RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 A0A1W2PQJ5 194 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 CTAGE15A4D2H0 777 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 CCDC151A5D8V7 595 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 EIF3CLB5ME19 914 aaKnown RBP16.3■□□□□ 0.2
CBWD3-205ENST00000469687 CTAGE8P0CG41 777 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 LRRC63Q05C16 580 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 USH1GQ495M9 461 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 ZCWPW2Q504Y3 356 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 ZNF771Q7L3S4 317 aaPredicted RBP16.3■□□□□ 0.2
CBWD3-205ENST00000469687 CTAGE6Q86UF2 777 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 C2CD5Q86YS7 1000 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 CTAGE4Q8IX94 777 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 MYOCDQ8IZQ8 938 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 MSANTD4Q8NCY6 345 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 DCAF4Q8WV16 495 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 EIF3CQ99613 913 aaKnown RBP16.3■□□□□ 0.2
CBWD3-205ENST00000469687 KANSL2Q9H9L4 492 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 SUGCTQ9HAC7 445 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 NYAP2Q9P242 653 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 MACROD2A1Z1Q3 448 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 F5H6K3 240 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 MED24O75448 989 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 APBA3O96018 575 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 KLRC3Q07444 240 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 RRP1BQ14684 758 aaKnown RBP16.3■□□□□ 0.2
CBWD3-205ENST00000469687 FAM26FQ5R3K3 315 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 HYIQ5T013 277 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 STRIP1Q5VSL9 837 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 CCDC170Q8IYT3 715 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 IDI2Q9BXS1 227 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 UBXN6Q9BZV1 441 aa16.3■□□□□ 0.2
CBWD3-205ENST00000469687 DHX36Q9H2U1 1008 aaKnown RBP16.3■□□□□ 0.2
CBWD3-205ENST00000469687 TDRD3Q9H7E2 651 aaKnown RBP16.3■□□□□ 0.2
CBWD3-205ENST00000469687 POTEFA5A3E0 1075 aa16.29■□□□□ 0.2
CBWD3-205ENST00000469687 POLR3GO15318 223 aaPredicted RBP16.29■□□□□ 0.2
CBWD3-205ENST00000469687 KRT86O43790 486 aa16.29■□□□□ 0.2
CBWD3-205ENST00000469687 PLA2G4BP0C869 781 aa16.29■□□□□ 0.2
CBWD3-205ENST00000469687 POTEIP0CG38 1075 aa16.29■□□□□ 0.2
CBWD3-205ENST00000469687 CHRNA5P30532 468 aa16.29■□□□□ 0.2
CBWD3-205ENST00000469687 TATDN1Q6P1N9 297 aa16.29■□□□□ 0.2
CBWD3-205ENST00000469687 POTEGQ6S5H5 508 aa16.29■□□□□ 0.2
CBWD3-205ENST00000469687 POTEEQ6S8J3 1075 aa16.29■□□□□ 0.2
CBWD3-205ENST00000469687 NELFCDQ8IXH7 590 aa16.29■□□□□ 0.2
CBWD3-205ENST00000469687 SMCR8Q8TEV9 937 aaPredicted RBP16.29■□□□□ 0.2
CBWD3-205ENST00000469687 RNF216Q9NWF9 866 aaPredicted RBP16.29■□□□□ 0.2
CBWD3-205ENST00000469687 RAB21Q9UL25 225 aa16.29■□□□□ 0.2
CBWD3-205ENST00000469687 PLAGL2Q9UPG8 496 aa16.29■□□□□ 0.2
CBWD3-205ENST00000469687 LRRC53A6NM62 1247 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 NDUFB10O96000 172 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 VSNL1P62760 191 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 PSMD2Q13200 908 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 BRD3Q15059 726 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 AOC3Q16853 763 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 PRR16Q569H4 304 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 BEND6Q5SZJ8 279 aaPredicted RBP16.28■□□□□ 0.2
CBWD3-205ENST00000469687 GPBP1Q86WP2 473 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 CAPZA3Q96KX2 299 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 CCDC42Q96M95 316 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 TRIM34Q9BYJ4 488 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 ZCCHC17Q9NP64 241 aaKnown RBP16.28■□□□□ 0.2
CBWD3-205ENST00000469687 PCDHA2Q9Y5H9 948 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 KDM3AQ9Y4C1 1321 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 TRAF5O00463 557 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 ATP8B1O43520 1251 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 ARHGAP4P98171 946 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 CDK17Q00537 523 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 KCNMA1Q12791 1236 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 ZNF662Q6ZS27 426 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 RRAGAQ7L523 313 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 CRYGNQ8WXF5 182 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 MMS19Q96T76 1030 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 TANGO6Q9C0B7 1094 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 LRRC27Q9C0I9 530 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 NT5C3AQ9H0P0 336 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 ABCB6Q9NP58 842 aa16.28■□□□□ 0.2
CBWD3-205ENST00000469687 CYP3A7-CYP3A51PA0A087WV96 503 aa16.27■□□□□ 0.2
CBWD3-205ENST00000469687 ZNF185O15231 689 aa16.27■□□□□ 0.2
CBWD3-205ENST00000469687 IPO7O95373 1038 aaKnown RBP16.27■□□□□ 0.2
CBWD3-205ENST00000469687 CYP11B2P19099 503 aa16.27■□□□□ 0.2
CBWD3-205ENST00000469687 CYP3A7P24462 503 aa16.27■□□□□ 0.2
CBWD3-205ENST00000469687 HNRNPH3P31942 346 aaKnown RBP16.27■□□□□ 0.2
CBWD3-205ENST00000469687 USP11P51784 963 aa16.27■□□□□ 0.2
CBWD3-205ENST00000469687 VAV2P52735 878 aa16.27■□□□□ 0.2
CBWD3-205ENST00000469687 PSMC6P62333 389 aa16.27■□□□□ 0.2
CBWD3-205ENST00000469687 ABCB5Q2M3G0 1257 aa16.27■□□□□ 0.2
CBWD3-205ENST00000469687 ARSHQ5FYA8 562 aa16.27■□□□□ 0.2
CBWD3-205ENST00000469687 ETNPPLQ8TBG4 499 aa16.27■□□□□ 0.2
CBWD3-205ENST00000469687 BAP1Q92560 729 aa16.27■□□□□ 0.2
CBWD3-205ENST00000469687 PURBQ96QR8 312 aaKnown RBP16.27■□□□□ 0.2
CBWD3-205ENST00000469687 TSG101Q99816 390 aa16.27■□□□□ 0.2
CBWD3-205ENST00000469687 SAR1BQ9Y6B6 198 aa16.27■□□□□ 0.2
CBWD3-205ENST00000469687 ABCB11O95342 1321 aa16.27■□□□□ 0.19
CBWD3-205ENST00000469687 FAM86B1E9PN63 330 aa16.27■□□□□ 0.19
CBWD3-205ENST00000469687 MEIS1O00470 390 aa16.27■□□□□ 0.19
CBWD3-205ENST00000469687 FGFR1OPO95684 399 aaKnown RBP16.27■□□□□ 0.19
CBWD3-205ENST00000469687 GH2P01242 217 aa16.27■□□□□ 0.19
CBWD3-205ENST00000469687 FAM86B2P0C5J1 330 aa16.27■□□□□ 0.19
CBWD3-205ENST00000469687 OAS2P29728 719 aaKnown RBP16.27■□□□□ 0.19
CBWD3-205ENST00000469687 EIF4A3P38919 411 aaKnown RBP16.27■□□□□ 0.19
CBWD3-205ENST00000469687 KIF11P52732 1056 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms