RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 CELF3Q5SZQ8 465 aaKnown RBP22.89■■□□□ 1.25
NPHP4-206ENST00000468253 MYSM1Q5VVJ2 828 aa22.89■■□□□ 1.25
NPHP4-206ENST00000468253 NSUN7Q8NE18 718 aaKnown RBP22.89■■□□□ 1.25
NPHP4-206ENST00000468253 COPS5Q92905 334 aa22.89■■□□□ 1.25
NPHP4-206ENST00000468253 ANO3Q9BYT9 981 aa22.89■■□□□ 1.25
NPHP4-206ENST00000468253 PCDHA4Q9UN74 947 aa22.89■■□□□ 1.25
NPHP4-206ENST00000468253 TNRC18O15417 2968 aaPredicted RBP22.89■■□□□ 1.25
NPHP4-206ENST00000468253 FDPSP14324 419 aaKnown RBP22.88■■□□□ 1.25
NPHP4-206ENST00000468253 SP2Q02086 613 aa22.88■■□□□ 1.25
NPHP4-206ENST00000468253 JAKMIP3Q5VZ66 844 aa22.88■■□□□ 1.25
NPHP4-206ENST00000468253 DHX37Q8IY37 1157 aaKnown RBP22.88■■□□□ 1.25
NPHP4-206ENST00000468253 DAGLBQ8NCG7 672 aa22.88■■□□□ 1.25
NPHP4-206ENST00000468253 GIMAP8Q8ND71 665 aaPredicted RBP22.88■■□□□ 1.25
NPHP4-206ENST00000468253 CRYGNQ8WXF5 182 aa22.88■■□□□ 1.25
NPHP4-206ENST00000468253 JADE2Q9NQC1 790 aa22.88■■□□□ 1.25
NPHP4-206ENST00000468253 STARD7Q9NQZ5 370 aa22.88■■□□□ 1.25
NPHP4-206ENST00000468253 PPFIA4O75335 1185 aa22.87■■□□□ 1.25
NPHP4-206ENST00000468253 ITGB5P18084 799 aa22.87■■□□□ 1.25
NPHP4-206ENST00000468253 PTGS1P23219 599 aa22.87■■□□□ 1.25
NPHP4-206ENST00000468253 CDK7P50613 346 aa22.87■■□□□ 1.25
NPHP4-206ENST00000468253 TOX2Q96NM4 488 aa22.87■■□□□ 1.25
NPHP4-206ENST00000468253 MXRA8Q9BRK3 442 aa22.87■■□□□ 1.25
NPHP4-206ENST00000468253 TMEM260Q9NX78 707 aa22.87■■□□□ 1.25
NPHP4-206ENST00000468253 MEIS1O00470 390 aa22.86■■□□□ 1.25
NPHP4-206ENST00000468253 ATN1P54259 1190 aaPredicted RBP22.86■■□□□ 1.25
NPHP4-206ENST00000468253 ARHGAP4P98171 946 aa22.86■■□□□ 1.25
NPHP4-206ENST00000468253 SEMA3FQ13275 785 aa22.86■■□□□ 1.25
NPHP4-206ENST00000468253 CEP55Q53EZ4 464 aa22.86■■□□□ 1.25
NPHP4-206ENST00000468253 NIPA1Q7RTP0 329 aa22.86■■□□□ 1.25
NPHP4-206ENST00000468253 BLIDQ8IZY5 108 aa22.86■■□□□ 1.25
NPHP4-206ENST00000468253 SLC43A3Q8NBI5 491 aa22.86■■□□□ 1.25
NPHP4-206ENST00000468253 PPTC7Q8NI37 304 aa22.86■■□□□ 1.25
NPHP4-206ENST00000468253 AFG1LQ8WV93 481 aa22.86■■□□□ 1.25
NPHP4-206ENST00000468253 VTI1AQ96AJ9 217 aa22.86■■□□□ 1.25
NPHP4-206ENST00000468253 ZFP91Q96JP5 570 aaPredicted RBP22.86■■□□□ 1.25
NPHP4-206ENST00000468253 PHF20Q9BVI0 1012 aa22.86■■□□□ 1.25
NPHP4-206ENST00000468253 M0R2N6 131 aa22.85■■□□□ 1.25
NPHP4-206ENST00000468253 HOXD8P13378 290 aaPredicted RBP22.85■■□□□ 1.25
NPHP4-206ENST00000468253 UBA1P22314 1058 aaKnown RBP22.85■■□□□ 1.25
NPHP4-206ENST00000468253 USP11P51784 963 aa22.85■■□□□ 1.25
NPHP4-206ENST00000468253 RTP1P59025 263 aa22.85■■□□□ 1.25
NPHP4-206ENST00000468253 PURAQ00577 322 aaKnown RBP22.85■■□□□ 1.25
NPHP4-206ENST00000468253 CXCL17Q6UXB2 119 aa22.85■■□□□ 1.25
NPHP4-206ENST00000468253 ANKRD33Q7Z3H0 272 aa22.85■■□□□ 1.25
NPHP4-206ENST00000468253 AIFM3Q96NN9 605 aa22.85■■□□□ 1.25
NPHP4-206ENST00000468253 MTG1Q9BT17 334 aaPredicted RBP22.85■■□□□ 1.25
NPHP4-206ENST00000468253 MLXIPQ9HAP2 919 aa22.85■■□□□ 1.25
NPHP4-206ENST00000468253 A0A0U1RQG5 324 aaPredicted RBP22.84■■□□□ 1.25
NPHP4-206ENST00000468253 ARVCFO00192 962 aa22.84■■□□□ 1.25
NPHP4-206ENST00000468253 ADAMTS3O15072 1205 aa22.84■■□□□ 1.25
NPHP4-206ENST00000468253 GGPS1O95749 300 aa22.84■■□□□ 1.25
NPHP4-206ENST00000468253 CIITAP33076 1130 aa22.84■■□□□ 1.25
NPHP4-206ENST00000468253 ST3GAL1Q11201 340 aa22.84■■□□□ 1.25
NPHP4-206ENST00000468253 MTMR1Q13613 665 aa22.84■■□□□ 1.25
NPHP4-206ENST00000468253 NPY5RQ15761 445 aa22.84■■□□□ 1.25
NPHP4-206ENST00000468253 DGKDQ16760 1214 aa22.84■■□□□ 1.25
NPHP4-206ENST00000468253 METTL7BQ6UX53 244 aa22.84■■□□□ 1.25
NPHP4-206ENST00000468253 ALG1Q9BT22 464 aa22.84■■□□□ 1.25
NPHP4-206ENST00000468253 ZNF76P36508 570 aa22.83■■□□□ 1.25
NPHP4-206ENST00000468253 HMGN5P82970 282 aaKnown RBP22.83■■□□□ 1.25
NPHP4-206ENST00000468253 PRPF38BQ5VTL8 546 aaKnown RBP22.83■■□□□ 1.25
NPHP4-206ENST00000468253 CCDC83Q8IWF9 413 aa22.83■■□□□ 1.25
NPHP4-206ENST00000468253 PGBD1Q96JS3 809 aa22.83■■□□□ 1.25
NPHP4-206ENST00000468253 SPATA33Q96N06 139 aa22.83■■□□□ 1.25
NPHP4-206ENST00000468253 MROH7Q68CQ1 1323 aa22.82■■□□□ 1.24
NPHP4-206ENST00000468253 LRRC37A2A6NM11 1700 aa22.82■■□□□ 1.24
NPHP4-206ENST00000468253 MMP3P08254 477 aa22.82■■□□□ 1.24
NPHP4-206ENST00000468253 MYL3P08590 195 aa22.82■■□□□ 1.24
NPHP4-206ENST00000468253 TLE2Q04725 743 aa22.82■■□□□ 1.24
NPHP4-206ENST00000468253 KCNH7Q9NS40 1196 aa22.82■■□□□ 1.24
NPHP4-206ENST00000468253 KCNJ14Q9UNX9 436 aa22.82■■□□□ 1.24
NPHP4-206ENST00000468253 H0YGN5 161 aa22.81■■□□□ 1.24
NPHP4-206ENST00000468253 JAK2O60674 1132 aa22.81■■□□□ 1.24
NPHP4-206ENST00000468253 ATP9AO75110 1047 aa22.81■■□□□ 1.24
NPHP4-206ENST00000468253 KCNA2P16389 499 aa22.81■■□□□ 1.24
NPHP4-206ENST00000468253 ITGA7Q13683 1181 aa22.81■■□□□ 1.24
NPHP4-206ENST00000468253 HSDL1Q3SXM5 330 aa22.81■■□□□ 1.24
NPHP4-206ENST00000468253 TRIM60Q495X7 471 aa22.81■■□□□ 1.24
NPHP4-206ENST00000468253 CYFIP1Q7L576 1253 aa22.81■■□□□ 1.24
NPHP4-206ENST00000468253 CYP2W1Q8TAV3 490 aa22.81■■□□□ 1.24
NPHP4-206ENST00000468253 RASGRP4Q8TDF6 673 aa22.81■■□□□ 1.24
NPHP4-206ENST00000468253 ATP11BQ9Y2G3 1177 aa22.81■■□□□ 1.24
NPHP4-206ENST00000468253 CEP290O15078 2479 aa22.81■■□□□ 1.24
NPHP4-206ENST00000468253 GRIN2DO15399 1336 aa22.81■■□□□ 1.24
NPHP4-206ENST00000468253 DNAH12Q6ZR08 3092 aa22.8■■□□□ 1.24
NPHP4-206ENST00000468253 FRMPD3Q5JV73 1810 aa22.8■■□□□ 1.24
NPHP4-206ENST00000468253 DCDC2CA8MYV0 355 aa22.8■■□□□ 1.24
NPHP4-206ENST00000468253 KRT25Q7Z3Z0 450 aa22.8■■□□□ 1.24
NPHP4-206ENST00000468253 C7orf61Q8IZ16 206 aa22.8■■□□□ 1.24
NPHP4-206ENST00000468253 TMX3Q96JJ7 454 aa22.8■■□□□ 1.24
NPHP4-206ENST00000468253 CYP3A7-CYP3A51PA0A087WV96 503 aa22.79■■□□□ 1.24
NPHP4-206ENST00000468253 FAM86B1E9PN63 330 aa22.79■■□□□ 1.24
NPHP4-206ENST00000468253 FAM86B2P0C5J1 330 aa22.79■■□□□ 1.24
NPHP4-206ENST00000468253 CYP3A7P24462 503 aa22.79■■□□□ 1.24
NPHP4-206ENST00000468253 PTPN11Q06124 597 aaPredicted RBP22.79■■□□□ 1.24
NPHP4-206ENST00000468253 NFRKBQ6P4R8 1299 aa22.79■■□□□ 1.24
NPHP4-206ENST00000468253 BCAS3Q9H6U6 928 aa22.79■■□□□ 1.24
NPHP4-206ENST00000468253 NFASCO94856 1347 aa22.79■■□□□ 1.24
NPHP4-206ENST00000468253 IGLV3-22A0A075B6J6 115 aa22.78■■□□□ 1.24
NPHP4-206ENST00000468253 EDIL3O43854 480 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms