RNA–Protein interactions for RNA: ENST00000468284.1

CKAP2-205, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 3

Gene CKAP2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-205ENST00000468284 FAM83CQ9BQN1 747 aa11.25□□□□□ -0.61
CKAP2-205ENST00000468284 KCNF1Q9H3M0 494 aa11.25□□□□□ -0.61
CKAP2-205ENST00000468284 SLC45A1Q9Y2W3 748 aa11.25□□□□□ -0.61
CKAP2-205ENST00000468284 PHIPQ8WWQ0 1821 aa11.25□□□□□ -0.61
CKAP2-205ENST00000468284 ATRNL1Q5VV63 1379 aa11.25□□□□□ -0.61
CKAP2-205ENST00000468284 PTPRFP10586 1907 aa11.25□□□□□ -0.61
CKAP2-205ENST00000468284 CCL14Q16627 93 aa11.24□□□□□ -0.61
CKAP2-205ENST00000468284 FAM110CQ1W6H9 321 aa11.24□□□□□ -0.61
CKAP2-205ENST00000468284 CDC42EP5Q6NZY7 148 aa11.24□□□□□ -0.61
CKAP2-205ENST00000468284 FDX2Q6P4F2 183 aa11.24□□□□□ -0.61
CKAP2-205ENST00000468284 LMBR1LQ6UX01 489 aa11.24□□□□□ -0.61
CKAP2-205ENST00000468284 FBXO33Q7Z6M2 555 aa11.24□□□□□ -0.61
CKAP2-205ENST00000468284 TMEM102Q8N9M5 508 aaPredicted RBP11.24□□□□□ -0.61
CKAP2-205ENST00000468284 RUNDC1Q96C34 613 aa11.24□□□□□ -0.61
CKAP2-205ENST00000468284 AGTPBP1Q9UPW5 1226 aa11.24□□□□□ -0.61
CKAP2-205ENST00000468284 DNAH12Q6ZR08 3092 aa11.23□□□□□ -0.61
CKAP2-205ENST00000468284 SMAD3P84022 425 aaKnown RBP11.23□□□□□ -0.61
CKAP2-205ENST00000468284 C19orf57Q0VDD7 668 aa11.23□□□□□ -0.61
CKAP2-205ENST00000468284 UBE4AQ14139 1066 aa11.23□□□□□ -0.61
CKAP2-205ENST00000468284 ALKBH2Q6NS38 261 aa11.23□□□□□ -0.61
CKAP2-205ENST00000468284 BEND4Q6ZU67 534 aa11.23□□□□□ -0.61
CKAP2-205ENST00000468284 BADQ92934 168 aa11.23□□□□□ -0.61
CKAP2-205ENST00000468284 ASB2Q96Q27 587 aa11.23□□□□□ -0.61
CKAP2-205ENST00000468284 OSMRQ99650 979 aa11.23□□□□□ -0.61
CKAP2-205ENST00000468284 PICK1Q9NRD5 415 aa11.23□□□□□ -0.61
CKAP2-205ENST00000468284 POLIQ9UNA4 740 aa11.23□□□□□ -0.61
CKAP2-205ENST00000468284 HIF3AQ9Y2N7 669 aa11.23□□□□□ -0.61
CKAP2-205ENST00000468284 TAF7LQ5H9L4 462 aa11.22□□□□□ -0.61
CKAP2-205ENST00000468284 LCE3BQ5TA77 95 aa11.22□□□□□ -0.61
CKAP2-205ENST00000468284 HGSNATQ68CP4 663 aa11.22□□□□□ -0.61
CKAP2-205ENST00000468284 HHIPL2Q6UWX4 724 aa11.22□□□□□ -0.61
CKAP2-205ENST00000468284 CCER1Q8TC90 406 aaPredicted RBP11.22□□□□□ -0.61
CKAP2-205ENST00000468284 UHRF1Q96T88 793 aaPredicted RBP11.22□□□□□ -0.61
CKAP2-205ENST00000468284 ZKSCAN3Q9BRR0 538 aa11.22□□□□□ -0.61
CKAP2-205ENST00000468284 MRIQ9BWK5 157 aa11.22□□□□□ -0.61
CKAP2-205ENST00000468284 FRMPD3Q5JV73 1810 aa11.21□□□□□ -0.61
CKAP2-205ENST00000468284 SYNGAP1Q96PV0 1343 aa11.21□□□□□ -0.61
CKAP2-205ENST00000468284 PRR19A6NJB7 356 aa11.21□□□□□ -0.61
CKAP2-205ENST00000468284 FRAT2O75474 233 aaPredicted RBP11.21□□□□□ -0.61
CKAP2-205ENST00000468284 SPINK2P20155 84 aa11.21□□□□□ -0.61
CKAP2-205ENST00000468284 IRAK1P51617 712 aa11.21□□□□□ -0.61
CKAP2-205ENST00000468284 EPHB4P54760 987 aa11.21□□□□□ -0.61
CKAP2-205ENST00000468284 GP2P55259 537 aaKnown RBP11.21□□□□□ -0.61
CKAP2-205ENST00000468284 RTP1P59025 263 aa11.21□□□□□ -0.61
CKAP2-205ENST00000468284 MTMR3Q13615 1198 aa11.21□□□□□ -0.61
CKAP2-205ENST00000468284 PDE3AQ14432 1141 aa11.21□□□□□ -0.61
CKAP2-205ENST00000468284 CCDC57Q2TAC2 916 aa11.21□□□□□ -0.61
CKAP2-205ENST00000468284 VPS37DQ86XT2 251 aa11.21□□□□□ -0.61
CKAP2-205ENST00000468284 TBC1D22AQ8WUA7 517 aa11.21□□□□□ -0.61
CKAP2-205ENST00000468284 BSNDQ8WZ55 320 aa11.21□□□□□ -0.61
CKAP2-205ENST00000468284 NXPE3Q969Y0 559 aa11.21□□□□□ -0.61
CKAP2-205ENST00000468284 PRDM5Q9NQX1 630 aaPredicted RBP11.21□□□□□ -0.61
CKAP2-205ENST00000468284 IFT57Q9NWB7 429 aa11.21□□□□□ -0.61
CKAP2-205ENST00000468284 ATP11BQ9Y2G3 1177 aa11.21□□□□□ -0.61
CKAP2-205ENST00000468284 DAGLAQ9Y4D2 1042 aa11.21□□□□□ -0.61
CKAP2-205ENST00000468284 OAS3Q9Y6K5 1087 aaKnown RBP11.21□□□□□ -0.61
CKAP2-205ENST00000468284 EREGO14944 169 aa11.2□□□□□ -0.62
CKAP2-205ENST00000468284 GAS2O43903 313 aaKnown RBP11.2□□□□□ -0.62
CKAP2-205ENST00000468284 PHACTR2O75167 634 aa11.2□□□□□ -0.62
CKAP2-205ENST00000468284 ITGB8P26012 769 aa11.2□□□□□ -0.62
CKAP2-205ENST00000468284 AAMPQ13685 434 aa11.2□□□□□ -0.62
CKAP2-205ENST00000468284 LINS1Q8NG48 757 aa11.2□□□□□ -0.62
CKAP2-205ENST00000468284 SHKBP1Q8TBC3 707 aa11.2□□□□□ -0.62
CKAP2-205ENST00000468284 ATXN2LQ8WWM7 1075 aaKnown RBP11.2□□□□□ -0.62
CKAP2-205ENST00000468284 DNAAF4Q8WXU2 420 aa11.2□□□□□ -0.62
CKAP2-205ENST00000468284 MYH16Q9H6N6 1097 aa11.2□□□□□ -0.62
CKAP2-205ENST00000468284 TXNRD2Q9NNW7 524 aa11.2□□□□□ -0.62
CKAP2-205ENST00000468284 USP40Q9NVE5 1235 aa11.2□□□□□ -0.62
CKAP2-205ENST00000468284 DOCK1Q14185 1865 aa11.19□□□□□ -0.62
CKAP2-205ENST00000468284 DOCK2Q92608 1830 aa11.19□□□□□ -0.62
CKAP2-205ENST00000468284 DDTLA6NHG4 134 aaPredicted RBP11.19□□□□□ -0.62
CKAP2-205ENST00000468284 TNFRSF21O75509 655 aa11.19□□□□□ -0.62
CKAP2-205ENST00000468284 GNAI1P63096 354 aa11.19□□□□□ -0.62
CKAP2-205ENST00000468284 IKBKEQ14164 716 aa11.19□□□□□ -0.62
CKAP2-205ENST00000468284 CCDC85BQ15834 202 aaPredicted RBP11.19□□□□□ -0.62
CKAP2-205ENST00000468284 LRRC24Q50LG9 513 aa11.19□□□□□ -0.62
CKAP2-205ENST00000468284 SNX29Q8TEQ0 813 aa11.19□□□□□ -0.62
CKAP2-205ENST00000468284 TSR2Q969E8 191 aaKnown RBP11.19□□□□□ -0.62
CKAP2-205ENST00000468284 ASCC2Q9H1I8 757 aaPredicted RBP11.19□□□□□ -0.62
CKAP2-205ENST00000468284 FLRT1Q9NZU1 646 aa11.19□□□□□ -0.62
CKAP2-205ENST00000468284 PRKAG2Q9UGJ0 569 aa11.19□□□□□ -0.62
CKAP2-205ENST00000468284 XIRP2A4UGR9 3374 aa11.18□□□□□ -0.62
CKAP2-205ENST00000468284 MEGF11A6BM72 1044 aa11.18□□□□□ -0.62
CKAP2-205ENST00000468284 TRIM43BA6NCK2 446 aa11.18□□□□□ -0.62
CKAP2-205ENST00000468284 F6X3S4 739 aa11.18□□□□□ -0.62
CKAP2-205ENST00000468284 EDN3P14138 238 aa11.18□□□□□ -0.62
CKAP2-205ENST00000468284 ZKSCAN1P17029 563 aaPredicted RBP11.18□□□□□ -0.62
CKAP2-205ENST00000468284 GCLCP48506 637 aaPredicted RBP11.18□□□□□ -0.62
CKAP2-205ENST00000468284 HMGCS2P54868 508 aa11.18□□□□□ -0.62
CKAP2-205ENST00000468284 SPP2Q13103 211 aa11.18□□□□□ -0.62
CKAP2-205ENST00000468284 VN1R5Q7Z5H4 357 aa11.18□□□□□ -0.62
CKAP2-205ENST00000468284 USP6NLQ92738 828 aa11.18□□□□□ -0.62
CKAP2-205ENST00000468284 TRIM43Q96BQ3 446 aaPredicted RBP11.18□□□□□ -0.62
CKAP2-205ENST00000468284 LRFN3Q9BTN0 628 aa11.18□□□□□ -0.62
CKAP2-205ENST00000468284 EPHX3Q9H6B9 360 aa11.18□□□□□ -0.62
CKAP2-205ENST00000468284 THEGQ9P2T0 379 aa11.18□□□□□ -0.62
CKAP2-205ENST00000468284 LRRFIP2Q9Y608 721 aaKnown RBP11.18□□□□□ -0.62
CKAP2-205ENST00000468284 LOC285556D6RIA3 1793 aa11.18□□□□□ -0.62
CKAP2-205ENST00000468284 PAX4O43316 350 aa11.17□□□□□ -0.62
CKAP2-205ENST00000468284 XRCC5P13010 732 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms