RNA–Protein interactions for RNA: ENST00000465743.2

COL2A1-203, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 4

Gene COL2A1, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-203ENST00000465743 ZBTB43O43298 467 aa23.21■■□□□ 1.31
COL2A1-203ENST00000465743 FUT2Q10981 343 aa23.21■■□□□ 1.31
COL2A1-203ENST00000465743 DGKDQ16760 1214 aa23.21■■□□□ 1.31
COL2A1-203ENST00000465743 CELF3Q5SZQ8 465 aaKnown RBP23.21■■□□□ 1.31
COL2A1-203ENST00000465743 ZNF697Q5TEC3 545 aa23.21■■□□□ 1.31
COL2A1-203ENST00000465743 MYSM1Q5VVJ2 828 aa23.21■■□□□ 1.31
COL2A1-203ENST00000465743 SYNE3Q6ZMZ3 975 aa23.21■■□□□ 1.31
COL2A1-203ENST00000465743 CUL5Q93034 780 aa23.21■■□□□ 1.31
COL2A1-203ENST00000465743 SPATA33Q96N06 139 aa23.21■■□□□ 1.31
COL2A1-203ENST00000465743 CTAGE1Q96RT6 745 aa23.21■■□□□ 1.31
COL2A1-203ENST00000465743 TTYH1Q9H313 450 aaPredicted RBP23.21■■□□□ 1.31
COL2A1-203ENST00000465743 NAP1L2Q9ULW6 460 aaPredicted RBP23.21■■□□□ 1.31
COL2A1-203ENST00000465743 TELO2Q9Y4R8 837 aa23.21■■□□□ 1.31
COL2A1-203ENST00000465743 CHD9Q3L8U1 2897 aa23.2■■□□□ 1.3
COL2A1-203ENST00000465743 TET1Q8NFU7 2136 aa23.2■■□□□ 1.3
COL2A1-203ENST00000465743 PIK3CDO00329 1044 aa23.2■■□□□ 1.3
COL2A1-203ENST00000465743 LAMC2Q13753 1193 aa23.2■■□□□ 1.3
COL2A1-203ENST00000465743 WWC2Q6AWC2 1192 aa23.2■■□□□ 1.3
COL2A1-203ENST00000465743 GDF6Q6KF10 455 aaPredicted RBP23.2■■□□□ 1.3
COL2A1-203ENST00000465743 TYW1BQ6NUM6 668 aa23.2■■□□□ 1.3
COL2A1-203ENST00000465743 PSRC1Q6PGN9 363 aaPredicted RBP23.2■■□□□ 1.3
COL2A1-203ENST00000465743 INPP4AQ96PE3 977 aaPredicted RBP23.2■■□□□ 1.3
COL2A1-203ENST00000465743 ALG1Q9BT22 464 aa23.2■■□□□ 1.3
COL2A1-203ENST00000465743 USP26Q9BXU7 913 aa23.2■■□□□ 1.3
COL2A1-203ENST00000465743 UNC80Q8N2C7 3258 aa23.19■■□□□ 1.3
COL2A1-203ENST00000465743 F2P00734 622 aa23.19■■□□□ 1.3
COL2A1-203ENST00000465743 HMGB1P09429 215 aaKnown RBP23.19■■□□□ 1.3
COL2A1-203ENST00000465743 CASTP20810 708 aaKnown RBP23.19■■□□□ 1.3
COL2A1-203ENST00000465743 CDC27P30260 824 aa23.19■■□□□ 1.3
COL2A1-203ENST00000465743 PSEN2P49810 448 aa23.19■■□□□ 1.3
COL2A1-203ENST00000465743 APOBRQ0VD83 1088 aa23.19■■□□□ 1.3
COL2A1-203ENST00000465743 MFSD10Q14728 455 aa23.19■■□□□ 1.3
COL2A1-203ENST00000465743 RASIP1Q5U651 963 aa23.19■■□□□ 1.3
COL2A1-203ENST00000465743 PSTPIP2Q9H939 334 aa23.19■■□□□ 1.3
COL2A1-203ENST00000465743 FAM217BQ9NTX9 383 aaPredicted RBP23.19■■□□□ 1.3
COL2A1-203ENST00000465743 PRUNE2Q8WUY3 3088 aa23.19■■□□□ 1.3
COL2A1-203ENST00000465743 SUPT20HL2P0C7V6 817 aa23.18■■□□□ 1.3
COL2A1-203ENST00000465743 HOXD8P13378 290 aaPredicted RBP23.18■■□□□ 1.3
COL2A1-203ENST00000465743 PBX2P40425 430 aa23.18■■□□□ 1.3
COL2A1-203ENST00000465743 PTGISQ16647 500 aa23.18■■□□□ 1.3
COL2A1-203ENST00000465743 Q6ZUG5 572 aa23.18■■□□□ 1.3
COL2A1-203ENST00000465743 OTOP2Q7RTS6 562 aa23.18■■□□□ 1.3
COL2A1-203ENST00000465743 RBM28Q9NW13 759 aaKnown RBP23.18■■□□□ 1.3
COL2A1-203ENST00000465743 DNAJB2P25686 324 aa23.17■■□□□ 1.3
COL2A1-203ENST00000465743 PTPN11Q06124 597 aaPredicted RBP23.17■■□□□ 1.3
COL2A1-203ENST00000465743 KIAA0753Q2KHM9 967 aa23.17■■□□□ 1.3
COL2A1-203ENST00000465743 PCNX4Q63HM2 1172 aa23.17■■□□□ 1.3
COL2A1-203ENST00000465743 KCNV1Q6PIU1 500 aa23.17■■□□□ 1.3
COL2A1-203ENST00000465743 DEFB128Q7Z7B8 93 aa23.17■■□□□ 1.3
COL2A1-203ENST00000465743 DHX38Q92620 1227 aaKnown RBP23.17■■□□□ 1.3
COL2A1-203ENST00000465743 BRF1Q92994 677 aa23.17■■□□□ 1.3
COL2A1-203ENST00000465743 HDAC6Q9UBN7 1215 aa23.17■■□□□ 1.3
COL2A1-203ENST00000465743 NOD1Q9Y239 953 aa23.17■■□□□ 1.3
COL2A1-203ENST00000465743 CHD7Q9P2D1 2997 aa23.17■■□□□ 1.3
COL2A1-203ENST00000465743 FGD1P98174 961 aa23.16■■□□□ 1.3
COL2A1-203ENST00000465743 SP4Q02446 784 aa23.16■■□□□ 1.3
COL2A1-203ENST00000465743 HIC1Q14526 733 aa23.16■■□□□ 1.3
COL2A1-203ENST00000465743 GNPTABQ3T906 1256 aa23.16■■□□□ 1.3
COL2A1-203ENST00000465743 CYFIP1Q7L576 1253 aa23.16■■□□□ 1.3
COL2A1-203ENST00000465743 HERVK_113Q902F9 699 aa23.16■■□□□ 1.3
COL2A1-203ENST00000465743 PGBD1Q96JS3 809 aa23.16■■□□□ 1.3
COL2A1-203ENST00000465743 SEMA6BQ9H3T3 888 aa23.16■■□□□ 1.3
COL2A1-203ENST00000465743 MLXIPQ9HAP2 919 aa23.16■■□□□ 1.3
COL2A1-203ENST00000465743 GTF2IRD1Q9UHL9 959 aa23.16■■□□□ 1.3
COL2A1-203ENST00000465743 STXBP5LQ9Y2K9 1186 aa23.16■■□□□ 1.3
COL2A1-203ENST00000465743 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.15■■□□□ 1.3
COL2A1-203ENST00000465743 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.15■■□□□ 1.3
COL2A1-203ENST00000465743 SPATA31C2B4DYI2 1134 aa23.15■■□□□ 1.3
COL2A1-203ENST00000465743 HAS3O00219 553 aa23.15■■□□□ 1.3
COL2A1-203ENST00000465743 FIBPO43427 364 aa23.15■■□□□ 1.3
COL2A1-203ENST00000465743 FGBP02675 491 aa23.15■■□□□ 1.3
COL2A1-203ENST00000465743 RPS6KB1P23443 525 aa23.15■■□□□ 1.3
COL2A1-203ENST00000465743 ICAM3P32942 547 aa23.15■■□□□ 1.3
COL2A1-203ENST00000465743 ZNF200P98182 395 aaPredicted RBP23.15■■□□□ 1.3
COL2A1-203ENST00000465743 BLOC1S2Q6QNY1 142 aa23.15■■□□□ 1.3
COL2A1-203ENST00000465743 SESTD1Q86VW0 696 aa23.15■■□□□ 1.3
COL2A1-203ENST00000465743 TRIM50Q86XT4 487 aa23.15■■□□□ 1.3
COL2A1-203ENST00000465743 C7orf31Q8N865 590 aa23.15■■□□□ 1.3
COL2A1-203ENST00000465743 WNT8BQ93098 351 aa23.15■■□□□ 1.3
COL2A1-203ENST00000465743 V9GY48 417 aaPredicted RBP23.15■■□□□ 1.3
COL2A1-203ENST00000465743 PTPRSQ13332 1948 aa23.15■■□□□ 1.3
COL2A1-203ENST00000465743 STXBP3O00186 592 aa23.14■■□□□ 1.29
COL2A1-203ENST00000465743 PPFIA3O75145 1194 aa23.14■■□□□ 1.29
COL2A1-203ENST00000465743 TGFB3P10600 412 aa23.14■■□□□ 1.29
COL2A1-203ENST00000465743 PSMA5P28066 241 aa23.14■■□□□ 1.29
COL2A1-203ENST00000465743 ADD1P35611 737 aaKnown RBP23.14■■□□□ 1.29
COL2A1-203ENST00000465743 NAPAP54920 295 aa23.14■■□□□ 1.29
COL2A1-203ENST00000465743 CDX2Q99626 313 aaPredicted RBP23.14■■□□□ 1.29
COL2A1-203ENST00000465743 C16orf70Q9BSU1 422 aa23.14■■□□□ 1.29
COL2A1-203ENST00000465743 KATNAL1Q9BW62 490 aa23.14■■□□□ 1.29
COL2A1-203ENST00000465743 PBX4Q9BYU1 374 aa23.14■■□□□ 1.29
COL2A1-203ENST00000465743 PKD2L1Q9P0L9 805 aa23.14■■□□□ 1.29
COL2A1-203ENST00000465743 PITPNM1O00562 1244 aa23.13■■□□□ 1.29
COL2A1-203ENST00000465743 STAM2O75886 525 aa23.13■■□□□ 1.29
COL2A1-203ENST00000465743 LGALS2P05162 132 aa23.13■■□□□ 1.29
COL2A1-203ENST00000465743 ITGB5P18084 799 aa23.13■■□□□ 1.29
COL2A1-203ENST00000465743 METAP2P50579 478 aaKnown RBP eCLIP23.13■■□□□ 1.29
COL2A1-203ENST00000465743 C8orf34Q49A92 452 aa23.13■■□□□ 1.29
COL2A1-203ENST00000465743 METTL7BQ6UX53 244 aa23.13■■□□□ 1.29
COL2A1-203ENST00000465743 MYLIPQ8WY64 445 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms