RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 TSEN34Q9BSV6 310 aaKnown RBP8.34□□□□□ -1.07
RPUSD3-212ENST00000466141 TSPYL2Q9H2G4 693 aaPredicted RBP8.34□□□□□ -1.07
RPUSD3-212ENST00000466141 CXorf56Q9H5V9 222 aa8.34□□□□□ -1.07
RPUSD3-212ENST00000466141 CERS4Q9HA82 394 aa8.34□□□□□ -1.07
RPUSD3-212ENST00000466141 FBXO28Q9NVF7 368 aa8.34□□□□□ -1.07
RPUSD3-212ENST00000466141 NRBP1Q9UHY1 535 aa8.34□□□□□ -1.07
RPUSD3-212ENST00000466141 DDX49Q9Y6V7 483 aaKnown RBP8.34□□□□□ -1.07
RPUSD3-212ENST00000466141 LRRC37A2A6NM11 1700 aa8.34□□□□□ -1.07
RPUSD3-212ENST00000466141 MOXD2PA6NHM9 499 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 EPOPA6NHQ4 379 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 HIP1O00291 1037 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 SNAI1O95863 264 aaPredicted RBP8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 ASGR1P07306 291 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 HSPD1P10809 573 aaKnown RBP8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 RASA1P20936 1047 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 CDK8P49336 464 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 CDK7P50613 346 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 IFT88Q13099 833 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 ALX1Q15699 326 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 CCDC144BQ3MJ40 725 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 PPP2R2DQ66LE6 453 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 CCDC174Q6PII3 467 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 KIAA1211Q6ZU35 1233 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 TMEM179Q6ZVK1 233 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 SIAH1Q8IUQ4 282 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 FAM126BQ8IXS8 530 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 PDILTQ8N807 584 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 MB21D1Q8N884 522 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 C1orf131Q8NDD1 294 aaKnown RBP8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 RSPH1Q8WYR4 309 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 HERVK_113Q902F9 699 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 GLT1D1Q96MS3 346 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 NAPBQ9H115 298 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 RETREG1Q9H6L5 497 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 IL23AQ9NPF7 189 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 DIAPH3Q9NSV4 1193 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 CNPY2Q9Y2B0 182 aa8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.33□□□□□ -1.08
RPUSD3-212ENST00000466141 MUC6Q6W4X9 2439 aa8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 PRRC2BQ5JSZ5 2229 aaKnown RBP8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 ARVCFO00192 962 aa8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 SLC25A27O95847 323 aa8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 FGBP02675 491 aa8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 CCDC175P0C221 793 aa8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 C6orf222P0C671 652 aaPredicted RBP8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 ABL2P42684 1182 aa8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 CCL23P55773 120 aa8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 PPARAQ07869 468 aa8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 KCTD2Q14681 263 aa8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 C16orf87Q6PH81 154 aa8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 CWC27Q6UX04 472 aaKnown RBP8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 OTUD6AQ7L8S5 288 aa8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 ZNF467Q7Z7K2 595 aaPredicted RBP8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 HSCBQ8IWL3 235 aa8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 CCDC17Q96LX7 622 aa8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 NACAP1Q9BZK3 213 aa8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 INO80BQ9C086 356 aaPredicted RBP8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 CD320Q9NPF0 282 aa8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 FAM184BQ9ULE4 1060 aa8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 MTCH2Q9Y6C9 303 aa8.32□□□□□ -1.08
RPUSD3-212ENST00000466141 ELP1O95163 1332 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 MROH7Q68CQ1 1323 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 MYH6P13533 1939 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 IGKV6D-41A0A0C4DH26 115 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 MINDY4BA8MYZ0 360 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 HOXA2O43364 376 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 TLL1O43897 1013 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 OFD1O75665 1012 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 ARHGEF15O94989 841 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 CD4P01730 458 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 KCNA2P16389 499 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 PTGS1P23219 599 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 CHMLP26374 656 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 CST5P28325 142 aaPredicted RBP8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 STAT3P40763 770 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 BEX3Q00994 111 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 ICA1Q05084 483 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 PSMD2Q13200 908 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 AAK1Q2M2I8 961 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 BMP2KLQ5H9B9 411 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 MFSD4BQ5TF39 518 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 JAKMIP3Q5VZ66 844 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 PCGF5Q86SE9 256 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 RIOX2Q8IUF8 465 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 IQCF2Q8IXL9 164 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 VPS37AQ8NEZ2 397 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 VWCEQ96DN2 955 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 ZNF396Q96N95 335 aaPredicted RBP8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 HIPK3Q9H422 1215 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 VCPKMTQ9H867 229 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 SUFUQ9UMX1 484 aa8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 DIS3Q9Y2L1 958 aaKnown RBP8.31□□□□□ -1.08
RPUSD3-212ENST00000466141 ZBBXA8MT70 800 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 VWA5AO00534 786 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 TLR3O15455 904 aaKnown RBP8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 GPR37L1O60883 481 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 DUSP11O75319 330 aaKnown RBP8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 PPFIA2O75334 1257 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 PRDM1O75626 825 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms