RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 BAZ1AQ9NRL2 1556 aaPredicted RBP5.68□□□□□ -1.5
COL3A1-205ENST00000470167 RSF1Q96T23 1441 aaPredicted RBP5.68□□□□□ -1.5
COL3A1-205ENST00000470167 ERICH2A1L162 156 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 CCDC162PA2VCL2 907 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 HNRNPCL2B2RXH8 293 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 LSM1O15116 133 aaKnown RBP5.68□□□□□ -1.5
COL3A1-205ENST00000470167 PLSCR1O15162 318 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 HNRNPCL1O60812 293 aaKnown RBP5.68□□□□□ -1.5
COL3A1-205ENST00000470167 TADA3O75528 432 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 PDGFAP04085 211 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 KRT18P05783 430 aaKnown RBP5.68□□□□□ -1.5
COL3A1-205ENST00000470167 RHOQP17081 205 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 MZF1P28698 734 aaPredicted RBP5.68□□□□□ -1.5
COL3A1-205ENST00000470167 SLC16A2P36021 539 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 CCT6AP40227 531 aaKnown RBP5.68□□□□□ -1.5
COL3A1-205ENST00000470167 MAPK8P45983 427 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 SCNN1BP51168 640 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 PMS2P54278 862 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 KRT83P78385 493 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 CYP4A11Q02928 519 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 FMR1Q06787 632 aaKnown RBP eCLIP5.68□□□□□ -1.5
COL3A1-205ENST00000470167 CUL3Q13618 768 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 LRP8Q14114 963 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 TAF1CQ15572 869 aaPredicted RBP5.68□□□□□ -1.5
COL3A1-205ENST00000470167 BCL2A1Q16548 175 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 GRAMD1BQ3KR37 738 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 KRT71Q3SY84 523 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 BEND6Q5SZJ8 279 aaPredicted RBP5.68□□□□□ -1.5
COL3A1-205ENST00000470167 LVRNQ6Q4G3 990 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 DSTYKQ6XUX3 929 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 TTLL7Q6ZT98 887 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 RAPH1Q70E73 1250 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 LYSMD3Q7Z3D4 306 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 IFNL2Q8IZJ0 200 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 OR8H2Q8N162 312 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 OR8H1Q8NGG4 311 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 GDAP1Q8TB36 358 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 GPR152Q8TDT2 470 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 RBM18Q96H35 190 aaKnown RBP5.68□□□□□ -1.5
COL3A1-205ENST00000470167 DMRTB1Q96MA1 342 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 SAMD11Q96NU1 681 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 GPR101Q96P66 508 aaPredicted RBP5.68□□□□□ -1.5
COL3A1-205ENST00000470167 PSKH2Q96QS6 385 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 CITED4Q96RK1 184 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 ALG1Q9BT22 464 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 USP26Q9BXU7 913 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 NSRP1Q9H0G5 558 aaKnown RBP5.68□□□□□ -1.5
COL3A1-205ENST00000470167 DBNDD1Q9H9R9 158 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 NGRNQ9NPE2 291 aaKnown RBP5.68□□□□□ -1.5
COL3A1-205ENST00000470167 KCNQ5Q9NR82 932 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 SLC5A4Q9NY91 659 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 ZDHHC3Q9NYG2 299 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 HERC5Q9UII4 1024 aaKnown RBP5.68□□□□□ -1.5
COL3A1-205ENST00000470167 AGO2Q9UKV8 859 aaKnown RBP5.68□□□□□ -1.5
COL3A1-205ENST00000470167 TRIM17Q9Y577 477 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 MAPK8IP3Q9UPT6 1336 aa5.68□□□□□ -1.5
COL3A1-205ENST00000470167 CARMIL1Q5VZK9 1371 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 PPIP5K1Q6PFW1 1433 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 MIA2Q96PC5 1412 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 RRBP1Q9P2E9 1410 aaKnown RBP5.67□□□□□ -1.5
COL3A1-205ENST00000470167 A6NCN8 305 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 LACTBL1A8MY62 500 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 TGFBR3LH3BV60 316 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 ELL2O00472 640 aaPredicted RBP5.67□□□□□ -1.5
COL3A1-205ENST00000470167 ENPP3O14638 875 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 TRPA1O75762 1119 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 UBL4AP11441 157 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 ALAS1P13196 640 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 TATP17735 454 aaPredicted RBP5.67□□□□□ -1.5
COL3A1-205ENST00000470167 HOXD12P35452 270 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 STAT3P40763 770 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 MASP1P48740 699 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 CLNS1AP54105 237 aaKnown RBP5.67□□□□□ -1.5
COL3A1-205ENST00000470167 HNRNPUQ00839 825 aaKnown RBP eCLIP5.67□□□□□ -1.5
COL3A1-205ENST00000470167 EHHADHQ08426 723 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 BNIP1Q12981 228 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 DYNC1I2Q13409 638 aaKnown RBP5.67□□□□□ -1.5
COL3A1-205ENST00000470167 SEMA3AQ14563 771 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 DSC3Q14574 896 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 CRY1Q16526 586 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 PABPC1LQ4VXU2 614 aaKnown RBP5.67□□□□□ -1.5
COL3A1-205ENST00000470167 CCDC38Q502W7 563 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 NDUFAF5Q5TEU4 345 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 METTL11BQ5VVY1 283 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 INTS3Q68E01 1043 aaKnown RBP5.67□□□□□ -1.5
COL3A1-205ENST00000470167 HIBCHQ6NVY1 386 aaPredicted RBP5.67□□□□□ -1.5
COL3A1-205ENST00000470167 NEPROQ6NW34 567 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 CAVIN1Q6NZI2 390 aaKnown RBP5.67□□□□□ -1.5
COL3A1-205ENST00000470167 ERAP2Q6P179 960 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 TAOK1Q7L7X3 1001 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 CCDC13Q8IYE1 715 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 GJD3Q8N144 294 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 GALNT15Q8N3T1 639 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 EXOC6Q8TAG9 804 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 AFAP1L1Q8TED9 768 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 NUP133Q8WUM0 1156 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 C7orf43Q8WVR3 580 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 ZNF606Q8WXB4 792 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 GTF3C6Q969F1 213 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 ZKSCAN4Q969J2 545 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms