RNA–Protein interactions for RNA: ENST00000470160.1

KDM3A-210, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 2,955 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-210ENST00000470160 OTOP1Q7RTM1 612 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 VSTM4Q8IW00 320 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 TMEM174Q8WUU8 243 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 WRNIP1Q96S55 665 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 HSD17B14Q9BPX1 270 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 MXRA8Q9BRK3 442 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 KCNF1Q9H3M0 494 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 THAP9Q9H5L6 903 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 RPAP3Q9H6T3 665 aaPredicted RBP7.88□□□□□ -1.15
KDM3A-210ENST00000470160 FBXO28Q9NVF7 368 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 FANCLQ9NW38 375 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.88□□□□□ -1.152e-6■■□□□ 12.5
KDM3A-210ENST00000470160 A0A087WWV3 80 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 MCCD1P59942 119 aaPredicted RBP7.87□□□□□ -1.15
KDM3A-210ENST00000470160 MTMR2Q13614 643 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 COG2Q14746 738 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 CENPPQ6IPU0 288 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 GUF1Q8N442 669 aaKnown RBP7.87□□□□□ -1.15
KDM3A-210ENST00000470160 SYT2Q8N9I0 419 aaPredicted RBP7.87□□□□□ -1.15
KDM3A-210ENST00000470160 ERMNQ8TAM6 284 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 KIAA1524Q8TCG1 905 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 CCDC47Q96A33 483 aaKnown RBP7.87□□□□□ -1.15
KDM3A-210ENST00000470160 KIFC2Q96AC6 838 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 SENP7Q9BQF6 1050 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 NUDT12Q9BQG2 462 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 WDR11Q9BZH6 1224 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 TMX1Q9H3N1 280 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 KCND2Q9NZV8 630 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 ZNF214Q9UL59 606 aaPredicted RBP7.87□□□□□ -1.15
KDM3A-210ENST00000470160 PCDHA2Q9Y5H9 948 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 GLTPD2A6NH11 291 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 DDNO94850 711 aaPredicted RBP7.87□□□□□ -1.15
KDM3A-210ENST00000470160 FECHP22830 423 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 SLC12A3P55017 1021 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 PAK1Q13153 545 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 ARID5BQ14865 1188 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 ECM1Q16610 540 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 USH1GQ495M9 461 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 C9orf131Q5VYM1 1079 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 TTI2Q6NXR4 508 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 MB21D1Q8N884 522 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 RDM1Q8NG50 284 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 SYTL5Q8TDW5 730 aaPredicted RBP7.87□□□□□ -1.15
KDM3A-210ENST00000470160 SNX29Q8TEQ0 813 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 KCNN1Q92952 543 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 FEZ1Q99689 392 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 XPO4Q9C0E2 1151 aaKnown RBP7.87□□□□□ -1.15
KDM3A-210ENST00000470160 HOXC10Q9NYD6 342 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 RNF181Q9P0P0 153 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.87□□□□□ -1.15
KDM3A-210ENST00000470160 CCPG1Q9ULG6 757 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 SYNRGQ9UMZ2 1314 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 NFE2L3Q9Y4A8 694 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 ARID2Q68CP9 1835 aa7.87□□□□□ -1.15
KDM3A-210ENST00000470160 LOC102724159A0A0B4J2E5 919 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 A0A0G2JLL6 359 aaPredicted RBP7.86□□□□□ -1.15
KDM3A-210ENST00000470160 MYMKA6NI61 221 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 GRIN3BO60391 1043 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 MYCNP04198 464 aaPredicted RBP7.86□□□□□ -1.15
KDM3A-210ENST00000470160 CCNE1P24864 410 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 CDC25AP30304 524 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 PRCPP42785 496 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 SPP2Q13103 211 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 IKQ13123 557 aaPredicted RBP7.86□□□□□ -1.15
KDM3A-210ENST00000470160 PWP2Q15269 919 aaKnown RBP7.86□□□□□ -1.15
KDM3A-210ENST00000470160 EPHA7Q15375 998 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 PRRT2Q7Z6L0 340 aaPredicted RBP7.86□□□□□ -1.15
KDM3A-210ENST00000470160 CCDC150Q8NCX0 1101 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 DCPSQ96C86 337 aaKnown RBP7.86□□□□□ -1.15
KDM3A-210ENST00000470160 JADE2Q9NQC1 790 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 INTS13Q9NVM9 706 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 ADD3Q9UEY8 706 aaKnown RBP7.86□□□□□ -1.15
KDM3A-210ENST00000470160 KIAA1217Q5T5P2 1943 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 BICDL2A1A5D9 508 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 POTEMA6NI47 508 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 SPDYE5A6NIY4 337 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 DHX15O43143 795 aaKnown RBP7.86□□□□□ -1.15
KDM3A-210ENST00000470160 EEF1GP26641 437 aaKnown RBP7.86□□□□□ -1.15
KDM3A-210ENST00000470160 NFIL3Q16649 462 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 LDLRAD1Q5T700 205 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 DPY19L2Q6NUT2 758 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 LRRC8AQ8IWT6 810 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 GPATCH11Q8N954 259 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 TBC1D5Q92609 795 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 AGBL1Q96MI9 1066 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 COL20A1Q9P218 1284 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 EYA4O95677 639 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 COPB2P35606 906 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 TERF1P54274 439 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 MARSP56192 900 aaKnown RBP7.86□□□□□ -1.15
KDM3A-210ENST00000470160 SNAP25P60880 206 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 PPIL2Q13356 520 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 STIM1Q13586 685 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 BMT2Q1RMZ1 405 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 CCDC144BQ3MJ40 725 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 KCNK18Q7Z418 384 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 CATSPER3Q86XQ3 398 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 IRF2BP1Q8IU81 584 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 CHST13Q8NET6 341 aa7.86□□□□□ -1.15
KDM3A-210ENST00000470160 ZKSCAN4Q969J2 545 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms