RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 TXNDC5Q8NBS9 432 aaKnown RBP6.54□□□□□ -1.36
SMC4-207ENST00000467263 PMFBP1Q8TBY8 1022 aa6.54□□□□□ -1.36
SMC4-207ENST00000467263 SREK1Q8WXA9 508 aaKnown RBP6.54□□□□□ -1.36
SMC4-207ENST00000467263 HIRIP3Q9BW71 556 aaPredicted RBP6.54□□□□□ -1.36
SMC4-207ENST00000467263 NKX2-4Q9H2Z4 354 aa6.54□□□□□ -1.36
SMC4-207ENST00000467263 FBXL7Q9UJT9 491 aa6.54□□□□□ -1.36
SMC4-207ENST00000467263 MROH6A6NGR9 719 aa6.53□□□□□ -1.36
SMC4-207ENST00000467263 AGRPO00253 132 aa6.53□□□□□ -1.36
SMC4-207ENST00000467263 ECI1P42126 302 aa6.53□□□□□ -1.36
SMC4-207ENST00000467263 SF1Q15637 639 aaKnown RBP6.53□□□□□ -1.36
SMC4-207ENST00000467263 CR1LQ2VPA4 569 aa6.53□□□□□ -1.36
SMC4-207ENST00000467263 DCP2Q8IU60 420 aaKnown RBP6.53□□□□□ -1.36
SMC4-207ENST00000467263 NPLOC4Q8TAT6 608 aa6.53□□□□□ -1.36
SMC4-207ENST00000467263 ARMC5Q96C12 935 aa6.53□□□□□ -1.36
SMC4-207ENST00000467263 SAMD11Q96NU1 681 aa6.53□□□□□ -1.36
SMC4-207ENST00000467263 DNAJC2Q99543 621 aaKnown RBP6.53□□□□□ -1.36
SMC4-207ENST00000467263 C1QTNF3Q9BXJ4 246 aa6.53□□□□□ -1.36
SMC4-207ENST00000467263 CYP26B1Q9NR63 512 aa6.53□□□□□ -1.36
SMC4-207ENST00000467263 TRBV23OR9-2A0A075B6M9 112 aa6.52□□□□□ -1.37
SMC4-207ENST00000467263 A0A1W2PQU0 124 aa6.52□□□□□ -1.37
SMC4-207ENST00000467263 B4GALT3O60512 393 aa6.52□□□□□ -1.37
SMC4-207ENST00000467263 SNRPB2P08579 225 aaKnown RBP6.52□□□□□ -1.37
SMC4-207ENST00000467263 GRIA2P42262 883 aa6.52□□□□□ -1.37
SMC4-207ENST00000467263 KCNJ6P48051 423 aa6.52□□□□□ -1.37
SMC4-207ENST00000467263 PPP2R2AP63151 447 aa6.52□□□□□ -1.37
SMC4-207ENST00000467263 RBL2Q08999 1139 aa6.52□□□□□ -1.37
SMC4-207ENST00000467263 ADAM9Q13443 819 aa6.52□□□□□ -1.37
SMC4-207ENST00000467263 CDSNQ15517 529 aa6.52□□□□□ -1.37
SMC4-207ENST00000467263 NBPF6Q5VWK0 638 aa6.52□□□□□ -1.37
SMC4-207ENST00000467263 MILR1Q7Z6M3 343 aa6.52□□□□□ -1.37
SMC4-207ENST00000467263 NBPF4Q96M43 638 aa6.52□□□□□ -1.37
SMC4-207ENST00000467263 EPN3Q9H201 632 aa6.52□□□□□ -1.37
SMC4-207ENST00000467263 MSRB2Q9Y3D2 182 aa6.52□□□□□ -1.37
SMC4-207ENST00000467263 C1QTNF3-AMACRE9PGA6 284 aa6.51□□□□□ -1.37
SMC4-207ENST00000467263 PRSS53Q2L4Q9 553 aa6.51□□□□□ -1.37
SMC4-207ENST00000467263 FAM26FQ5R3K3 315 aa6.51□□□□□ -1.37
SMC4-207ENST00000467263 SPRED1Q7Z699 444 aa6.51□□□□□ -1.37
SMC4-207ENST00000467263 LGI4Q8N135 537 aa6.51□□□□□ -1.37
SMC4-207ENST00000467263 SLC16A11Q8NCK7 471 aa6.51□□□□□ -1.37
SMC4-207ENST00000467263 ZSWIM3Q96MP5 696 aa6.51□□□□□ -1.37
SMC4-207ENST00000467263 SCAND2PQ9GZW5 306 aaPredicted RBP6.51□□□□□ -1.37
SMC4-207ENST00000467263 AP5M1Q9H0R1 490 aa6.51□□□□□ -1.37
SMC4-207ENST00000467263 WASF3Q9UPY6 502 aa6.51□□□□□ -1.37
SMC4-207ENST00000467263 PDPK1O15530 556 aa6.5□□□□□ -1.37
SMC4-207ENST00000467263 FSHBP01225 129 aa6.5□□□□□ -1.37
SMC4-207ENST00000467263 HOXC12P31275 282 aa6.5□□□□□ -1.37
SMC4-207ENST00000467263 BCL6P41182 706 aa6.5□□□□□ -1.37
SMC4-207ENST00000467263 SPATC1Q76KD6 591 aa6.5□□□□□ -1.37
SMC4-207ENST00000467263 FAM126BQ8IXS8 530 aa6.5□□□□□ -1.37
SMC4-207ENST00000467263 Q8N1X5 172 aa6.5□□□□□ -1.37
SMC4-207ENST00000467263 ST13P5Q8NFI4 369 aaPredicted RBP6.5□□□□□ -1.37
SMC4-207ENST00000467263 SEC14L1Q92503 715 aa6.5□□□□□ -1.37
SMC4-207ENST00000467263 PPP4R1LQ9P1A2 415 aa6.5□□□□□ -1.37
SMC4-207ENST00000467263 SIRPGQ9P1W8 387 aa6.5□□□□□ -1.37
SMC4-207ENST00000467263 ZNF536O15090 1300 aa6.5□□□□□ -1.37
SMC4-207ENST00000467263 GFRA1P56159 465 aa6.49□□□□□ -1.37
SMC4-207ENST00000467263 KIAA2012Q0VF49 1180 aa6.49□□□□□ -1.37
SMC4-207ENST00000467263 SERINC3Q13530 473 aa6.49□□□□□ -1.37
SMC4-207ENST00000467263 ICAM4Q14773 271 aa6.49□□□□□ -1.37
SMC4-207ENST00000467263 MTERF2Q49AM1 385 aa6.49□□□□□ -1.37
SMC4-207ENST00000467263 CEP68Q76N32 757 aa6.49□□□□□ -1.37
SMC4-207ENST00000467263 TTC9BQ8N6N2 239 aa6.49□□□□□ -1.37
SMC4-207ENST00000467263 TTLL6Q8N841 843 aa6.49□□□□□ -1.37
SMC4-207ENST00000467263 TMEM145Q8NBT3 493 aa6.49□□□□□ -1.37
SMC4-207ENST00000467263 MBD6Q96DN6 1003 aa6.49□□□□□ -1.37
SMC4-207ENST00000467263 IER2Q9BTL4 223 aa6.49□□□□□ -1.37
SMC4-207ENST00000467263 PFDN2Q9UHV9 154 aa6.49□□□□□ -1.37
SMC4-207ENST00000467263 IQCA1LA6NCM1 817 aa6.48□□□□□ -1.37
SMC4-207ENST00000467263 ZNF28P17035 718 aa6.48□□□□□ -1.37
SMC4-207ENST00000467263 SLC6A11P48066 632 aa6.48□□□□□ -1.37
SMC4-207ENST00000467263 MLLT6P55198 1093 aaPredicted RBP6.48□□□□□ -1.37
SMC4-207ENST00000467263 RASGRF1Q13972 1273 aa6.48□□□□□ -1.37
SMC4-207ENST00000467263 ARRDC4Q8NCT1 418 aa6.48□□□□□ -1.37
SMC4-207ENST00000467263 KREMEN2Q8NCW0 462 aa6.48□□□□□ -1.37
SMC4-207ENST00000467263 SGSM3Q96HU1 749 aa6.48□□□□□ -1.37
SMC4-207ENST00000467263 DRC1Q96MC2 740 aa6.48□□□□□ -1.37
SMC4-207ENST00000467263 PTPN18Q99952 460 aa6.48□□□□□ -1.37
SMC4-207ENST00000467263 CCDC113Q9H0I3 377 aa6.48□□□□□ -1.37
SMC4-207ENST00000467263 ARHGEF4Q9NR80 690 aa6.48□□□□□ -1.37
SMC4-207ENST00000467263 TIMM13Q9Y5L4 95 aaPredicted RBP6.48□□□□□ -1.37
SMC4-207ENST00000467263 X6R8D5 127 aa6.48□□□□□ -1.37
SMC4-207ENST00000467263 FAM221BA6H8Z2 402 aa6.47□□□□□ -1.37
SMC4-207ENST00000467263 CPP00450 1065 aa6.47□□□□□ -1.37
SMC4-207ENST00000467263 CAPNS1P04632 268 aa6.47□□□□□ -1.37
SMC4-207ENST00000467263 SCG5P05408 212 aa6.47□□□□□ -1.37
SMC4-207ENST00000467263 LCP1P13796 627 aa6.47□□□□□ -1.37
SMC4-207ENST00000467263 HSP90AA2PQ14568 343 aaPredicted RBP6.47□□□□□ -1.37
SMC4-207ENST00000467263 RASA3Q14644 834 aa6.47□□□□□ -1.37
SMC4-207ENST00000467263 DENND5AQ6IQ26 1287 aa6.47□□□□□ -1.37
SMC4-207ENST00000467263 ZC3H18Q86VM9 953 aaKnown RBP6.47□□□□□ -1.37
SMC4-207ENST00000467263 PPIL6Q8IXY8 311 aa6.47□□□□□ -1.37
SMC4-207ENST00000467263 Q8N1Y9 231 aa6.47□□□□□ -1.37
SMC4-207ENST00000467263 RCBTB1Q8NDN9 531 aa6.47□□□□□ -1.37
SMC4-207ENST00000467263 SH3RF3Q8TEJ3 882 aaPredicted RBP6.47□□□□□ -1.37
SMC4-207ENST00000467263 DVL3Q92997 716 aaPredicted RBP6.47□□□□□ -1.37
SMC4-207ENST00000467263 LCORQ96JN0 433 aaPredicted RBP6.47□□□□□ -1.37
SMC4-207ENST00000467263 CCDC140Q96MF4 163 aa6.47□□□□□ -1.37
SMC4-207ENST00000467263 DEPDC7Q96QD5 511 aa6.47□□□□□ -1.37
SMC4-207ENST00000467263 SRPK1Q96SB4 655 aaKnown RBP6.47□□□□□ -1.37
SMC4-207ENST00000467263 AARSD1Q9BTE6 412 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms