RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 BEX3Q00994 111 aa10.85□□□□□ -0.67
SDCCAG3-208ENST00000466579 SP2Q02086 613 aa10.85□□□□□ -0.67
SDCCAG3-208ENST00000466579 LAMC2Q13753 1193 aa10.85□□□□□ -0.67
SDCCAG3-208ENST00000466579 LY6KQ17RY6 165 aa10.85□□□□□ -0.67
SDCCAG3-208ENST00000466579 GNPTABQ3T906 1256 aa10.85□□□□□ -0.67
SDCCAG3-208ENST00000466579 CELF3Q5SZQ8 465 aaKnown RBP10.85□□□□□ -0.67
SDCCAG3-208ENST00000466579 PRPF38BQ5VTL8 546 aaKnown RBP10.85□□□□□ -0.67
SDCCAG3-208ENST00000466579 MYSM1Q5VVJ2 828 aa10.85□□□□□ -0.67
SDCCAG3-208ENST00000466579 GALNT17Q6IS24 598 aa10.85□□□□□ -0.67
SDCCAG3-208ENST00000466579 ANKRD33Q7Z3H0 272 aa10.85□□□□□ -0.67
SDCCAG3-208ENST00000466579 BICD2Q8TD16 824 aa10.85□□□□□ -0.67
SDCCAG3-208ENST00000466579 DPF3Q92784 378 aa10.85□□□□□ -0.67
SDCCAG3-208ENST00000466579 GPRASP2Q96D09 838 aa10.85□□□□□ -0.67
SDCCAG3-208ENST00000466579 SENP7Q9BQF6 1050 aa10.85□□□□□ -0.67
SDCCAG3-208ENST00000466579 ANO3Q9BYT9 981 aa10.85□□□□□ -0.67
SDCCAG3-208ENST00000466579 EHMT1Q9H9B1 1298 aa10.85□□□□□ -0.67
SDCCAG3-208ENST00000466579 VPS54Q9P1Q0 977 aa10.85□□□□□ -0.67
SDCCAG3-208ENST00000466579 NR2E3Q9Y5X4 410 aa10.85□□□□□ -0.67
SDCCAG3-208ENST00000466579 MRVI1Q9Y6F6 885 aa10.85□□□□□ -0.67
SDCCAG3-208ENST00000466579 MAFGO15525 162 aa10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 EVI5O60447 810 aa10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 PPFIA3O75145 1194 aa10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 UBA1P22314 1058 aaKnown RBP10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 RTP1P59025 263 aa10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 PURAQ00577 322 aaKnown RBP10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 NIPA1Q7RTP0 329 aa10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 REXO1Q8N1G1 1221 aaKnown RBP10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 NECAB1Q8N987 351 aa10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 NSUN7Q8NE18 718 aaKnown RBP10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 PPTC7Q8NI37 304 aa10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 FERMT2Q96AC1 680 aa10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 CDHR1Q96JP9 859 aa10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 ZSCAN31Q96LW9 406 aaPredicted RBP10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 GLT1D1Q96MS3 346 aa10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 TOX2Q96NM4 488 aa10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 JADE2Q9NQC1 790 aa10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 STARD7Q9NQZ5 370 aa10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 SH2B1Q9NRF2 756 aaPredicted RBP10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 POLR3EQ9NVU0 708 aa10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 TMEM260Q9NX78 707 aa10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 PCDHA4Q9UN74 947 aa10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 GRIN2DO15399 1336 aa10.84□□□□□ -0.67
SDCCAG3-208ENST00000466579 DOCK5Q9H7D0 1870 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 A0A0U1RQG5 324 aaPredicted RBP10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 H0YGN5 161 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 ARVCFO00192 962 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 MEIS1O00470 390 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 EDIL3O43854 480 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 MMP3P08254 477 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 KCNA2P16389 499 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 CIITAP33076 1130 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 ATN1P54259 1190 aaPredicted RBP10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 ARHGAP4P98171 946 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 NEDD9Q14511 834 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 TRIM60Q495X7 471 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 BRDTQ58F21 947 aaPredicted RBP10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 METTL7BQ6UX53 244 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 CXCL17Q6UXB2 119 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 NLRX1Q86UT6 975 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 AFG1LQ8WV93 481 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 AIFM3Q96NN9 605 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 MXRA8Q9BRK3 442 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 LLPHQ9BRT6 129 aaKnown RBP10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 MTG1Q9BT17 334 aaPredicted RBP10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 PHF20Q9BVI0 1012 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 LTBP2Q14767 1821 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 CEP290O15078 2479 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 MROH7Q68CQ1 1323 aa10.83□□□□□ -0.68
SDCCAG3-208ENST00000466579 PPFIA4O75335 1185 aa10.82□□□□□ -0.68
SDCCAG3-208ENST00000466579 GGPS1O95749 300 aa10.82□□□□□ -0.68
SDCCAG3-208ENST00000466579 NLRP5P59047 1200 aa10.82□□□□□ -0.68
SDCCAG3-208ENST00000466579 TLE2Q04725 743 aa10.82□□□□□ -0.68
SDCCAG3-208ENST00000466579 CEP55Q53EZ4 464 aa10.82□□□□□ -0.68
SDCCAG3-208ENST00000466579 JAKMIP3Q5VZ66 844 aa10.82□□□□□ -0.68
SDCCAG3-208ENST00000466579 DHX37Q8IY37 1157 aaKnown RBP10.82□□□□□ -0.68
SDCCAG3-208ENST00000466579 C7orf61Q8IZ16 206 aa10.82□□□□□ -0.68
SDCCAG3-208ENST00000466579 GIMAP8Q8ND71 665 aaPredicted RBP10.82□□□□□ -0.68
SDCCAG3-208ENST00000466579 WASF1Q92558 559 aa10.82□□□□□ -0.68
SDCCAG3-208ENST00000466579 KAT2BQ92831 832 aa10.82□□□□□ -0.68
SDCCAG3-208ENST00000466579 ZFP91Q96JP5 570 aaPredicted RBP10.82□□□□□ -0.68
SDCCAG3-208ENST00000466579 PGBD1Q96JS3 809 aa10.82□□□□□ -0.68
SDCCAG3-208ENST00000466579 PRO3102Q9H379 93 aa10.82□□□□□ -0.68
SDCCAG3-208ENST00000466579 RTEL1Q9NZ71 1219 aa10.82□□□□□ -0.68
SDCCAG3-208ENST00000466579 ORC3Q9UBD5 711 aaPredicted RBP10.82□□□□□ -0.68
SDCCAG3-208ENST00000466579 IGLV3-22A0A075B6J6 115 aa10.81□□□□□ -0.68
SDCCAG3-208ENST00000466579 HAS3O00219 553 aa10.81□□□□□ -0.68
SDCCAG3-208ENST00000466579 KIAA0355O15063 1070 aa10.81□□□□□ -0.68
SDCCAG3-208ENST00000466579 ST18O60284 1047 aa10.81□□□□□ -0.68
SDCCAG3-208ENST00000466579 JAK2O60674 1132 aa10.81□□□□□ -0.68
SDCCAG3-208ENST00000466579 ATP9AO75110 1047 aa10.81□□□□□ -0.68
SDCCAG3-208ENST00000466579 F2P00734 622 aa10.81□□□□□ -0.68
SDCCAG3-208ENST00000466579 CD4P01730 458 aa10.81□□□□□ -0.68
SDCCAG3-208ENST00000466579 MCM2P49736 904 aa10.81□□□□□ -0.68
SDCCAG3-208ENST00000466579 USP11P51784 963 aa10.81□□□□□ -0.68
SDCCAG3-208ENST00000466579 PTPN11Q06124 597 aaPredicted RBP10.81□□□□□ -0.68
SDCCAG3-208ENST00000466579 MTMR1Q13613 665 aa10.81□□□□□ -0.68
SDCCAG3-208ENST00000466579 ITGA7Q13683 1181 aa10.81□□□□□ -0.68
SDCCAG3-208ENST00000466579 DGKDQ16760 1214 aa10.81□□□□□ -0.68
SDCCAG3-208ENST00000466579 HSDL1Q3SXM5 330 aa10.81□□□□□ -0.68
SDCCAG3-208ENST00000466579 NFRKBQ6P4R8 1299 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms