RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 KIF5BP33176 963 aa15.68■□□□□ 0.1
CHD3-207ENST00000466233 KCNJ6P48051 423 aa15.68■□□□□ 0.1
CHD3-207ENST00000466233 GPNMBQ14956 572 aa15.68■□□□□ 0.1
CHD3-207ENST00000466233 KIAA0753Q2KHM9 967 aa15.68■□□□□ 0.1
CHD3-207ENST00000466233 GNPTABQ3T906 1256 aa15.68■□□□□ 0.1
CHD3-207ENST00000466233 IGDCC4Q8TDY8 1250 aa15.68■□□□□ 0.1
CHD3-207ENST00000466233 INPP4AQ96PE3 977 aaPredicted RBP15.68■□□□□ 0.1
CHD3-207ENST00000466233 SPZ1Q9BXG8 430 aa15.68■□□□□ 0.1
CHD3-207ENST00000466233 TNFRSF10AO00220 468 aa15.67■□□□□ 0.1
CHD3-207ENST00000466233 PIK3CDO00329 1044 aa15.67■□□□□ 0.1
CHD3-207ENST00000466233 CYTH3O43739 400 aa15.67■□□□□ 0.1
CHD3-207ENST00000466233 GNAQP50148 359 aa15.67■□□□□ 0.1
CHD3-207ENST00000466233 PTH1RQ03431 593 aa15.67■□□□□ 0.1
CHD3-207ENST00000466233 NEDD9Q14511 834 aa15.67■□□□□ 0.1
CHD3-207ENST00000466233 TRIM71Q2Q1W2 868 aaKnown RBP15.67■□□□□ 0.1
CHD3-207ENST00000466233 CHST3Q7LGC8 479 aa15.67■□□□□ 0.1
CHD3-207ENST00000466233 DHX38Q92620 1227 aaKnown RBP15.67■□□□□ 0.1
CHD3-207ENST00000466233 YTHDC1Q96MU7 727 aaKnown RBP15.67■□□□□ 0.1
CHD3-207ENST00000466233 SPATA33Q96N06 139 aa15.67■□□□□ 0.1
CHD3-207ENST00000466233 PIGSQ96S52 555 aa15.67■□□□□ 0.1
CHD3-207ENST00000466233 SENP7Q9BQF6 1050 aa15.67■□□□□ 0.1
CHD3-207ENST00000466233 C16orf70Q9BSU1 422 aa15.67■□□□□ 0.1
CHD3-207ENST00000466233 USP26Q9BXU7 913 aa15.67■□□□□ 0.1
CHD3-207ENST00000466233 SPTBN5Q9NRC6 3674 aaKnown RBP15.67■□□□□ 0.1
CHD3-207ENST00000466233 TANC1Q9C0D5 1861 aa15.67■□□□□ 0.1
CHD3-207ENST00000466233 DDAH1O94760 285 aa15.66■□□□□ 0.1
CHD3-207ENST00000466233 GGPS1O95749 300 aa15.66■□□□□ 0.1
CHD3-207ENST00000466233 MYCLP12524 364 aaPredicted RBP15.66■□□□□ 0.1
CHD3-207ENST00000466233 MYOGP15173 224 aa15.66■□□□□ 0.1
CHD3-207ENST00000466233 UBA1P22314 1058 aaKnown RBP15.66■□□□□ 0.1
CHD3-207ENST00000466233 WDR5P61964 334 aaKnown RBP15.66■□□□□ 0.1
CHD3-207ENST00000466233 TAP1Q03518 808 aa15.66■□□□□ 0.1
CHD3-207ENST00000466233 IKBKEQ14164 716 aa15.66■□□□□ 0.1
CHD3-207ENST00000466233 SLC35G1Q2M3R5 365 aa15.66■□□□□ 0.1
CHD3-207ENST00000466233 HSDL1Q3SXM5 330 aa15.66■□□□□ 0.1
CHD3-207ENST00000466233 SERINC5Q86VE9 423 aa15.66■□□□□ 0.1
CHD3-207ENST00000466233 RAD9AQ99638 391 aa15.66■□□□□ 0.1
CHD3-207ENST00000466233 MLXIPQ9HAP2 919 aa15.66■□□□□ 0.1
CHD3-207ENST00000466233 COG5Q9UP83 839 aa15.66■□□□□ 0.1
CHD3-207ENST00000466233 MTCH2Q9Y6C9 303 aa15.66■□□□□ 0.1
CHD3-207ENST00000466233 MYO9BQ13459 2157 aa15.65■□□□□ 0.1
CHD3-207ENST00000466233 SPATA31C2B4DYI2 1134 aa15.65■□□□□ 0.1
CHD3-207ENST00000466233 H3BRB1 525 aa15.65■□□□□ 0.1
CHD3-207ENST00000466233 TLL1O43897 1013 aa15.65■□□□□ 0.1
CHD3-207ENST00000466233 NBNO60934 754 aa15.65■□□□□ 0.1
CHD3-207ENST00000466233 GJB5O95377 273 aa15.65■□□□□ 0.1
CHD3-207ENST00000466233 GNAT1P11488 350 aa15.65■□□□□ 0.1
CHD3-207ENST00000466233 HOXA13P31271 388 aaPredicted RBP15.65■□□□□ 0.1
CHD3-207ENST00000466233 SP2Q02086 613 aa15.65■□□□□ 0.1
CHD3-207ENST00000466233 TRAF7Q6Q0C0 670 aa15.65■□□□□ 0.1
CHD3-207ENST00000466233 METTL7BQ6UX53 244 aa15.65■□□□□ 0.1
CHD3-207ENST00000466233 HOMER1Q86YM7 354 aa15.65■□□□□ 0.1
CHD3-207ENST00000466233 MB21D2Q8IYB1 491 aaPredicted RBP15.65■□□□□ 0.1
CHD3-207ENST00000466233 GIMAP8Q8ND71 665 aaPredicted RBP15.65■□□□□ 0.1
CHD3-207ENST00000466233 CTCFLQ8NI51 663 aaPredicted RBP15.65■□□□□ 0.1
CHD3-207ENST00000466233 TMEM87BQ96K49 555 aa15.65■□□□□ 0.1
CHD3-207ENST00000466233 TUT1Q9H6E5 874 aaKnown RBP15.65■□□□□ 0.1
CHD3-207ENST00000466233 SUPT16HQ9Y5B9 1047 aaKnown RBP15.65■□□□□ 0.1
CHD3-207ENST00000466233 TRANK1O15050 2925 aa15.64■□□□□ 0.09
CHD3-207ENST00000466233 FIBPO43427 364 aa15.64■□□□□ 0.09
CHD3-207ENST00000466233 CALM1P0DP23 149 aa15.64■□□□□ 0.09
CHD3-207ENST00000466233 CALM2P0DP24 149 aa15.64■□□□□ 0.09
CHD3-207ENST00000466233 CALM3P0DP25 149 aa15.64■□□□□ 0.09
CHD3-207ENST00000466233 LIFRP42702 1097 aa15.64■□□□□ 0.09
CHD3-207ENST00000466233 PCNX4Q63HM2 1172 aa15.64■□□□□ 0.09
CHD3-207ENST00000466233 IL27Q8NEV9 243 aa15.64■□□□□ 0.09
CHD3-207ENST00000466233 RRP36Q96EU6 259 aaKnown RBP15.64■□□□□ 0.09
CHD3-207ENST00000466233 CDHR1Q96JP9 859 aa15.64■□□□□ 0.09
CHD3-207ENST00000466233 MYH6P13533 1939 aa15.64■□□□□ 0.09
CHD3-207ENST00000466233 LGR5O75473 907 aa15.63■□□□□ 0.09
CHD3-207ENST00000466233 ZNF286BP0CG31 522 aa15.63■□□□□ 0.09
CHD3-207ENST00000466233 MCM5P33992 734 aa15.63■□□□□ 0.09
CHD3-207ENST00000466233 ANTXR2P58335 489 aa15.63■□□□□ 0.09
CHD3-207ENST00000466233 CHMP4BP1P59074 171 aa15.63■□□□□ 0.09
CHD3-207ENST00000466233 MRPS9P82933 396 aaKnown RBP15.63■□□□□ 0.09
CHD3-207ENST00000466233 MKRN4PQ13434 485 aaPredicted RBP15.63■□□□□ 0.09
CHD3-207ENST00000466233 CASC1Q6TDU7 716 aa15.63■□□□□ 0.09
CHD3-207ENST00000466233 FCHSD1Q86WN1 690 aa15.63■□□□□ 0.09
CHD3-207ENST00000466233 IL31RAQ8NI17 732 aa15.63■□□□□ 0.09
CHD3-207ENST00000466233 PPM1EQ8WY54 764 aa15.63■□□□□ 0.09
CHD3-207ENST00000466233 CUL5Q93034 780 aa15.63■□□□□ 0.09
CHD3-207ENST00000466233 ALG1Q9BT22 464 aa15.63■□□□□ 0.09
CHD3-207ENST00000466233 LY9Q9HBG7 655 aa15.63■□□□□ 0.09
CHD3-207ENST00000466233 SEC63Q9UGP8 760 aaKnown RBP15.63■□□□□ 0.09
CHD3-207ENST00000466233 GBF1Q92538 1859 aa15.63■□□□□ 0.09
CHD3-207ENST00000466233 SCN5AQ14524 2016 aa15.62■□□□□ 0.09
CHD3-207ENST00000466233 C17orf102A2RUQ5 167 aa15.62■□□□□ 0.09
CHD3-207ENST00000466233 RSPH10B2B2RC85 870 aa15.62■□□□□ 0.09
CHD3-207ENST00000466233 NOP56O00567 594 aaKnown RBP15.62■□□□□ 0.09
CHD3-207ENST00000466233 MAFGO15525 162 aa15.62■□□□□ 0.09
CHD3-207ENST00000466233 LGALS2P05162 132 aa15.62■□□□□ 0.09
CHD3-207ENST00000466233 RPLP2P05387 115 aaKnown RBP15.62■□□□□ 0.09
CHD3-207ENST00000466233 RSPH10BP0C881 870 aa15.62■□□□□ 0.09
CHD3-207ENST00000466233 BMP1P13497 986 aa15.62■□□□□ 0.09
CHD3-207ENST00000466233 ERVK-21P61565 698 aa15.62■□□□□ 0.09
CHD3-207ENST00000466233 CCDC85BQ15834 202 aaPredicted RBP15.62■□□□□ 0.09
CHD3-207ENST00000466233 ZNF618Q5T7W0 954 aa15.62■□□□□ 0.09
CHD3-207ENST00000466233 FAM43BQ6ZT52 329 aaPredicted RBP15.62■□□□□ 0.09
CHD3-207ENST00000466233 RPAINQ86UA6 219 aa15.62■□□□□ 0.09
CHD3-207ENST00000466233 ZNF654Q8IZM8 581 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms