RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 FAM214BQ7L5A3 538 aa6.42□□□□□ -1.38
U2AF1-207ENST00000468039 NLRC3Q7RTR2 1065 aa6.42□□□□□ -1.38
U2AF1-207ENST00000468039 VSIG10LQ86VR7 867 aa6.42□□□□□ -1.38
U2AF1-207ENST00000468039 PLD6Q8N2A8 252 aaKnown RBP6.42□□□□□ -1.38
U2AF1-207ENST00000468039 MFSD4AQ8N468 514 aa6.42□□□□□ -1.38
U2AF1-207ENST00000468039 BAHD1Q8TBE0 780 aaPredicted RBP6.42□□□□□ -1.38
U2AF1-207ENST00000468039 HRASLS5Q96KN8 279 aa6.42□□□□□ -1.38
U2AF1-207ENST00000468039 TEX13AQ9BXU3 409 aaPredicted RBP6.42□□□□□ -1.38
U2AF1-207ENST00000468039 BABAM1Q9NWV8 329 aa6.42□□□□□ -1.38
U2AF1-207ENST00000468039 B8ZZF3 427 aa6.41□□□□□ -1.38
U2AF1-207ENST00000468039 RGS13O14921 159 aa6.41□□□□□ -1.38
U2AF1-207ENST00000468039 SMARCA5O60264 1052 aaPredicted RBP6.41□□□□□ -1.38
U2AF1-207ENST00000468039 CCNFP41002 786 aa6.41□□□□□ -1.38
U2AF1-207ENST00000468039 NASPP49321 788 aaPredicted RBP6.41□□□□□ -1.38
U2AF1-207ENST00000468039 CALD1Q05682 793 aaKnown RBP6.41□□□□□ -1.38
U2AF1-207ENST00000468039 NAALADL2Q58DX5 795 aa6.41□□□□□ -1.38
U2AF1-207ENST00000468039 CDCP2Q5VXM1 449 aa6.41□□□□□ -1.38
U2AF1-207ENST00000468039 TTLL7Q6ZT98 887 aa6.41□□□□□ -1.38
U2AF1-207ENST00000468039 C22orf34Q6ZV56 151 aa6.41□□□□□ -1.38
U2AF1-207ENST00000468039 C8orf58Q8NAV2 365 aa6.41□□□□□ -1.38
U2AF1-207ENST00000468039 NLGN2Q8NFZ4 835 aa6.41□□□□□ -1.38
U2AF1-207ENST00000468039 DNAJB8Q8NHS0 232 aa6.41□□□□□ -1.38
U2AF1-207ENST00000468039 ATG4CQ96DT6 458 aa6.41□□□□□ -1.38
U2AF1-207ENST00000468039 SEC16BQ96JE7 1060 aa6.41□□□□□ -1.38
U2AF1-207ENST00000468039 CHMP4AQ9BY43 222 aa6.41□□□□□ -1.38
U2AF1-207ENST00000468039 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.41□□□□□ -1.38
U2AF1-207ENST00000468039 CNNM2Q9H8M5 875 aa6.41□□□□□ -1.38
U2AF1-207ENST00000468039 NARFQ9UHQ1 456 aa6.41□□□□□ -1.38
U2AF1-207ENST00000468039 KCNH3Q9ULD8 1083 aa6.41□□□□□ -1.38
U2AF1-207ENST00000468039 PPT2Q9UMR5 302 aa6.41□□□□□ -1.38
U2AF1-207ENST00000468039 SLC5A6Q9Y289 635 aa6.41□□□□□ -1.38
U2AF1-207ENST00000468039 SNX11Q9Y5W9 270 aa6.41□□□□□ -1.38
U2AF1-207ENST00000468039 SCN7AQ01118 1682 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 COL24A1Q17RW2 1714 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 A0A087WZG4 1122 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 MEIS3P2A8K0S8 358 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 TCERG1O14776 1098 aaKnown RBP6.4□□□□□ -1.38
U2AF1-207ENST00000468039 DNAJA2O60884 412 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 CAMTA2O94983 1202 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 ZNF865P0CJ78 1059 aaPredicted RBP6.4□□□□□ -1.38
U2AF1-207ENST00000468039 NME1P15531 152 aaKnown RBP6.4□□□□□ -1.38
U2AF1-207ENST00000468039 SOX9P48436 509 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 CLCN7P51798 805 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 EIF6P56537 245 aaKnown RBP6.4□□□□□ -1.38
U2AF1-207ENST00000468039 RNF4P78317 190 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 NFIXQ14938 502 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 SF3A1Q15459 793 aaKnown RBP6.4□□□□□ -1.38
U2AF1-207ENST00000468039 HLFQ16534 295 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 TBC1D9BQ66K14 1250 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 LILRA6Q6PI73 481 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 TSPYL6Q8N831 410 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 FLCNQ8NFG4 579 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 RNF141Q8WVD5 230 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 ASPNQ9BXN1 380 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 SRRTQ9BXP5 876 aaKnown RBP6.4□□□□□ -1.38
U2AF1-207ENST00000468039 CHPF2Q9P2E5 772 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 VAV3Q9UKW4 847 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 STRIP2Q9ULQ0 834 aa6.4□□□□□ -1.38
U2AF1-207ENST00000468039 FANCIQ9NVI1 1328 aa6.4□□□□□ -1.39
U2AF1-207ENST00000468039 POLRMTO00411 1230 aaKnown RBP6.39□□□□□ -1.39
U2AF1-207ENST00000468039 PRNPP04156 253 aa6.39□□□□□ -1.39
U2AF1-207ENST00000468039 PRKCQQ04759 706 aa6.39□□□□□ -1.39
U2AF1-207ENST00000468039 AIMP1Q12904 312 aaKnown RBP6.39□□□□□ -1.39
U2AF1-207ENST00000468039 AOC3Q16853 763 aa6.39□□□□□ -1.39
U2AF1-207ENST00000468039 CDKAL1Q5VV42 579 aa6.39□□□□□ -1.39
U2AF1-207ENST00000468039 CCDC81Q6ZN84 652 aa6.39□□□□□ -1.39
U2AF1-207ENST00000468039 LRP10Q7Z4F1 713 aa6.39□□□□□ -1.39
U2AF1-207ENST00000468039 WDR63Q8IWG1 891 aa6.39□□□□□ -1.39
U2AF1-207ENST00000468039 NLGN1Q8N2Q7 840 aa6.39□□□□□ -1.39
U2AF1-207ENST00000468039 OR6P1Q8NGX9 317 aa6.39□□□□□ -1.39
U2AF1-207ENST00000468039 PPP1R13LQ8WUF5 828 aa6.39□□□□□ -1.39
U2AF1-207ENST00000468039 ASB11Q8WXH4 323 aa6.39□□□□□ -1.39
U2AF1-207ENST00000468039 FBXL18Q96ME1 805 aa6.39□□□□□ -1.39
U2AF1-207ENST00000468039 KREMEN1Q96MU8 473 aa6.39□□□□□ -1.39
U2AF1-207ENST00000468039 TM9SF2Q99805 663 aa6.39□□□□□ -1.39
U2AF1-207ENST00000468039 SYT17Q9BSW7 474 aa6.39□□□□□ -1.39
U2AF1-207ENST00000468039 ANTXR1Q9H6X2 564 aa6.39□□□□□ -1.39
U2AF1-207ENST00000468039 CCDC39Q9UFE4 941 aa6.39□□□□□ -1.39
U2AF1-207ENST00000468039 ZNF521Q96K83 1311 aa6.39□□□□□ -1.39
U2AF1-207ENST00000468039 TNFRSF10CO14798 259 aa6.38□□□□□ -1.39
U2AF1-207ENST00000468039 CLEC3AO75596 197 aa6.38□□□□□ -1.39
U2AF1-207ENST00000468039 JUNBP17275 347 aaPredicted RBP6.38□□□□□ -1.39
U2AF1-207ENST00000468039 TM4SF1P30408 202 aa6.38□□□□□ -1.39
U2AF1-207ENST00000468039 EXOSC9Q06265 439 aaKnown RBP6.38□□□□□ -1.39
U2AF1-207ENST00000468039 KIF6Q6ZMV9 814 aa6.38□□□□□ -1.39
U2AF1-207ENST00000468039 TP53INP2Q8IXH6 220 aa6.38□□□□□ -1.39
U2AF1-207ENST00000468039 RBBP8NLQ8NC74 664 aaPredicted RBP6.38□□□□□ -1.39
U2AF1-207ENST00000468039 PIWIL2Q8TC59 973 aaKnown RBP6.38□□□□□ -1.39
U2AF1-207ENST00000468039 DHRS1Q96LJ7 313 aa6.38□□□□□ -1.39
U2AF1-207ENST00000468039 ASCC2Q9H1I8 757 aaPredicted RBP6.38□□□□□ -1.39
U2AF1-207ENST00000468039 TNKS2Q9H2K2 1166 aa6.38□□□□□ -1.39
U2AF1-207ENST00000468039 TRIT1Q9H3H1 467 aaKnown RBP6.38□□□□□ -1.39
U2AF1-207ENST00000468039 PLAGL2Q9UPG8 496 aa6.38□□□□□ -1.39
U2AF1-207ENST00000468039 CAPN6Q9Y6Q1 641 aa6.38□□□□□ -1.39
U2AF1-207ENST00000468039 IL16Q14005 1332 aa6.38□□□□□ -1.39
U2AF1-207ENST00000468039 CARMIL3Q8ND23 1372 aa6.38□□□□□ -1.39
U2AF1-207ENST00000468039 C10orf71Q711Q0 1435 aa6.38□□□□□ -1.39
U2AF1-207ENST00000468039 BCORQ6W2J9 1755 aa6.38□□□□□ -1.39
U2AF1-207ENST00000468039 MAP3K15Q6ZN16 1313 aa6.37□□□□□ -1.39
U2AF1-207ENST00000468039 PRR33A8MZF0 331 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms