RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 PKN1Q16512 942 aa11.4□□□□□ -0.58
CTNNB1-211ENST00000465552 PFKFB3Q16875 520 aaPredicted RBP11.4□□□□□ -0.58
CTNNB1-211ENST00000465552 SAMD3Q8N6K7 520 aa11.4□□□□□ -0.58
CTNNB1-211ENST00000465552 GLT1D1Q96MS3 346 aa11.4□□□□□ -0.58
CTNNB1-211ENST00000465552 TSEN34Q9BSV6 310 aaKnown RBP11.4□□□□□ -0.58
CTNNB1-211ENST00000465552 MAF1Q9H063 256 aa11.4□□□□□ -0.58
CTNNB1-211ENST00000465552 BARHL2Q9NY43 387 aa11.4□□□□□ -0.58
CTNNB1-211ENST00000465552 VPS54Q9P1Q0 977 aa11.4□□□□□ -0.58
CTNNB1-211ENST00000465552 TPCN1Q9ULQ1 816 aa11.4□□□□□ -0.58
CTNNB1-211ENST00000465552 hCG_1984214I3L0E3 225 aa11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 PIK3CDO00329 1044 aa11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 PRPF3O43395 683 aaKnown RBP11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 EIF5BO60841 1220 aaKnown RBP11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 EIF3JO75822 258 aaKnown RBP11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 GH1P01241 217 aa11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 IFNAR1P17181 557 aa11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 EVCP57679 992 aa11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 MDM2Q00987 491 aaPredicted RBP11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 ARHGAP1Q07960 439 aa11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 SSRP1Q08945 709 aaKnown RBP11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 JAKMIP3Q5VZ66 844 aa11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 PPP1R18Q6NYC8 613 aa11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 CCDC62Q6P9F0 684 aa11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 ZNF713Q8N859 430 aaPredicted RBP11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 NECAB1Q8N987 351 aa11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 RASGRP4Q8TDF6 673 aa11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 ZNF274Q96GC6 653 aaPredicted RBP11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 AIFM3Q96NN9 605 aa11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 RNF26Q9BY78 433 aaPredicted RBP11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 SLKQ9H2G2 1235 aaPredicted RBP11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 RIC8AQ9NPQ8 531 aa11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 PKD2L1Q9P0L9 805 aa11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 PCDHA6Q9UN73 950 aa11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 PCDHA8Q9Y5H6 950 aa11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 MYH15Q9Y2K3 1946 aa11.39□□□□□ -0.59
CTNNB1-211ENST00000465552 NKRFO15226 690 aaKnown RBP eCLIP11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 ZEB2O60315 1214 aa11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 GGPS1O95749 300 aa11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 MMP3P08254 477 aa11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 UBA1P22314 1058 aaKnown RBP11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 CPT1AP50416 773 aa11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 SP4Q02446 784 aa11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 TLE2Q04725 743 aa11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 SNX17Q15036 470 aa11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 SH3RF1Q7Z6J0 888 aa11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 VSIG10LQ86VR7 867 aa11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 IFNLR1Q8IU57 520 aaPredicted RBP11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 DHX37Q8IY37 1157 aaKnown RBP11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 TRIM22Q8IYM9 498 aa11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 AFG1LQ8WV93 481 aa11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 SPOCK2Q92563 424 aa11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 ANO3Q9BYT9 981 aa11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 C22orf23Q9BZE7 217 aa11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 BCAS3Q9H6U6 928 aa11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 PDLIM7Q9NR12 457 aa11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 DDX41Q9UJV9 622 aaKnown RBP11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 Q9Y3F1 56 aa11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 TET1Q8NFU7 2136 aa11.38□□□□□ -0.59
CTNNB1-211ENST00000465552 A0A0U1RQG5 324 aaPredicted RBP11.37□□□□□ -0.59
CTNNB1-211ENST00000465552 ZNF286BP0CG31 522 aa11.37□□□□□ -0.59
CTNNB1-211ENST00000465552 FOSBP53539 338 aa11.37□□□□□ -0.59
CTNNB1-211ENST00000465552 PURAQ00577 322 aaKnown RBP11.37□□□□□ -0.59
CTNNB1-211ENST00000465552 SP2Q02086 613 aa11.37□□□□□ -0.59
CTNNB1-211ENST00000465552 SEMA3FQ13275 785 aa11.37□□□□□ -0.59
CTNNB1-211ENST00000465552 ME3Q16798 604 aa11.37□□□□□ -0.59
CTNNB1-211ENST00000465552 GNPTABQ3T906 1256 aa11.37□□□□□ -0.59
CTNNB1-211ENST00000465552 FAM47CQ5HY64 1035 aa11.37□□□□□ -0.59
CTNNB1-211ENST00000465552 PCNX4Q63HM2 1172 aa11.37□□□□□ -0.59
CTNNB1-211ENST00000465552 UIMC1Q96RL1 719 aa11.37□□□□□ -0.59
CTNNB1-211ENST00000465552 EHMT1Q9H9B1 1298 aa11.37□□□□□ -0.59
CTNNB1-211ENST00000465552 POLR3EQ9NVU0 708 aa11.37□□□□□ -0.59
CTNNB1-211ENST00000465552 RBM27Q9P2N5 1060 aaKnown RBP11.37□□□□□ -0.59
CTNNB1-211ENST00000465552 PRKAG2Q9UGJ0 569 aa11.37□□□□□ -0.59
CTNNB1-211ENST00000465552 MICAL3Q7RTP6 2002 aa11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 ARVCFO00192 962 aa11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 PFKFB2O60825 505 aa11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 DEXIO95424 95 aa11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 CLTBP09497 229 aa11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 MAGEA10P43363 369 aaPredicted RBP11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 CLK2P49760 499 aaKnown RBP11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 NKX3-2P78367 333 aa11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 ITGA7Q13683 1181 aa11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 ANKRD1Q15327 319 aa11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 BRDTQ58F21 947 aaPredicted RBP11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 CPLX2Q6PUV4 134 aaKnown RBP11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 REXO1Q8N1G1 1221 aaKnown RBP11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 PDCD7Q8N8D1 485 aaKnown RBP11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 CCDC148Q8NFR7 591 aa11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 CCDC12Q8WUD4 166 aaPredicted RBP11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 IL17RAQ96F46 866 aa11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 INPP4AQ96PE3 977 aaPredicted RBP11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 KIF2CQ99661 725 aa11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 C6orf50Q9HD87 102 aa11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 TELO2Q9Y4R8 837 aa11.36□□□□□ -0.59
CTNNB1-211ENST00000465552 GRIN2DO15399 1336 aa11.35□□□□□ -0.59
CTNNB1-211ENST00000465552 ELP1O95163 1332 aa11.35□□□□□ -0.59
CTNNB1-211ENST00000465552 MROH7Q68CQ1 1323 aa11.35□□□□□ -0.59
CTNNB1-211ENST00000465552 TRIM43BA6NCK2 446 aa11.35□□□□□ -0.59
CTNNB1-211ENST00000465552 A6NJR5 290 aa11.35□□□□□ -0.59
CTNNB1-211ENST00000465552 FIBPO43427 364 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms