RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.38□□□□□ -0.59
MSH5-213ENST00000468136 CATSPERGQ6ZRH7 1159 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 PNMA8AQ86V59 439 aaPredicted RBP11.38□□□□□ -0.59
MSH5-213ENST00000468136 FCHSD1Q86WN1 690 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 VSTM4Q8IW00 320 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 LRRC8AQ8IWT6 810 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 GUF1Q8N442 669 aaKnown RBP11.38□□□□□ -0.59
MSH5-213ENST00000468136 PROCA1Q8NCQ7 364 aaPredicted RBP11.38□□□□□ -0.59
MSH5-213ENST00000468136 CLEC4DQ8WXI8 215 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 CDHR1Q96JP9 859 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 MXRA8Q9BRK3 442 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 TEKT3Q9BXF9 490 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 TEX13BQ9BXU2 312 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 TBC1D22BQ9NU19 505 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 FBXO28Q9NVF7 368 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 MAGEC2Q9UBF1 373 aaPredicted RBP11.38□□□□□ -0.59
MSH5-213ENST00000468136 FBXO40Q9UH90 709 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 LIMA1Q9UHB6 759 aaKnown RBP11.38□□□□□ -0.59
MSH5-213ENST00000468136 TCEAL9Q9UHQ7 104 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 A0A087WWV3 80 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 PSMD10O75832 226 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 TPM1P09493 284 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 PLA2G4BP0C869 781 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 SFPQP23246 707 aaKnown RBP eCLIP11.37□□□□□ -0.59
MSH5-213ENST00000468136 PRCPP42785 496 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 SNAP25P60880 206 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 PABPC4Q13310 644 aaKnown RBP eCLIP11.37□□□□□ -0.59
MSH5-213ENST00000468136 EPHA7Q15375 998 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 LRCH2Q5VUJ6 765 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 KLHL10Q6JEL2 608 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 ERO1BQ86YB8 467 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 ANKRD13AQ8IZ07 590 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 CHST13Q8NET6 341 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 RDM1Q8NG50 284 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 KIAA1524Q8TCG1 905 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 GTF3C2Q8WUA4 911 aaPredicted RBP11.37□□□□□ -0.59
MSH5-213ENST00000468136 P2RX5Q93086 422 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 TRERF1Q96PN7 1200 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 TSG101Q99816 390 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 KCND1Q9NSA2 647 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.37□□□□□ -0.59
MSH5-213ENST00000468136 VAV3Q9UKW4 847 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 CTNND2Q9UQB3 1225 aa11.37□□□□□ -0.59
MSH5-213ENST00000468136 ITIH6Q6UXX5 1313 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 GLTPD2A6NH11 291 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 MYMKA6NI61 221 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 B4DLN1 442 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 DKC1O60832 514 aaKnown RBP eCLIP11.36□□□□□ -0.59
MSH5-213ENST00000468136 GAS7O60861 476 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 EYA4O95677 639 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 ALAS1P13196 640 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 CD44P16070 742 aaKnown RBP11.36□□□□□ -0.59
MSH5-213ENST00000468136 PTGS1P23219 599 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 EHHADHQ08426 723 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 MCM6Q14566 821 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 NR1I3Q14994 352 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 SPECC1LQ69YQ0 1117 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 LBX2Q6XYB7 198 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 RNF207Q6ZRF8 634 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 OTOP1Q7RTM1 612 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 ARMC9Q7Z3E5 817 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 NLRX1Q86UT6 975 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 SYT2Q8N9I0 419 aaPredicted RBP11.36□□□□□ -0.59
MSH5-213ENST00000468136 REPS2Q8NFH8 660 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 SYTL5Q8TDW5 730 aaPredicted RBP11.36□□□□□ -0.59
MSH5-213ENST00000468136 DDX12PQ92771 950 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 STAMQ92783 540 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 ZKSCAN4Q969J2 545 aaPredicted RBP11.36□□□□□ -0.59
MSH5-213ENST00000468136 CCDC51Q96ER9 411 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 AGBL1Q96MI9 1066 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 NACC1Q96RE7 527 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 P2RX7Q99572 595 aaKnown RBP11.36□□□□□ -0.59
MSH5-213ENST00000468136 ZNF577Q9BSK1 485 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 JADE2Q9NQC1 790 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 RRAGDQ9NQL2 400 aaPredicted RBP11.36□□□□□ -0.59
MSH5-213ENST00000468136 SPTLC3Q9NUV7 552 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 KIAA1024Q9UPX6 916 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.36□□□□□ -0.591e-9■■■□□ 15.8
MSH5-213ENST00000468136 UBIAD1Q9Y5Z9 338 aa11.36□□□□□ -0.59
MSH5-213ENST00000468136 FRMD3A2A2Y4 597 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 GNA14O95837 355 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 ATP1A3P13637 1013 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 GAP43P17677 238 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 EPHX2P34913 555 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 HMGCS2P54868 508 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 NCAPH2Q6IBW4 605 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 CENPPQ6IPU0 288 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 TMC6Q7Z403 805 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 FILIP1Q7Z7B0 1213 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 CATSPER3Q86XQ3 398 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 CPXCR1Q8N123 301 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 GPRASP2Q96D09 838 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 TRIM47Q96LD4 638 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 IWS1Q96ST2 819 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 PLIN2Q99541 437 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 HSD17B14Q9BPX1 270 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 EIF2AK1Q9BQI3 630 aaKnown RBP11.35□□□□□ -0.59
MSH5-213ENST00000468136 TIPINQ9BVW5 301 aa11.35□□□□□ -0.59
MSH5-213ENST00000468136 NAA15Q9BXJ9 866 aaKnown RBP11.35□□□□□ -0.59
MSH5-213ENST00000468136 ACAD9Q9H845 621 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms