RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 L1RE1Q9UN81 338 aa7.61□□□□□ -1.19
CDHR3-204ENST00000466351 REXO2Q9Y3B8 237 aaKnown RBP7.61□□□□□ -1.19
CDHR3-204ENST00000466351 AFF2P51816 1311 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 GTPBP10A4D1E9 387 aaKnown RBP7.6□□□□□ -1.19
CDHR3-204ENST00000466351 MYMKA6NI61 221 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 PP2D1A8MPX8 630 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 USP17L5A8MUK1 530 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 B4DLN1 442 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 C6orf229H3BNL8 230 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 PIK3CDO00329 1044 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 ADAMTS3O15072 1205 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 PLA2G6O60733 806 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 ENTPD3O75355 529 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 GABBR2O75899 941 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 GFPT2O94808 682 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 CYP3A4P08684 503 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 TECP42680 631 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 PLA2G4AP47712 749 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 AARSP49588 968 aaKnown RBP eCLIP7.6□□□□□ -1.19
CDHR3-204ENST00000466351 HERVK_113P62684 666 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 DDR1Q08345 913 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 STK4Q13043 487 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 BMT2Q1RMZ1 405 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 Q4G0T1 1027 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 GLE1Q53GS7 698 aaKnown RBP7.6□□□□□ -1.19
CDHR3-204ENST00000466351 MUM1L1Q5H9M0 696 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 FAM26FQ5R3K3 315 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 CCDC122Q5T0U0 273 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 STYK1Q6J9G0 422 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 TATDN1Q6P1N9 297 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 BTNL9Q6UXG8 535 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 PTF1AQ7RTS3 328 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 SEPT12Q8IYM1 358 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 ADGRF4Q8IZF3 695 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 ACRBPQ8NEB7 543 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 FAM71BQ8TC56 605 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 LRRC15Q8TF66 581 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 CPLX3Q8WVH0 158 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 STAMQ92783 540 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 SECISBP2LQ93073 1101 aaKnown RBP7.6□□□□□ -1.19
CDHR3-204ENST00000466351 DNAJC19Q96DA6 116 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 MASTLQ96GX5 879 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 CALR3Q96L12 384 aaKnown RBP7.6□□□□□ -1.19
CDHR3-204ENST00000466351 CCDC42Q96M95 316 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 PNMA5Q96PV4 448 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 SH2D4AQ9H788 454 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 PSTPIP2Q9H939 334 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 NHEJ1Q9H9Q4 299 aaPredicted RBP7.6□□□□□ -1.19
CDHR3-204ENST00000466351 PLCB1Q9NQ66 1216 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 KCND2Q9NZV8 630 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 CALCOCO1Q9P1Z2 691 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 PI4KBQ9UBF8 816 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 PCDHA12Q9UN75 941 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 RABGAP1Q9Y3P9 1069 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 COL4A3BPQ9Y5P4 624 aa7.6□□□□□ -1.19
CDHR3-204ENST00000466351 BZW2Q9Y6E2 419 aaKnown RBP7.6□□□□□ -1.19
CDHR3-204ENST00000466351 A6NNZ2 444 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 SLC16A3O15427 465 aaKnown RBP7.59□□□□□ -1.19
CDHR3-204ENST00000466351 SLC37A4O43826 429 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 GOLGA8HP0CJ92 632 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 AKR1B1P15121 316 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 RPA1P27694 616 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 CDC25AP30304 524 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 SREBF1P36956 1147 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 TXKP42681 527 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 USP14P54578 494 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 KCNQ4P56696 695 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 GTF2IP78347 998 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 COASYQ13057 564 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 SMC1AQ14683 1233 aaKnown RBP7.59□□□□□ -1.19
CDHR3-204ENST00000466351 TUBB8Q3ZCM7 444 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 APOBEC3HQ6NTF7 200 aaKnown RBP7.59□□□□□ -1.19
CDHR3-204ENST00000466351 DPP8Q6V1X1 898 aaPredicted RBP7.59□□□□□ -1.19
CDHR3-204ENST00000466351 TRIM59Q8IWR1 403 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 MMGT1Q8N4V1 131 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 SAMD3Q8N6K7 520 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 TMEM174Q8WUU8 243 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 DDX12PQ92771 950 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 HAS1Q92839 578 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 SLF1Q9BQI6 1058 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 IFIH1Q9BYX4 1025 aaKnown RBP7.59□□□□□ -1.19
CDHR3-204ENST00000466351 DEFB129Q9H1M3 183 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 SEMA6BQ9H3T3 888 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 METTL14Q9HCE5 456 aaKnown RBP7.59□□□□□ -1.19
CDHR3-204ENST00000466351 OLFML3Q9NRN5 406 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 SEL1LQ9UBV2 794 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 BIN2Q9UBW5 565 aaPredicted RBP7.59□□□□□ -1.19
CDHR3-204ENST00000466351 HERC5Q9UII4 1024 aaKnown RBP7.59□□□□□ -1.19
CDHR3-204ENST00000466351 TRAF3IP3Q9Y228 551 aa7.59□□□□□ -1.19
CDHR3-204ENST00000466351 GRID2IPA4D2P6 1211 aa7.58□□□□□ -1.2
CDHR3-204ENST00000466351 RASSF10A6NK89 507 aa7.58□□□□□ -1.2
CDHR3-204ENST00000466351 RNF225M0QZC1 329 aaPredicted RBP7.58□□□□□ -1.2
CDHR3-204ENST00000466351 PDXKO00764 312 aa7.58□□□□□ -1.2
CDHR3-204ENST00000466351 EIF3DO15371 548 aaKnown RBP eCLIP7.58□□□□□ -1.2
CDHR3-204ENST00000466351 EDIL3O43854 480 aa7.58□□□□□ -1.2
CDHR3-204ENST00000466351 RPS6KA5O75582 802 aa7.58□□□□□ -1.2
CDHR3-204ENST00000466351 TDP2O95551 362 aa7.58□□□□□ -1.2
CDHR3-204ENST00000466351 SERPING1P05155 500 aa7.58□□□□□ -1.2
CDHR3-204ENST00000466351 GAP43P17677 238 aa7.58□□□□□ -1.2
CDHR3-204ENST00000466351 RFX1P22670 979 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms