RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
APTX-213ENST00000465003 MTMR1Q13613 665 aa13.54□□□□□ -0.24
APTX-213ENST00000465003 NBR1Q14596 966 aa13.54□□□□□ -0.24
APTX-213ENST00000465003 TTLL4Q14679 1199 aa13.54□□□□□ -0.24
APTX-213ENST00000465003 LRRC41Q15345 812 aa13.54□□□□□ -0.24
APTX-213ENST00000465003 LETM2Q2VYF4 491 aa13.54□□□□□ -0.24
APTX-213ENST00000465003 DUSP28Q4G0W2 176 aa13.54□□□□□ -0.24
APTX-213ENST00000465003 MCTP1Q6DN14 999 aa13.54□□□□□ -0.24
APTX-213ENST00000465003 TNFRSF25Q93038 417 aa13.54□□□□□ -0.24
APTX-213ENST00000465003 CRISPLD2Q9H0B8 497 aa13.54□□□□□ -0.24
APTX-213ENST00000465003 GLT8D2Q9H1C3 349 aa13.54□□□□□ -0.24
APTX-213ENST00000465003 NRBP1Q9UHY1 535 aa13.54□□□□□ -0.24
APTX-213ENST00000465003 DDX41Q9UJV9 622 aaKnown RBP13.54□□□□□ -0.24
APTX-213ENST00000465003 OGDHLQ9ULD0 1010 aa13.54□□□□□ -0.24
APTX-213ENST00000465003 CTAGE5O15320 804 aa13.53□□□□□ -0.24
APTX-213ENST00000465003 DUSP11O75319 330 aaKnown RBP13.53□□□□□ -0.24
APTX-213ENST00000465003 GGPS1O95749 300 aa13.53□□□□□ -0.24
APTX-213ENST00000465003 NONOQ15233 471 aaKnown RBP eCLIP13.53□□□□□ -0.24
APTX-213ENST00000465003 PRR16Q569H4 304 aa13.53□□□□□ -0.24
APTX-213ENST00000465003 LARP1BQ659C4 914 aaKnown RBP13.53□□□□□ -0.24
APTX-213ENST00000465003 IQSEC1Q6DN90 963 aa13.53□□□□□ -0.24
APTX-213ENST00000465003 CYFIP1Q7L576 1253 aa13.53□□□□□ -0.24
APTX-213ENST00000465003 OR6J1Q8NGC5 347 aa13.53□□□□□ -0.24
APTX-213ENST00000465003 PAWRQ96IZ0 340 aaKnown RBP13.53□□□□□ -0.24
APTX-213ENST00000465003 MAF1Q9H063 256 aa13.53□□□□□ -0.24
APTX-213ENST00000465003 EHMT1Q9H9B1 1298 aa13.53□□□□□ -0.24
APTX-213ENST00000465003 UBIAD1Q9Y5Z9 338 aa13.53□□□□□ -0.24
APTX-213ENST00000465003 LOC102724159A0A0B4J2E5 919 aa13.52□□□□□ -0.24
APTX-213ENST00000465003 VPS37CA5D8V6 355 aaPredicted RBP13.52□□□□□ -0.24
APTX-213ENST00000465003 CHMP4BP1P59074 171 aa13.52□□□□□ -0.24
APTX-213ENST00000465003 PWP2Q15269 919 aaKnown RBP13.52□□□□□ -0.24
APTX-213ENST00000465003 CEP55Q53EZ4 464 aa13.52□□□□□ -0.24
APTX-213ENST00000465003 GNASQ5JWF2 1037 aa13.52□□□□□ -0.24
APTX-213ENST00000465003 FOXD4L5Q5VV16 416 aaPredicted RBP13.52□□□□□ -0.24
APTX-213ENST00000465003 FERMT3Q86UX7 667 aa13.52□□□□□ -0.24
APTX-213ENST00000465003 FOXD4L4Q8WXT5 416 aaPredicted RBP13.52□□□□□ -0.24
APTX-213ENST00000465003 MXRA8Q9BRK3 442 aa13.52□□□□□ -0.24
APTX-213ENST00000465003 BRMS1Q9HCU9 246 aa13.52□□□□□ -0.24
APTX-213ENST00000465003 KCNH7Q9NS40 1196 aa13.52□□□□□ -0.24
APTX-213ENST00000465003 IGLV3-22A0A075B6J6 115 aa13.52□□□□□ -0.25
APTX-213ENST00000465003 RBM47A0AV96 593 aaKnown RBP13.52□□□□□ -0.25
APTX-213ENST00000465003 H3BQV1 296 aa13.52□□□□□ -0.25
APTX-213ENST00000465003 SLC37A4O43826 429 aa13.52□□□□□ -0.25
APTX-213ENST00000465003 MSCO60682 206 aa13.52□□□□□ -0.25
APTX-213ENST00000465003 ARHGAP1Q07960 439 aa13.52□□□□□ -0.25
APTX-213ENST00000465003 GNL2Q13823 731 aaKnown RBP13.52□□□□□ -0.25
APTX-213ENST00000465003 HSDL1Q3SXM5 330 aa13.52□□□□□ -0.25
APTX-213ENST00000465003 GNPTABQ3T906 1256 aa13.52□□□□□ -0.25
APTX-213ENST00000465003 IFFO2Q5TF58 517 aa13.52□□□□□ -0.25
APTX-213ENST00000465003 KRT25Q7Z3Z0 450 aa13.52□□□□□ -0.25
APTX-213ENST00000465003 PLA2G4DQ86XP0 818 aa13.52□□□□□ -0.25
APTX-213ENST00000465003 AFG1LQ8WV93 481 aa13.52□□□□□ -0.25
APTX-213ENST00000465003 JADE2Q9NQC1 790 aa13.52□□□□□ -0.25
APTX-213ENST00000465003 FIBPO43427 364 aa13.51□□□□□ -0.25
APTX-213ENST00000465003 CCNT1O60563 726 aaKnown RBP13.51□□□□□ -0.25
APTX-213ENST00000465003 FARP2O94887 1054 aaPredicted RBP13.51□□□□□ -0.25
APTX-213ENST00000465003 ATN1P54259 1190 aaPredicted RBP13.51□□□□□ -0.25
APTX-213ENST00000465003 KCNA10Q16322 511 aa13.51□□□□□ -0.25
APTX-213ENST00000465003 FSCN1Q16658 493 aaKnown RBP13.51□□□□□ -0.25
APTX-213ENST00000465003 GALNT17Q6IS24 598 aa13.51□□□□□ -0.25
APTX-213ENST00000465003 CXCL17Q6UXB2 119 aa13.51□□□□□ -0.25
APTX-213ENST00000465003 LENG9Q96B70 501 aa13.51□□□□□ -0.25
APTX-213ENST00000465003 SPATA31C2B4DYI2 1134 aa13.51□□□□□ -0.25
APTX-213ENST00000465003 ASGR1P07306 291 aa13.51□□□□□ -0.25
APTX-213ENST00000465003 ZNF286BP0CG31 522 aa13.51□□□□□ -0.25
APTX-213ENST00000465003 ITGB3BPQ13352 177 aaPredicted RBP13.51□□□□□ -0.25
APTX-213ENST00000465003 PKP1Q13835 747 aa13.51□□□□□ -0.25
APTX-213ENST00000465003 SAFBQ15424 915 aaKnown RBP eCLIP13.51□□□□□ -0.25
APTX-213ENST00000465003 NEK8Q86SG6 692 aa13.51□□□□□ -0.25
APTX-213ENST00000465003 NLRX1Q86UT6 975 aa13.51□□□□□ -0.25
APTX-213ENST00000465003 DHX37Q8IY37 1157 aaKnown RBP13.51□□□□□ -0.25
APTX-213ENST00000465003 IL27Q8NEV9 243 aa13.51□□□□□ -0.25
APTX-213ENST00000465003 SPATA33Q96N06 139 aa13.51□□□□□ -0.25
APTX-213ENST00000465003 SENP6Q9GZR1 1112 aaPredicted RBP13.51□□□□□ -0.25
APTX-213ENST00000465003 AP5M1Q9H0R1 490 aa13.51□□□□□ -0.25
APTX-213ENST00000465003 MEIS1O00470 390 aa13.5□□□□□ -0.25
APTX-213ENST00000465003 KCNA2P16389 499 aa13.5□□□□□ -0.25
APTX-213ENST00000465003 SYT1P21579 422 aa13.5□□□□□ -0.25
APTX-213ENST00000465003 LAMA2P24043 3122 aaKnown RBP13.5□□□□□ -0.25
APTX-213ENST00000465003 GJA9P57773 515 aa13.5□□□□□ -0.25
APTX-213ENST00000465003 PSMC6P62333 389 aa13.5□□□□□ -0.25
APTX-213ENST00000465003 CELF3Q5SZQ8 465 aaKnown RBP13.5□□□□□ -0.25
APTX-213ENST00000465003 MYSM1Q5VVJ2 828 aa13.5□□□□□ -0.25
APTX-213ENST00000465003 PPP4R3CPQ6ZMV5 832 aa13.5□□□□□ -0.25
APTX-213ENST00000465003 TRIM50Q86XT4 487 aa13.5□□□□□ -0.25
APTX-213ENST00000465003 MLXIPQ9HAP2 919 aa13.5□□□□□ -0.25
APTX-213ENST00000465003 KBTBD13C9JR72 458 aa13.49□□□□□ -0.25
APTX-213ENST00000465003 GH1P01241 217 aa13.49□□□□□ -0.25
APTX-213ENST00000465003 MYL3P08590 195 aa13.49□□□□□ -0.25
APTX-213ENST00000465003 CYP3A4P08684 503 aa13.49□□□□□ -0.25
APTX-213ENST00000465003 CCSAPQ6IQ19 270 aaPredicted RBP13.49□□□□□ -0.25
APTX-213ENST00000465003 FAM173BQ6P4H8 233 aa13.49□□□□□ -0.25
APTX-213ENST00000465003 RNF180Q86T96 592 aa13.49□□□□□ -0.25
APTX-213ENST00000465003 KLHDC9Q8NEP7 349 aa13.49□□□□□ -0.25
APTX-213ENST00000465003 GPRASP2Q96D09 838 aa13.49□□□□□ -0.25
APTX-213ENST00000465003 INTS4Q96HW7 963 aaKnown RBP13.49□□□□□ -0.25
APTX-213ENST00000465003 AGO4Q9HCK5 861 aaKnown RBP13.49□□□□□ -0.25
APTX-213ENST00000465003 DDX25Q9UHL0 483 aaKnown RBP13.49□□□□□ -0.25
APTX-213ENST00000465003 KIF3AQ9Y496 699 aa13.49□□□□□ -0.25
APTX-213ENST00000465003 DNM1LO00429 736 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms