RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 SYPP08247 313 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 VAV1P15498 845 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 GRK2P25098 689 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 SSTR4P31391 388 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 CYP2C19P33261 490 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 PDE6BP35913 854 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 PCBP3P57721 371 aaKnown RBP4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 PICALMQ13492 652 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 ZRSR2Q15696 482 aaKnown RBP4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 EFCAB2Q5VUJ9 269 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 CDKAL1Q5VV42 579 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 C16orf59Q7L2K0 433 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 CPNE8Q86YQ8 564 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 CPA6Q8N4T0 437 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 CLRN3Q8NCR9 226 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 TIFAQ96CG3 184 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 SCYL1Q96KG9 808 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 UBL7Q96S82 380 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 CHST12Q9NRB3 414 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 USP25Q9UHP3 1055 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 SAP30BPQ9UHR5 308 aaKnown RBP4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 ZBTB21Q9ULJ3 1066 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 FAM50BQ9Y247 325 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 NPFFR2Q9Y5X5 522 aa4.75□□□□□ -1.65
HMGB1P25-201ENST00000468402 PRR33A8MZF0 331 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 ARNTLO00327 626 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 BMP8BP34820 402 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 GRK3P35626 688 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 TNK2Q07912 1038 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 COBLL1Q53SF7 1204 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 IL31Q6EBC2 164 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 RCSD1Q6JBY9 416 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 OVCH1Q7RTY7 1134 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 CBARPQ8N350 705 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 MFSD4AQ8N468 514 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 C1orf162Q8NEQ5 155 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 USP33Q8TEY7 942 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 EZH1Q92800 747 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 HSPBAP1Q96EW2 488 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 ARPC5LQ9BPX5 153 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 SLC12A9Q9BXP2 914 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 HDAC8Q9BY41 377 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 TRIT1Q9H3H1 467 aaKnown RBP4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 PCIF1Q9H4Z3 704 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 TOMM22Q9NS69 142 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 ATG3Q9NT62 314 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 CLDND1Q9NY35 253 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 PNMA8BQ9ULN7 279 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 INVSQ9Y283 1065 aa4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 TIMM13Q9Y5L4 95 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P25-201ENST00000468402 FRMPD2Q68DX3 1309 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 SLC12A8A0AV02 714 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 KLHL33A6NCF5 533 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 KCNK3O14649 394 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 TBC1D8O95759 1140 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 LTFP02788 710 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 GNAT1P11488 350 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 PDE6AP16499 860 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 VCAM1P19320 739 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 SLC9A1P19634 815 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 LSP1P33241 339 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 BCL6P41182 706 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 NEK3P51956 506 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 ERVK-21P61565 698 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 RPL11P62913 178 aaKnown RBP4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 PURAQ00577 322 aaKnown RBP4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 LSAMPQ13449 338 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 MBTPS1Q14703 1052 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 INF2Q27J81 1249 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 C10orf62Q5T681 223 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 TTLL7Q6ZT98 887 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 BEND4Q6ZU67 534 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 OSTM1Q86WC4 334 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 EFHBQ8N7U6 833 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 SVIPQ8NHG7 77 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 PIWIL2Q8TC59 973 aaKnown RBP4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 WFDC12Q8WWY7 111 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 FAM46AQ96IP4 442 aaKnown RBP4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 TBC1D32Q96NH3 1257 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 BOCQ9BWV1 1114 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 JAM3Q9BX67 310 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 FOXP3Q9BZS1 431 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 SLC13A1Q9BZW2 595 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 SP110Q9HB58 689 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 C1GALT1Q9NS00 363 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 AP5S1Q9NUS5 200 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 PPARGC1AQ9UBK2 798 aaKnown RBP4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 TCFL5Q9UL49 500 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 RNF114Q9Y508 228 aa4.73□□□□□ -1.65
HMGB1P25-201ENST00000468402 HIP1RO75146 1068 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 HSPA6P17066 643 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 TPP2P29144 1249 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 LTKP29376 864 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 NOS3P29474 1203 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 RBM10P98175 930 aaKnown RBP4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 IRF9Q00978 393 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 GTF2H3Q13889 308 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 ODF1Q14990 250 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 VPS72Q15906 364 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms