN4-206ENST00000470687 FGF10O15520 208 aaPredicted RBP3.99□□□□□ -1.77
UBXN4-206ENST00000470687 DLX3O60479 287 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 MSCO60682 206 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 DDAH1O94760 285 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 GLI4P10075 376 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 PPP2R2AP63151 447 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 SF3A1Q15459 793 aaKnown RBP3.99□□□□□ -1.77
UBXN4-206ENST00000470687 TKFCQ3LXA3 575 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 TNNI3KQ59H18 835 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 SLC35F1Q5T1Q4 408 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 TTLL7Q6ZT98 887 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 USP51Q70EK9 711 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 TRIM59Q8IWR1 403 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 LGI4Q8N135 537 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 FIBCD1Q8N539 461 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 NPLOC4Q8TAT6 608 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 FRS2Q8WU20 508 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 BTN2A2Q8WVV5 523 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 CPA5Q8WXQ8 436 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 DPF3Q92784 378 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 ZBTB8AQ96BR9 441 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 ZNF747Q9BV97 191 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 VPS11Q9H270 941 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 NOL6Q9H6R4 1146 aaKnown RBP3.99□□□□□ -1.77
UBXN4-206ENST00000470687 SIRPGQ9P1W8 387 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 PFDN2Q9UHV9 154 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 INVSQ9Y283 1065 aa3.99□□□□□ -1.77
UBXN4-206ENST00000470687 CEP170Q5SW79 1584 aa3.98□□□□□ -1.77
UBXN4-206ENST00000470687 A0A087WZG4 1122 aa3.98□□□□□ -1.77
UBXN4-206ENST00000470687 BLACEA4D250 179 aa3.98□□□□□ -1.77
UBXN4-206ENST00000470687 LCP1P13796 627 aa3.98□□□□□ -1.77
UBXN4-206ENST00000470687 CACNB2Q08289 660 aaPredicted RBP3.98□□□□□ -1.77
UBXN4-206ENST00000470687 SMAD4Q13485 552 aaKnown RBP3.98□□□□□ -1.77
UBXN4-206ENST00000470687 FXNQ16595 210 aa3.98□□□□□ -1.77
UBXN4-206ENST00000470687 INF2Q27J81 1249 aa3.98□□□□□ -1.77
UBXN4-206ENST00000470687 RGL3Q3MIN7 710 aa3.98□□□□□ -1.77
UBXN4-206ENST00000470687 FAM209AQ5JX71 171 aa3.98□□□□□ -1.77
UBXN4-206ENST00000470687 GLB1LQ6UWU2 654 aa3.98□□□□□ -1.77
UBXN4-206ENST00000470687 LIMS2Q7Z4I7 341 aa3.98□□□□□ -1.77
UBXN4-206ENST00000470687 NLGN2Q8NFZ4 835 aa3.98□□□□□ -1.77
UBXN4-206ENST00000470687 CLUHP3Q96NS8 147 aa3.98□□□□□ -1.77
UBXN4-206ENST00000470687 DSCC1Q9BVC3 393 aa3.98□□□□□ -1.77
UBXN4-206ENST00000470687 RXFP1Q9HBX9 757 aa3.98□□□□□ -1.77
UBXN4-206ENST00000470687 GPRC5CQ9NQ84 441 aa3.98□□□□□ -1.77
UBXN4-206ENST00000470687 USP35Q9P2H5 1018 aa3.98□□□□□ -1.77
UBXN4-206ENST00000470687 MRPL42Q9Y6G3 142 aaKnown RBP3.98□□□□□ -1.77
UBXN4-206ENST00000470687 ADAMTS12P58397 1594 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 PTPRGP23470 1445 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 MAPKBP1O60336 1514 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 ANKRD34BA5PLL1 514 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 CCDC85CA6NKD9 419 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 AURKAO14965 403 aa3.97□□□□□ -1.77
UBXN4-206ENST00000470687 SCG5P05408 212 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms