RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 PDE6CP51160 858 aa9.89□□□□□ -0.83
SMARCE1-207ENST00000469334 CCDC152Q4G0S7 254 aa9.89□□□□□ -0.83
SMARCE1-207ENST00000469334 ASRGL1Q7L266 308 aa9.89□□□□□ -0.83
SMARCE1-207ENST00000469334 SPICE1Q8N0Z3 855 aa9.89□□□□□ -0.83
SMARCE1-207ENST00000469334 ARHGAP18Q8N392 663 aa9.89□□□□□ -0.83
SMARCE1-207ENST00000469334 ATXN2LQ8WWM7 1075 aaKnown RBP9.89□□□□□ -0.83
SMARCE1-207ENST00000469334 IFT43Q96FT9 208 aa9.89□□□□□ -0.83
SMARCE1-207ENST00000469334 INPP4AQ96PE3 977 aaPredicted RBP9.89□□□□□ -0.83
SMARCE1-207ENST00000469334 TRIM7Q9C029 511 aa9.89□□□□□ -0.83
SMARCE1-207ENST00000469334 RNPEPL1Q9HAU8 725 aa9.89□□□□□ -0.83
SMARCE1-207ENST00000469334 AGPAT5Q9NUQ2 364 aa9.89□□□□□ -0.83
SMARCE1-207ENST00000469334 VPS54Q9P1Q0 977 aa9.89□□□□□ -0.83
SMARCE1-207ENST00000469334 ATXN10Q9UBB4 475 aa9.89□□□□□ -0.83
SMARCE1-207ENST00000469334 SLC4A7Q9Y6M7 1214 aa9.89□□□□□ -0.83
SMARCE1-207ENST00000469334 NEURL1BA8MQ27 555 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 FOXP2O15409 715 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 TPP2P29144 1249 aaPredicted RBP9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 MMP13P45452 471 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 HAND2P61296 217 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 GCKRQ14397 625 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 DBN1Q16643 649 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 FKBP15Q5T1M5 1219 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 ARMC3Q5W041 872 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 ARHGAP27Q6ZUM4 889 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 ADSSL1Q8N142 457 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 USP38Q8NB14 1042 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 UBLCP1Q8WVY7 318 aaPredicted RBP9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 OPTNQ96CV9 577 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 PGM2Q96G03 612 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 FGD4Q96M96 766 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 NEUROD6Q96NK8 337 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 SLC26A6Q9BXS9 759 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 VCX3BQ9H321 246 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 VCX3AQ9NNX9 186 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 CTTNBP2NLQ9P2B4 639 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 PHRF1Q9P1Y6 1649 aaKnown RBP9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 TIAM2Q8IVF5 1701 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 F8VZ95 297 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 BACH1O14867 736 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 SUN1O94901 812 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 DEXIO95424 95 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 IGKV5-2P06315 115 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 KRT16P08779 473 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 CALB2P22676 271 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 LIFRP42702 1097 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 ERVK-9P63128 1117 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 PARP6Q2NL67 630 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 MICU3Q86XE3 530 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 OSBP2Q969R2 916 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 LTV1Q96GA3 475 aaPredicted RBP9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 RBM17Q96I25 401 aaKnown RBP9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 EPSTI1Q96J88 318 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 CCDC28BQ9BUN5 200 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 MMADHCQ9H3L0 296 aaPredicted RBP9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 DDX21Q9NR30 783 aaKnown RBP eCLIP9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 ABCF3Q9NUQ8 709 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 FBXL5Q9UKA1 691 aa9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 RPL26L1Q9UNX3 145 aaKnown RBP9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 USP15Q9Y4E8 981 aaPredicted RBP9.88□□□□□ -0.83
SMARCE1-207ENST00000469334 SSU72P8A0A1W2PR75 194 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 BTBD11A6QL63 1104 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 RBAK-RBAKDNI3L0D1 243 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 PSMA7O14818 248 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 NCK2O43639 380 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 SNX3O60493 162 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 RPN1P04843 607 aaKnown RBP9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 MYL1P05976 194 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 IFIT1P09914 478 aaKnown RBP9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 CCNB1P14635 433 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 CHN1P15882 459 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 RXRBP28702 533 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 PDE6BP35913 854 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 PPP1R2P41236 205 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 MAGEA1P43355 309 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 RCAN1P53805 252 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 MYBPC3Q14896 1274 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 PABPC1LQ4VXU2 614 aaKnown RBP9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 PDXDC2PQ6P474 469 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 TMEM154Q6P9G4 183 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 TMC3Q7Z5M5 1100 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 ZSCAN29Q8IWY8 852 aaPredicted RBP9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 LRRC34Q8IZ02 419 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 ENDOVQ8N8Q3 282 aaKnown RBP9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 OR2W6PQ8NHA6 318 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 APPBP2Q92624 585 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 PRCCQ92733 491 aaPredicted RBP9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 PSMB7Q99436 277 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 ELAC2Q9BQ52 826 aaKnown RBP9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 SYT15Q9BQS2 421 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 TUBGCP2Q9BSJ2 902 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 STMN4Q9H169 189 aaPredicted RBP9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 FAM217BQ9NTX9 383 aaPredicted RBP9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 PCMTD2Q9NV79 361 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 DNAAF2Q9NVR5 837 aaKnown RBP9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 SCOCQ9UIL1 159 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 MROH7Q68CQ1 1323 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 ARFGEF2Q9Y6D5 1785 aa9.87□□□□□ -0.83
SMARCE1-207ENST00000469334 CCDC188H7C350 402 aa9.86□□□□□ -0.83
SMARCE1-207ENST00000469334 PRPF3O43395 683 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms