RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 CCL5P13501 91 aa11.32□□□□□ -0.6
PMF1-204ENST00000466489 CCND2P30279 289 aa11.32□□□□□ -0.6
PMF1-204ENST00000466489 HOXA13P31271 388 aaPredicted RBP11.32□□□□□ -0.6
PMF1-204ENST00000466489 KCNJ6P48051 423 aa11.32□□□□□ -0.6
PMF1-204ENST00000466489 FAM160A1Q05DH4 1040 aa11.32□□□□□ -0.6
PMF1-204ENST00000466489 CACNB2Q08289 660 aaPredicted RBP11.32□□□□□ -0.6
PMF1-204ENST00000466489 STXBP2Q15833 593 aa11.32□□□□□ -0.6
PMF1-204ENST00000466489 CT47A1Q5JQC4 288 aaPredicted RBP11.32□□□□□ -0.6
PMF1-204ENST00000466489 ELOA2Q8IYF1 753 aaPredicted RBP11.32□□□□□ -0.6
PMF1-204ENST00000466489 REXO1Q8N1G1 1221 aaKnown RBP11.32□□□□□ -0.6
PMF1-204ENST00000466489 TRIM5Q9C035 493 aa11.32□□□□□ -0.6
PMF1-204ENST00000466489 ZMYND12Q9H0C1 365 aa11.32□□□□□ -0.6
PMF1-204ENST00000466489 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.32□□□□□ -0.63e-7■■■■■ 42.1
PMF1-204ENST00000466489 VTA1Q9NP79 307 aa11.32□□□□□ -0.6
PMF1-204ENST00000466489 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.32□□□□□ -0.6
PMF1-204ENST00000466489 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.32□□□□□ -0.6
PMF1-204ENST00000466489 SOWAHBA6NEL2 793 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 CCDC85CA6NKD9 419 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 OPLAHO14841 1288 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 SEPT4O43236 478 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 PPFIA3O75145 1194 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 STAM2O75886 525 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 YEATS4O95619 227 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 AKR1A1P14550 325 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 EIF2AK2P19525 551 aaKnown RBP11.31□□□□□ -0.6
PMF1-204ENST00000466489 SAFBQ15424 915 aaKnown RBP eCLIP11.31□□□□□ -0.6
PMF1-204ENST00000466489 PKN1Q16512 942 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 GNPTABQ3T906 1256 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 MAP3K21Q5TCX8 1036 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 XRRA1Q6P2D8 792 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 USP17L6PQ6QN14 398 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 CREBRFQ8IUR6 639 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 NSUN7Q8NE18 718 aaKnown RBP11.31□□□□□ -0.6
PMF1-204ENST00000466489 TIGD1Q96MW7 591 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 ALG1Q9BT22 464 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 CCDC94Q9BW85 323 aaPredicted RBP11.31□□□□□ -0.6
PMF1-204ENST00000466489 SPC25Q9HBM1 224 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 PXMP2Q9NR77 195 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 DACT1Q9NYF0 836 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 FAM13BQ9NYF5 915 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 FLRT1Q9NZU1 646 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 VPS54Q9P1Q0 977 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 PCDH10Q9P2E7 1040 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 FAM184BQ9ULE4 1060 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 LRRC37A2A6NM11 1700 aa11.31□□□□□ -0.6
PMF1-204ENST00000466489 FRMPD3Q5JV73 1810 aa11.3□□□□□ -0.6
PMF1-204ENST00000466489 GJB1P08034 283 aa11.3□□□□□ -0.6
PMF1-204ENST00000466489 NR3C2P08235 984 aa11.3□□□□□ -0.6
PMF1-204ENST00000466489 RARBP10826 455 aa11.3□□□□□ -0.6
PMF1-204ENST00000466489 MYCLP12524 364 aaPredicted RBP11.3□□□□□ -0.6
PMF1-204ENST00000466489 CYBAP13498 195 aa11.3□□□□□ -0.6
PMF1-204ENST00000466489 ACVR2BQ13705 512 aa11.3□□□□□ -0.6
PMF1-204ENST00000466489 SF3A1Q15459 793 aaKnown RBP11.3□□□□□ -0.6
PMF1-204ENST00000466489 ADALQ6DHV7 355 aa11.3□□□□□ -0.6
PMF1-204ENST00000466489 KCNV1Q6PIU1 500 aa11.3□□□□□ -0.6
PMF1-204ENST00000466489 SMAP1Q8IYB5 467 aaPredicted RBP11.3□□□□□ -0.6
PMF1-204ENST00000466489 MORC4Q8TE76 937 aa11.3□□□□□ -0.6
PMF1-204ENST00000466489 SCFD2Q8WU76 684 aa11.3□□□□□ -0.6
PMF1-204ENST00000466489 TBC1D5Q92609 795 aa11.3□□□□□ -0.6
PMF1-204ENST00000466489 TAAR1Q96RJ0 339 aa11.3□□□□□ -0.6
PMF1-204ENST00000466489 UNC93B1Q9H1C4 597 aa11.3□□□□□ -0.6
PMF1-204ENST00000466489 DDX20Q9UHI6 824 aaKnown RBP11.3□□□□□ -0.6
PMF1-204ENST00000466489 PCDHA4Q9UN74 947 aa11.3□□□□□ -0.6
PMF1-204ENST00000466489 MEIS2O14770 477 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 CBFA2T2O43439 604 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 EIF3JO75822 258 aaKnown RBP11.29□□□□□ -0.6
PMF1-204ENST00000466489 CTDNEP1O95476 244 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 SNAI1O95863 264 aaPredicted RBP11.29□□□□□ -0.6
PMF1-204ENST00000466489 TPM1P09493 284 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 EDNRBP24530 442 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 GNL2Q13823 731 aaKnown RBP11.29□□□□□ -0.6
PMF1-204ENST00000466489 TTLL4Q14679 1199 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 PGM5Q15124 567 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 MTFR1Q15390 333 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 UBE2SQ16763 222 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 BRDTQ58F21 947 aaPredicted RBP11.29□□□□□ -0.6
PMF1-204ENST00000466489 EEPD1Q7L9B9 569 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 CDHR1Q96JP9 859 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 C8orf76Q96K31 380 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 FGD4Q96M96 766 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 DEFB118Q96PH6 123 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 PURBQ96QR8 312 aaKnown RBP11.29□□□□□ -0.6
PMF1-204ENST00000466489 PDCD2LQ9BRP1 358 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 GTPBP4Q9BZE4 634 aaKnown RBP11.29□□□□□ -0.6
PMF1-204ENST00000466489 GDPD2Q9HCC8 539 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 PAK6Q9NQU5 681 aaPredicted RBP11.29□□□□□ -0.6
PMF1-204ENST00000466489 RTEL1Q9NZ71 1219 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 COL20A1Q9P218 1284 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 PCDHA6Q9UN73 950 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 PCDHA8Q9Y5H6 950 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 MYH7BA7E2Y1 1941 aa11.29□□□□□ -0.6
PMF1-204ENST00000466489 CCDC194A0A1B0GVG4 234 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 GOLGA6L9A6NEM1 432 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 NKRFO15226 690 aaKnown RBP eCLIP11.28□□□□□ -0.6
PMF1-204ENST00000466489 JAK2O60674 1132 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 TFRCP02786 760 aaKnown RBP11.28□□□□□ -0.6
PMF1-204ENST00000466489 CCND3P30281 292 aaPredicted RBP11.28□□□□□ -0.6
PMF1-204ENST00000466489 KRT2P35908 639 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 ZNF76P36508 570 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms