RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 ZNF592Q92610 1267 aa20.4■□□□□ 0.86
COL9A3-205ENST00000466192 DDX12PQ92771 950 aa20.4■□□□□ 0.86
COL9A3-205ENST00000466192 WDR18Q9BV38 432 aa20.4■□□□□ 0.86
COL9A3-205ENST00000466192 COL11A1P12107 1806 aaPredicted RBP20.4■□□□□ 0.86
COL9A3-205ENST00000466192 PVALEFA0A1B0GWK0 134 aa20.39■□□□□ 0.86
COL9A3-205ENST00000466192 FLOT1O75955 427 aa20.39■□□□□ 0.86
COL9A3-205ENST00000466192 PTPRAP18433 802 aa20.39■□□□□ 0.86
COL9A3-205ENST00000466192 KCNJ6P48051 423 aa20.39■□□□□ 0.86
COL9A3-205ENST00000466192 TC2NQ8N9U0 490 aa20.39■□□□□ 0.86
COL9A3-205ENST00000466192 DHTKD1Q96HY7 919 aaPredicted RBP20.39■□□□□ 0.86
COL9A3-205ENST00000466192 RPAP3Q9H6T3 665 aaPredicted RBP20.39■□□□□ 0.86
COL9A3-205ENST00000466192 SLC38A10Q9HBR0 1119 aa20.39■□□□□ 0.86
COL9A3-205ENST00000466192 LIMA1Q9UHB6 759 aaKnown RBP20.39■□□□□ 0.86
COL9A3-205ENST00000466192 VAV3Q9UKW4 847 aa20.39■□□□□ 0.86
COL9A3-205ENST00000466192 KCNJ18B7U540 433 aa20.39■□□□□ 0.85
COL9A3-205ENST00000466192 RIOK3O14730 519 aaKnown RBP20.39■□□□□ 0.85
COL9A3-205ENST00000466192 SLC26A4O43511 780 aa20.39■□□□□ 0.85
COL9A3-205ENST00000466192 USP14P54578 494 aa20.39■□□□□ 0.85
COL9A3-205ENST00000466192 BACE1P56817 501 aa20.39■□□□□ 0.85
COL9A3-205ENST00000466192 KCNJ12Q14500 433 aa20.39■□□□□ 0.85
COL9A3-205ENST00000466192 TCP11X2Q5H9J9 407 aa20.39■□□□□ 0.85
COL9A3-205ENST00000466192 NCAPH2Q6IBW4 605 aa20.39■□□□□ 0.85
COL9A3-205ENST00000466192 TTI2Q6NXR4 508 aa20.39■□□□□ 0.85
COL9A3-205ENST00000466192 IRF2BP1Q8IU81 584 aa20.39■□□□□ 0.85
COL9A3-205ENST00000466192 CPXCR1Q8N123 301 aa20.39■□□□□ 0.85
COL9A3-205ENST00000466192 CLEC4DQ8WXI8 215 aa20.39■□□□□ 0.85
COL9A3-205ENST00000466192 PPP1R13BQ96KQ4 1090 aa20.39■□□□□ 0.85
COL9A3-205ENST00000466192 PPP1R9AQ9ULJ8 1098 aa20.39■□□□□ 0.85
COL9A3-205ENST00000466192 LRRC10BA6NIK2 292 aa20.38■□□□□ 0.85
COL9A3-205ENST00000466192 NFIBO00712 420 aa20.38■□□□□ 0.85
COL9A3-205ENST00000466192 DDNO94850 711 aaPredicted RBP20.38■□□□□ 0.85
COL9A3-205ENST00000466192 HSD17B4P51659 736 aa20.38■□□□□ 0.85
COL9A3-205ENST00000466192 CATSPER3Q86XQ3 398 aa20.38■□□□□ 0.85
COL9A3-205ENST00000466192 TMEM139Q8IV31 216 aa20.38■□□□□ 0.85
COL9A3-205ENST00000466192 ZNF280CQ8ND82 737 aa20.38■□□□□ 0.85
COL9A3-205ENST00000466192 DNAJC19Q96DA6 116 aa20.38■□□□□ 0.85
COL9A3-205ENST00000466192 LRRC27Q9C0I9 530 aa20.38■□□□□ 0.85
COL9A3-205ENST00000466192 VPS16Q9H269 839 aa20.38■□□□□ 0.85
COL9A3-205ENST00000466192 RAVER2Q9HCJ3 691 aaKnown RBP20.38■□□□□ 0.85
COL9A3-205ENST00000466192 SLC39A2Q9NP94 309 aa20.38■□□□□ 0.85
COL9A3-205ENST00000466192 PICK1Q9NRD5 415 aa20.38■□□□□ 0.85
COL9A3-205ENST00000466192 N4BP3O15049 544 aa20.38■□□□□ 0.85
COL9A3-205ENST00000466192 COBLL1Q53SF7 1204 aa20.38■□□□□ 0.85
COL9A3-205ENST00000466192 HAUS3Q68CZ6 603 aa20.38■□□□□ 0.85
COL9A3-205ENST00000466192 KLRG1Q96E93 195 aa20.38■□□□□ 0.85
COL9A3-205ENST00000466192 GTPBP4Q9BZE4 634 aaKnown RBP20.38■□□□□ 0.85
COL9A3-205ENST00000466192 POTEFA5A3E0 1075 aa20.37■□□□□ 0.85
COL9A3-205ENST00000466192 POTEIP0CG38 1075 aa20.37■□□□□ 0.85
COL9A3-205ENST00000466192 SPATA31C1P0DKV0 1188 aa20.37■□□□□ 0.85
COL9A3-205ENST00000466192 PBX1P40424 430 aa20.37■□□□□ 0.85
COL9A3-205ENST00000466192 SPAG1Q07617 926 aa20.37■□□□□ 0.85
COL9A3-205ENST00000466192 EHHADHQ08426 723 aa20.37■□□□□ 0.85
COL9A3-205ENST00000466192 POTEGQ6S5H5 508 aa20.37■□□□□ 0.85
COL9A3-205ENST00000466192 POTEEQ6S8J3 1075 aa20.37■□□□□ 0.85
COL9A3-205ENST00000466192 P2RX5Q93086 422 aa20.37■□□□□ 0.85
COL9A3-205ENST00000466192 ZFP91Q96JP5 570 aaPredicted RBP20.37■□□□□ 0.85
COL9A3-205ENST00000466192 BAG1Q99933 345 aaPredicted RBP20.37■□□□□ 0.85
COL9A3-205ENST00000466192 DUSP9Q99956 384 aaKnown RBP20.37■□□□□ 0.85
COL9A3-205ENST00000466192 EHMT1Q9H9B1 1298 aa20.37■□□□□ 0.85
COL9A3-205ENST00000466192 AS3MTQ9HBK9 375 aa20.37■□□□□ 0.85
COL9A3-205ENST00000466192 TAB2Q9NYJ8 693 aa20.37■□□□□ 0.85
COL9A3-205ENST00000466192 COL20A1Q9P218 1284 aa20.37■□□□□ 0.85
COL9A3-205ENST00000466192 PPP2R3BQ9Y5P8 575 aa20.37■□□□□ 0.85
COL9A3-205ENST00000466192 DYNC1I1O14576 645 aa20.36■□□□□ 0.85
COL9A3-205ENST00000466192 SSBP05455 408 aaKnown RBP eCLIP20.36■□□□□ 0.85
COL9A3-205ENST00000466192 PLA2G4BP0C869 781 aa20.36■□□□□ 0.85
COL9A3-205ENST00000466192 IDEP14735 1019 aa20.36■□□□□ 0.85
COL9A3-205ENST00000466192 CCNE1P24864 410 aa20.36■□□□□ 0.85
COL9A3-205ENST00000466192 SLC30A10Q6XR72 485 aa20.36■□□□□ 0.85
COL9A3-205ENST00000466192 ANKRD20A12PQ8NF67 263 aa20.36■□□□□ 0.85
COL9A3-205ENST00000466192 TRIM47Q96LD4 638 aa20.36■□□□□ 0.85
COL9A3-205ENST00000466192 ZHX2Q9Y6X8 837 aa20.36■□□□□ 0.85
COL9A3-205ENST00000466192 ALAS1P13196 640 aa20.36■□□□□ 0.85
COL9A3-205ENST00000466192 RPA1P27694 616 aa20.36■□□□□ 0.85
COL9A3-205ENST00000466192 COPB1P53618 953 aaKnown RBP20.36■□□□□ 0.85
COL9A3-205ENST00000466192 ANKRD40Q6AI12 368 aa20.36■□□□□ 0.85
COL9A3-205ENST00000466192 ERMNQ8TAM6 284 aa20.36■□□□□ 0.85
COL9A3-205ENST00000466192 CPLX3Q8WVH0 158 aa20.36■□□□□ 0.85
COL9A3-205ENST00000466192 SRRTQ9BXP5 876 aaKnown RBP20.36■□□□□ 0.85
COL9A3-205ENST00000466192 PPP1R2P41236 205 aa20.35■□□□□ 0.85
COL9A3-205ENST00000466192 RBL2Q08999 1139 aa20.35■□□□□ 0.85
COL9A3-205ENST00000466192 CEP55Q53EZ4 464 aa20.35■□□□□ 0.85
COL9A3-205ENST00000466192 MUM1L1Q5H9M0 696 aa20.35■□□□□ 0.85
COL9A3-205ENST00000466192 PPFIBP1Q86W92 1011 aa20.35■□□□□ 0.85
COL9A3-205ENST00000466192 WNK4Q96J92 1243 aa20.35■□□□□ 0.85
COL9A3-205ENST00000466192 PAXBP1Q9Y5B6 917 aa20.35■□□□□ 0.85
COL9A3-205ENST00000466192 EML1O00423 815 aa20.35■□□□□ 0.85
COL9A3-205ENST00000466192 ARHGAP6O43182 974 aa20.35■□□□□ 0.85
COL9A3-205ENST00000466192 GTF2F1P35269 517 aaKnown RBP eCLIP20.35■□□□□ 0.85
COL9A3-205ENST00000466192 PSMC6P62333 389 aa20.35■□□□□ 0.85
COL9A3-205ENST00000466192 GHRHRQ02643 423 aa20.35■□□□□ 0.85
COL9A3-205ENST00000466192 TSC1Q92574 1164 aa20.35■□□□□ 0.85
COL9A3-205ENST00000466192 SLC5A5Q92911 643 aa20.35■□□□□ 0.85
COL9A3-205ENST00000466192 EEF2KMTQ96G04 330 aa20.35■□□□□ 0.85
COL9A3-205ENST00000466192 THAP9Q9H5L6 903 aa20.35■□□□□ 0.85
COL9A3-205ENST00000466192 HOMER2Q9NSB8 354 aa20.35■□□□□ 0.85
COL9A3-205ENST00000466192 RNF181Q9P0P0 153 aa20.35■□□□□ 0.85
COL9A3-205ENST00000466192 WDR90Q96KV7 1748 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 AKR1B15C9JRZ8 316 aaPredicted RBP20.34■□□□□ 0.85
COL9A3-205ENST00000466192 MEIS1O00470 390 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms