RNA–Protein interactions for RNA: ENST00000468876.1

ARHGEF39-202, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-202ENST00000468876 FAM160B2Q86V87 743 aa13.73□□□□□ -0.21
ARHGEF39-202ENST00000468876 FAM133AQ8N9E0 248 aa13.73□□□□□ -0.21
ARHGEF39-202ENST00000468876 CHST13Q8NET6 341 aa13.73□□□□□ -0.21
ARHGEF39-202ENST00000468876 STAG1Q8WVM7 1258 aa13.73□□□□□ -0.21
ARHGEF39-202ENST00000468876 PURBQ96QR8 312 aaKnown RBP13.73□□□□□ -0.21
ARHGEF39-202ENST00000468876 HINFPQ9BQA5 517 aa13.73□□□□□ -0.21
ARHGEF39-202ENST00000468876 MTG1Q9BT17 334 aaPredicted RBP13.73□□□□□ -0.21
ARHGEF39-202ENST00000468876 ACAD9Q9H845 621 aa13.73□□□□□ -0.21
ARHGEF39-202ENST00000468876 PDGFCQ9NRA1 345 aa13.73□□□□□ -0.21
ARHGEF39-202ENST00000468876 SUPT16HQ9Y5B9 1047 aaKnown RBP13.73□□□□□ -0.21
ARHGEF39-202ENST00000468876 ATRXP46100 2492 aa13.72□□□□□ -0.21
ARHGEF39-202ENST00000468876 TET1Q8NFU7 2136 aa13.72□□□□□ -0.21
ARHGEF39-202ENST00000468876 IQSEC1Q6DN90 963 aa13.72□□□□□ -0.21
ARHGEF39-202ENST00000468876 RCSD1Q6JBY9 416 aa13.72□□□□□ -0.21
ARHGEF39-202ENST00000468876 EEPD1Q7L9B9 569 aa13.72□□□□□ -0.21
ARHGEF39-202ENST00000468876 TMEM192Q8IY95 271 aa13.72□□□□□ -0.21
ARHGEF39-202ENST00000468876 MYOCDQ8IZQ8 938 aa13.72□□□□□ -0.21
ARHGEF39-202ENST00000468876 TMEM105Q8N8V8 129 aa13.72□□□□□ -0.21
ARHGEF39-202ENST00000468876 AFAP1L1Q8TED9 768 aa13.72□□□□□ -0.21
ARHGEF39-202ENST00000468876 CHAMP1Q96JM3 812 aa13.72□□□□□ -0.21
ARHGEF39-202ENST00000468876 TMEM47Q9BQJ4 181 aa13.72□□□□□ -0.21
ARHGEF39-202ENST00000468876 FBXO40Q9UH90 709 aa13.72□□□□□ -0.21
ARHGEF39-202ENST00000468876 Q9Y3F1 56 aa13.72□□□□□ -0.21
ARHGEF39-202ENST00000468876 TANC1Q9C0D5 1861 aa13.72□□□□□ -0.21
ARHGEF39-202ENST00000468876 ASB14A6NK59 587 aa13.71□□□□□ -0.21
ARHGEF39-202ENST00000468876 LINC01565O15544 149 aa13.71□□□□□ -0.21
ARHGEF39-202ENST00000468876 SDSP20132 328 aa13.71□□□□□ -0.21
ARHGEF39-202ENST00000468876 GTF2F1P35269 517 aaKnown RBP eCLIP13.71□□□□□ -0.21
ARHGEF39-202ENST00000468876 PURAQ00577 322 aaKnown RBP13.71□□□□□ -0.21
ARHGEF39-202ENST00000468876 CBX2Q14781 532 aaPredicted RBP13.71□□□□□ -0.21
ARHGEF39-202ENST00000468876 TCTN1Q2MV58 587 aa13.71□□□□□ -0.21
ARHGEF39-202ENST00000468876 TMEM63BQ5T3F8 832 aa13.71□□□□□ -0.21
ARHGEF39-202ENST00000468876 LRRC8DQ7L1W4 858 aa13.71□□□□□ -0.21
ARHGEF39-202ENST00000468876 FBXO11Q86XK2 927 aa13.71□□□□□ -0.21
ARHGEF39-202ENST00000468876 FBXO16Q8IX29 292 aaPredicted RBP13.71□□□□□ -0.21
ARHGEF39-202ENST00000468876 DCAF4Q8WV16 495 aa13.71□□□□□ -0.21
ARHGEF39-202ENST00000468876 TRERF1Q96PN7 1200 aa13.71□□□□□ -0.21
ARHGEF39-202ENST00000468876 RWDD1Q9H446 243 aaPredicted RBP13.71□□□□□ -0.21
ARHGEF39-202ENST00000468876 CCPG1Q9ULG6 757 aa13.71□□□□□ -0.21
ARHGEF39-202ENST00000468876 ACACBO00763 2458 aa13.71□□□□□ -0.21
ARHGEF39-202ENST00000468876 NFIBO00712 420 aa13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 PLA2G6O60733 806 aa13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 AMHP03971 560 aa13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 SELPP16109 830 aa13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 PDE4AP27815 886 aa13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 ICAM3P32942 547 aa13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 PTGISQ16647 500 aa13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 PTPN21Q16825 1174 aa13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 CWC27Q6UX04 472 aaKnown RBP13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 SLC30A10Q6XR72 485 aa13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 KIAA1211Q6ZU35 1233 aa13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 CAGE1Q8TC20 777 aa13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 CHURC1Q8WUH1 139 aa13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 YME1L1Q96TA2 773 aa13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 ZKSCAN3Q9BRR0 538 aa13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 RANBP17Q9H2T7 1088 aaKnown RBP13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 CPVLQ9H3G5 476 aa13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 OSBPL3Q9H4L5 887 aa13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 GPCPD1Q9NPB8 672 aa13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 CYP39A1Q9NYL5 469 aa13.7□□□□□ -0.22
ARHGEF39-202ENST00000468876 PDHBP11177 359 aa13.69□□□□□ -0.22
ARHGEF39-202ENST00000468876 TOP1P11387 765 aaKnown RBP13.69□□□□□ -0.22
ARHGEF39-202ENST00000468876 CPT1AP50416 773 aa13.69□□□□□ -0.22
ARHGEF39-202ENST00000468876 IRX6P78412 446 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF39-202ENST00000468876 AAMPQ13685 434 aa13.69□□□□□ -0.22
ARHGEF39-202ENST00000468876 GPNMBQ14956 572 aa13.69□□□□□ -0.22
ARHGEF39-202ENST00000468876 PPP4R3BQ5MIZ7 849 aa13.69□□□□□ -0.22
ARHGEF39-202ENST00000468876 SYDE2Q5VT97 1194 aa13.69□□□□□ -0.22
ARHGEF39-202ENST00000468876 NFRKBQ6P4R8 1299 aa13.69□□□□□ -0.22
ARHGEF39-202ENST00000468876 NSMFQ6X4W1 530 aa13.69□□□□□ -0.22
ARHGEF39-202ENST00000468876 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.69□□□□□ -0.22
ARHGEF39-202ENST00000468876 SP7Q8TDD2 431 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF39-202ENST00000468876 PHF7Q9BWX1 381 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF39-202ENST00000468876 NBNO60934 754 aa13.68□□□□□ -0.22
ARHGEF39-202ENST00000468876 PARNO95453 639 aaKnown RBP13.68□□□□□ -0.22
ARHGEF39-202ENST00000468876 EYA4O95677 639 aa13.68□□□□□ -0.22
ARHGEF39-202ENST00000468876 ICAM1P05362 532 aa13.68□□□□□ -0.22
ARHGEF39-202ENST00000468876 FDX1P10109 184 aa13.68□□□□□ -0.22
ARHGEF39-202ENST00000468876 GSPT1P15170 499 aaKnown RBP13.68□□□□□ -0.22
ARHGEF39-202ENST00000468876 CTNNB1P35222 781 aa13.68□□□□□ -0.22
ARHGEF39-202ENST00000468876 PTPN11Q06124 597 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF39-202ENST00000468876 BRDTQ58F21 947 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF39-202ENST00000468876 BTNL9Q6UXG8 535 aa13.68□□□□□ -0.22
ARHGEF39-202ENST00000468876 DIAPH3Q9NSV4 1193 aa13.68□□□□□ -0.22
ARHGEF39-202ENST00000468876 DLL3Q9NYJ7 618 aa13.68□□□□□ -0.22
ARHGEF39-202ENST00000468876 USP15Q9Y4E8 981 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF39-202ENST00000468876 LMNAP02545 664 aaKnown RBP13.67□□□□□ -0.22
ARHGEF39-202ENST00000468876 CXCL10P02778 98 aa13.67□□□□□ -0.22
ARHGEF39-202ENST00000468876 GOLGA8HP0CJ92 632 aa13.67□□□□□ -0.22
ARHGEF39-202ENST00000468876 SNHG28P0DPA3 235 aa13.67□□□□□ -0.22
ARHGEF39-202ENST00000468876 HTRA4P83105 476 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF39-202ENST00000468876 ZNF543Q08ER8 600 aa13.67□□□□□ -0.22
ARHGEF39-202ENST00000468876 ADAM15Q13444 863 aa13.67□□□□□ -0.22
ARHGEF39-202ENST00000468876 RSPO4Q2I0M5 234 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF39-202ENST00000468876 TKFCQ3LXA3 575 aa13.67□□□□□ -0.22
ARHGEF39-202ENST00000468876 TAPT1Q6NXT6 567 aa13.67□□□□□ -0.22
ARHGEF39-202ENST00000468876 MFSD6Q6ZSS7 791 aa13.67□□□□□ -0.22
ARHGEF39-202ENST00000468876 OR6J1Q8NGC5 347 aa13.67□□□□□ -0.22
ARHGEF39-202ENST00000468876 MSLNLQ96KJ4 702 aa13.67□□□□□ -0.22
ARHGEF39-202ENST00000468876 LMAN2LQ9H0V9 348 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms