RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 NFRKBQ6P4R8 1299 aa18.38■□□□□ 0.53
COL16A1-207ENST00000466829 USP17L6PQ6QN14 398 aa18.38■□□□□ 0.53
COL16A1-207ENST00000466829 TMTC3Q6ZXV5 915 aa18.38■□□□□ 0.53
COL16A1-207ENST00000466829 HEATR3Q7Z4Q2 680 aa18.38■□□□□ 0.53
COL16A1-207ENST00000466829 SPATA33Q96N06 139 aa18.38■□□□□ 0.53
COL16A1-207ENST00000466829 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.38■□□□□ 0.534e-6■■■■■ 37.7
COL16A1-207ENST00000466829 PSTPIP2Q9H939 334 aa18.38■□□□□ 0.53
COL16A1-207ENST00000466829 MLXIPQ9HAP2 919 aa18.38■□□□□ 0.53
COL16A1-207ENST00000466829 RBM28Q9NW13 759 aaKnown RBP18.38■□□□□ 0.53
COL16A1-207ENST00000466829 MYH6P13533 1939 aa18.38■□□□□ 0.53
COL16A1-207ENST00000466829 BAZ2BQ9UIF8 2168 aaKnown RBP18.37■□□□□ 0.53
COL16A1-207ENST00000466829 CPA1P15085 419 aa18.37■□□□□ 0.53
COL16A1-207ENST00000466829 RTN1Q16799 776 aa18.37■□□□□ 0.53
COL16A1-207ENST00000466829 PSRC1Q6PGN9 363 aaPredicted RBP18.37■□□□□ 0.53
COL16A1-207ENST00000466829 APOA5Q6Q788 366 aa18.37■□□□□ 0.53
COL16A1-207ENST00000466829 PPTC7Q8NI37 304 aa18.37■□□□□ 0.53
COL16A1-207ENST00000466829 NOC4LQ9BVI4 516 aaKnown RBP18.37■□□□□ 0.53
COL16A1-207ENST00000466829 RTEL1Q9NZ71 1219 aa18.37■□□□□ 0.53
COL16A1-207ENST00000466829 UMODL1Q5DID0 1318 aa18.37■□□□□ 0.53
COL16A1-207ENST00000466829 KLF18A0A0U1RQI7 1052 aa18.36■□□□□ 0.53
COL16A1-207ENST00000466829 GOLGA8AA7E2F4 631 aa18.36■□□□□ 0.53
COL16A1-207ENST00000466829 GOLGA8BA8MQT2 603 aa18.36■□□□□ 0.53
COL16A1-207ENST00000466829 GGPS1O95749 300 aa18.36■□□□□ 0.53
COL16A1-207ENST00000466829 TGFB3P10600 412 aa18.36■□□□□ 0.53
COL16A1-207ENST00000466829 SMAD3P84022 425 aaKnown RBP18.36■□□□□ 0.53
COL16A1-207ENST00000466829 TMEM240Q5SV17 173 aa18.36■□□□□ 0.53
COL16A1-207ENST00000466829 CELF3Q5SZQ8 465 aaKnown RBP18.36■□□□□ 0.53
COL16A1-207ENST00000466829 ZNF365Q70YC5 407 aa18.36■□□□□ 0.53
COL16A1-207ENST00000466829 C7orf31Q8N865 590 aa18.36■□□□□ 0.53
COL16A1-207ENST00000466829 RETREG2Q8NC44 543 aa18.36■□□□□ 0.53
COL16A1-207ENST00000466829 ALG1Q9BT22 464 aa18.36■□□□□ 0.53
COL16A1-207ENST00000466829 AGXT2Q9BYV1 514 aa18.36■□□□□ 0.53
COL16A1-207ENST00000466829 MTIF3Q9H2K0 278 aaKnown RBP18.36■□□□□ 0.53
COL16A1-207ENST00000466829 IL23AQ9NPF7 189 aa18.36■□□□□ 0.53
COL16A1-207ENST00000466829 MTMR10Q9NXD2 777 aa18.36■□□□□ 0.53
COL16A1-207ENST00000466829 CHMP5Q9NZZ3 219 aa18.36■□□□□ 0.53
COL16A1-207ENST00000466829 BRPF3Q9ULD4 1205 aa18.36■□□□□ 0.53
COL16A1-207ENST00000466829 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.35■□□□□ 0.53
COL16A1-207ENST00000466829 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.35■□□□□ 0.53
COL16A1-207ENST00000466829 STAM2O75886 525 aa18.35■□□□□ 0.53
COL16A1-207ENST00000466829 RGS20O76081 388 aa18.35■□□□□ 0.53
COL16A1-207ENST00000466829 FGBP02675 491 aa18.35■□□□□ 0.53
COL16A1-207ENST00000466829 ZNF286BP0CG31 522 aa18.35■□□□□ 0.53
COL16A1-207ENST00000466829 DDIT3P35638 169 aa18.35■□□□□ 0.53
COL16A1-207ENST00000466829 PTPN11Q06124 597 aaPredicted RBP18.35■□□□□ 0.53
COL16A1-207ENST00000466829 RPUSD2Q8IZ73 545 aaKnown RBP18.35■□□□□ 0.53
COL16A1-207ENST00000466829 SPRYD3Q8NCJ5 442 aa18.35■□□□□ 0.53
COL16A1-207ENST00000466829 GPKOWQ92917 476 aaPredicted RBP eCLIP18.35■□□□□ 0.53
COL16A1-207ENST00000466829 EMID1Q96A84 441 aaPredicted RBP18.35■□□□□ 0.53
COL16A1-207ENST00000466829 SCLYQ96I15 445 aa18.35■□□□□ 0.53
COL16A1-207ENST00000466829 KATNAL1Q9BW62 490 aa18.35■□□□□ 0.53
COL16A1-207ENST00000466829 SLKQ9H2G2 1235 aaPredicted RBP18.35■□□□□ 0.53
COL16A1-207ENST00000466829 SPDYE3A6NKU9 549 aa18.34■□□□□ 0.53
COL16A1-207ENST00000466829 PIK3CDO00329 1044 aa18.34■□□□□ 0.53
COL16A1-207ENST00000466829 NOP56O00567 594 aaKnown RBP18.34■□□□□ 0.53
COL16A1-207ENST00000466829 UBA1P22314 1058 aaKnown RBP18.34■□□□□ 0.53
COL16A1-207ENST00000466829 TOB2Q14106 344 aaPredicted RBP18.34■□□□□ 0.53
COL16A1-207ENST00000466829 PTGISQ16647 500 aa18.34■□□□□ 0.53
COL16A1-207ENST00000466829 MYSM1Q5VVJ2 828 aa18.34■□□□□ 0.53
COL16A1-207ENST00000466829 FAM109BQ6ICB4 259 aaPredicted RBP18.34■□□□□ 0.53
COL16A1-207ENST00000466829 C16orf59Q7L2K0 433 aa18.34■□□□□ 0.53
COL16A1-207ENST00000466829 MEIS2O14770 477 aa18.33■□□□□ 0.52
COL16A1-207ENST00000466829 PPFIA4O75335 1185 aa18.33■□□□□ 0.52
COL16A1-207ENST00000466829 PSEN2P49810 448 aa18.33■□□□□ 0.52
COL16A1-207ENST00000466829 NAPAP54920 295 aa18.33■□□□□ 0.52
COL16A1-207ENST00000466829 SP2Q02086 613 aa18.33■□□□□ 0.52
COL16A1-207ENST00000466829 BFSP2Q13515 415 aa18.33■□□□□ 0.52
COL16A1-207ENST00000466829 MFSD10Q14728 455 aa18.33■□□□□ 0.52
COL16A1-207ENST00000466829 UBE2SQ16763 222 aa18.33■□□□□ 0.52
COL16A1-207ENST00000466829 XRRA1Q6P2D8 792 aa18.33■□□□□ 0.52
COL16A1-207ENST00000466829 Q6ZUG5 572 aa18.33■□□□□ 0.52
COL16A1-207ENST00000466829 OTOP2Q7RTS6 562 aa18.33■□□□□ 0.52
COL16A1-207ENST00000466829 DEFB128Q7Z7B8 93 aa18.33■□□□□ 0.52
COL16A1-207ENST00000466829 NLRX1Q86UT6 975 aa18.33■□□□□ 0.52
COL16A1-207ENST00000466829 WNT8AQ9H1J5 351 aa18.33■□□□□ 0.52
COL16A1-207ENST00000466829 V9GY48 417 aaPredicted RBP18.33■□□□□ 0.52
COL16A1-207ENST00000466829 ZBBXA8MT70 800 aa18.32■□□□□ 0.52
COL16A1-207ENST00000466829 FIBPO43427 364 aa18.32■□□□□ 0.52
COL16A1-207ENST00000466829 METAP2P50579 478 aaKnown RBP eCLIP18.32■□□□□ 0.52
COL16A1-207ENST00000466829 MRPS9P82933 396 aaKnown RBP18.32■□□□□ 0.52
COL16A1-207ENST00000466829 APOBRQ0VD83 1088 aa18.32■□□□□ 0.52
COL16A1-207ENST00000466829 NEDD9Q14511 834 aa18.32■□□□□ 0.52
COL16A1-207ENST00000466829 KIAA0753Q2KHM9 967 aa18.32■□□□□ 0.52
COL16A1-207ENST00000466829 HSDL1Q3SXM5 330 aa18.32■□□□□ 0.52
COL16A1-207ENST00000466829 PCNX4Q63HM2 1172 aa18.32■□□□□ 0.52
COL16A1-207ENST00000466829 CCDC155Q8N6L0 562 aa18.32■□□□□ 0.52
COL16A1-207ENST00000466829 KAT2BQ92831 832 aa18.32■□□□□ 0.52
COL16A1-207ENST00000466829 BRF1Q92994 677 aa18.32■□□□□ 0.52
COL16A1-207ENST00000466829 EHMT1Q9H9B1 1298 aa18.32■□□□□ 0.52
COL16A1-207ENST00000466829 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.32■□□□□ 0.52
COL16A1-207ENST00000466829 FRMPD4Q14CM0 1322 aa18.31■□□□□ 0.52
COL16A1-207ENST00000466829 CCDC196A0A1B0GTZ2 297 aa18.31■□□□□ 0.52
COL16A1-207ENST00000466829 SPATA31C2B4DYI2 1134 aa18.31■□□□□ 0.52
COL16A1-207ENST00000466829 EVCP57679 992 aa18.31■□□□□ 0.52
COL16A1-207ENST00000466829 SP4Q02446 784 aa18.31■□□□□ 0.52
COL16A1-207ENST00000466829 WWC2Q6AWC2 1192 aa18.31■□□□□ 0.52
COL16A1-207ENST00000466829 GDF6Q6KF10 455 aaPredicted RBP18.31■□□□□ 0.52
COL16A1-207ENST00000466829 CYFIP1Q7L576 1253 aa18.31■□□□□ 0.52
COL16A1-207ENST00000466829 INPP4AQ96PE3 977 aaPredicted RBP18.31■□□□□ 0.52
COL16A1-207ENST00000466829 FTOQ9C0B1 505 aaKnown RBP eCLIP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms