RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 NIPA1Q7RTP0 329 aa20.97■□□□□ 0.95
HOXA9-203ENST00000465941 TSEN34Q9BSV6 310 aaKnown RBP20.97■□□□□ 0.95
HOXA9-203ENST00000465941 SMC3Q9UQE7 1217 aa20.97■□□□□ 0.95
HOXA9-203ENST00000465941 KBTBD13C9JR72 458 aa20.96■□□□□ 0.95
HOXA9-203ENST00000465941 MEIS1O00470 390 aa20.96■□□□□ 0.95
HOXA9-203ENST00000465941 GH1P01241 217 aa20.96■□□□□ 0.95
HOXA9-203ENST00000465941 GJB2P29033 226 aa20.96■□□□□ 0.95
HOXA9-203ENST00000465941 CIITAP33076 1130 aa20.96■□□□□ 0.95
HOXA9-203ENST00000465941 ZNF76P36508 570 aa20.96■□□□□ 0.95
HOXA9-203ENST00000465941 MTMR1Q13613 665 aa20.96■□□□□ 0.95
HOXA9-203ENST00000465941 NONOQ15233 471 aaKnown RBP eCLIP20.96■□□□□ 0.95
HOXA9-203ENST00000465941 GNASQ5JWF2 1037 aa20.96■□□□□ 0.95
HOXA9-203ENST00000465941 OR6J1Q8NGC5 347 aa20.96■□□□□ 0.95
HOXA9-203ENST00000465941 CYP2W1Q8TAV3 490 aa20.96■□□□□ 0.95
HOXA9-203ENST00000465941 TBCKQ8TEA7 893 aa20.96■□□□□ 0.95
HOXA9-203ENST00000465941 COPS5Q92905 334 aa20.96■□□□□ 0.95
HOXA9-203ENST00000465941 TNFRSF25Q93038 417 aa20.96■□□□□ 0.95
HOXA9-203ENST00000465941 EMID1Q96A84 441 aaPredicted RBP20.96■□□□□ 0.95
HOXA9-203ENST00000465941 INTS4Q96HW7 963 aaKnown RBP20.96■□□□□ 0.95
HOXA9-203ENST00000465941 SENP7Q9BQF6 1050 aa20.96■□□□□ 0.95
HOXA9-203ENST00000465941 CCDC194A0A1B0GVG4 234 aa20.95■□□□□ 0.94
HOXA9-203ENST00000465941 MYADML2A6NDP7 307 aa20.95■□□□□ 0.94
HOXA9-203ENST00000465941 BTBD18B2RXH4 712 aa20.95■□□□□ 0.94
HOXA9-203ENST00000465941 FAM86B1E9PN63 330 aa20.95■□□□□ 0.94
HOXA9-203ENST00000465941 EDIL3O43854 480 aa20.95■□□□□ 0.94
HOXA9-203ENST00000465941 MYCNP04198 464 aaPredicted RBP20.95■□□□□ 0.94
HOXA9-203ENST00000465941 FAM86B2P0C5J1 330 aa20.95■□□□□ 0.94
HOXA9-203ENST00000465941 COL6A1P12109 1028 aa20.95■□□□□ 0.94
HOXA9-203ENST00000465941 FOSBP53539 338 aa20.95■□□□□ 0.94
HOXA9-203ENST00000465941 IRX5P78411 483 aaPredicted RBP20.95■□□□□ 0.94
HOXA9-203ENST00000465941 ARHGAP1Q07960 439 aa20.95■□□□□ 0.94
HOXA9-203ENST00000465941 LAMC2Q13753 1193 aa20.95■□□□□ 0.94
HOXA9-203ENST00000465941 SAFBQ15424 915 aaKnown RBP eCLIP20.95■□□□□ 0.94
HOXA9-203ENST00000465941 KCNA10Q16322 511 aa20.95■□□□□ 0.94
HOXA9-203ENST00000465941 FSCN1Q16658 493 aaKnown RBP20.95■□□□□ 0.94
HOXA9-203ENST00000465941 CELF3Q5SZQ8 465 aaKnown RBP20.95■□□□□ 0.94
HOXA9-203ENST00000465941 NECAB2Q7Z6G3 386 aa20.95■□□□□ 0.94
HOXA9-203ENST00000465941 HSCBQ8IWL3 235 aa20.95■□□□□ 0.94
HOXA9-203ENST00000465941 DIS3L2Q8IYB7 885 aaKnown RBP20.95■□□□□ 0.94
HOXA9-203ENST00000465941 PCSK9Q8NBP7 692 aaKnown RBP20.95■□□□□ 0.94
HOXA9-203ENST00000465941 DIS3LQ8TF46 1054 aaKnown RBP20.95■□□□□ 0.94
HOXA9-203ENST00000465941 PAWRQ96IZ0 340 aaKnown RBP20.95■□□□□ 0.94
HOXA9-203ENST00000465941 KIAA0100Q14667 2235 aaKnown RBP20.94■□□□□ 0.94
HOXA9-203ENST00000465941 MOXD2PA6NHM9 499 aa20.94■□□□□ 0.94
HOXA9-203ENST00000465941 A6NJR5 290 aa20.94■□□□□ 0.94
HOXA9-203ENST00000465941 UBA1P22314 1058 aaKnown RBP20.94■□□□□ 0.94
HOXA9-203ENST00000465941 CPT1AP50416 773 aa20.94■□□□□ 0.94
HOXA9-203ENST00000465941 GUCY1B3Q02153 619 aa20.94■□□□□ 0.94
HOXA9-203ENST00000465941 NR5A1Q13285 461 aa20.94■□□□□ 0.94
HOXA9-203ENST00000465941 NEDD9Q14511 834 aa20.94■□□□□ 0.94
HOXA9-203ENST00000465941 MYSM1Q5VVJ2 828 aa20.94■□□□□ 0.94
HOXA9-203ENST00000465941 DHX37Q8IY37 1157 aaKnown RBP20.94■□□□□ 0.94
HOXA9-203ENST00000465941 GIMAP8Q8ND71 665 aaPredicted RBP20.94■□□□□ 0.94
HOXA9-203ENST00000465941 C11orf49Q9H6J7 331 aa20.94■□□□□ 0.94
HOXA9-203ENST00000465941 KCNH7Q9NS40 1196 aa20.94■□□□□ 0.94
HOXA9-203ENST00000465941 PHF24Q9UPV7 400 aa20.94■□□□□ 0.94
HOXA9-203ENST00000465941 FRMPD3Q5JV73 1810 aa20.94■□□□□ 0.94
HOXA9-203ENST00000465941 KIAA1217Q5T5P2 1943 aa20.94■□□□□ 0.94
HOXA9-203ENST00000465941 IGLV3-22A0A075B6J6 115 aa20.93■□□□□ 0.94
HOXA9-203ENST00000465941 CYP3A7-CYP3A51PA0A087WV96 503 aa20.93■□□□□ 0.94
HOXA9-203ENST00000465941 ZEB2O60315 1214 aa20.93■□□□□ 0.94
HOXA9-203ENST00000465941 GGPS1O95749 300 aa20.93■□□□□ 0.94
HOXA9-203ENST00000465941 CYP3A7P24462 503 aa20.93■□□□□ 0.94
HOXA9-203ENST00000465941 ACLYP53396 1101 aa20.93■□□□□ 0.94
HOXA9-203ENST00000465941 BEX3Q00994 111 aa20.93■□□□□ 0.94
HOXA9-203ENST00000465941 BRDTQ58F21 947 aaPredicted RBP20.93■□□□□ 0.94
HOXA9-203ENST00000465941 PIK3AP1Q6ZUJ8 805 aa20.93■□□□□ 0.94
HOXA9-203ENST00000465941 FOXP1Q9H334 677 aaPredicted RBP20.93■□□□□ 0.94
HOXA9-203ENST00000465941 ATP9AO75110 1047 aa20.92■□□□□ 0.94
HOXA9-203ENST00000465941 ASGR1P07306 291 aa20.92■□□□□ 0.94
HOXA9-203ENST00000465941 ARP10275 920 aa20.92■□□□□ 0.94
HOXA9-203ENST00000465941 KCNA2P16389 499 aa20.92■□□□□ 0.94
HOXA9-203ENST00000465941 INF2Q27J81 1249 aa20.92■□□□□ 0.94
HOXA9-203ENST00000465941 EARS2Q5JPH6 523 aaKnown RBP20.92■□□□□ 0.94
HOXA9-203ENST00000465941 MOXD1Q6UVY6 613 aa20.92■□□□□ 0.94
HOXA9-203ENST00000465941 METTL7BQ6UX53 244 aa20.92■□□□□ 0.94
HOXA9-203ENST00000465941 PLA2G4DQ86XP0 818 aa20.92■□□□□ 0.94
HOXA9-203ENST00000465941 PPTC7Q8NI37 304 aa20.92■□□□□ 0.94
HOXA9-203ENST00000465941 AFG1LQ8WV93 481 aa20.92■□□□□ 0.94
HOXA9-203ENST00000465941 MLXIPQ9HAP2 919 aa20.92■□□□□ 0.94
HOXA9-203ENST00000465941 KPNA6O60684 536 aa20.91■□□□□ 0.94
HOXA9-203ENST00000465941 SETQ01105 290 aaPredicted RBP20.91■□□□□ 0.94
HOXA9-203ENST00000465941 BCAS3Q9H6U6 928 aa20.91■□□□□ 0.94
HOXA9-203ENST00000465941 AGO4Q9HCK5 861 aaKnown RBP20.91■□□□□ 0.94
HOXA9-203ENST00000465941 PRR16Q569H4 304 aa20.9■□□□□ 0.94
HOXA9-203ENST00000465941 CYFIP1Q7L576 1253 aa20.9■□□□□ 0.94
HOXA9-203ENST00000465941 NEK8Q86SG6 692 aa20.9■□□□□ 0.94
HOXA9-203ENST00000465941 LENG9Q96B70 501 aa20.9■□□□□ 0.94
HOXA9-203ENST00000465941 SPATA33Q96N06 139 aa20.9■□□□□ 0.94
HOXA9-203ENST00000465941 MBOAT7Q96N66 472 aa20.9■□□□□ 0.94
HOXA9-203ENST00000465941 NAP1L4Q99733 375 aaKnown RBP20.9■□□□□ 0.94
HOXA9-203ENST00000465941 SENP6Q9GZR1 1112 aaPredicted RBP20.9■□□□□ 0.94
HOXA9-203ENST00000465941 POLR3EQ9NVU0 708 aa20.9■□□□□ 0.94
HOXA9-203ENST00000465941 NFASCO94856 1347 aa20.89■□□□□ 0.93
HOXA9-203ENST00000465941 A0A1W2PQ45 241 aaPredicted RBP20.89■□□□□ 0.93
HOXA9-203ENST00000465941 A0A1W2PQY0 241 aa20.89■□□□□ 0.93
HOXA9-203ENST00000465941 PPFIA4O75335 1185 aa20.89■□□□□ 0.93
HOXA9-203ENST00000465941 CABYRO75952 493 aa20.89■□□□□ 0.93
HOXA9-203ENST00000465941 HOXD8P13378 290 aaPredicted RBP20.89■□□□□ 0.93
HOXA9-203ENST00000465941 U2AF2P26368 475 aaKnown RBP eCLIP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms