RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 SLC52A2Q9HAB3 445 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 SPC25Q9HBM1 224 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 CLEC1BQ9P126 229 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 SFMBT1Q9UHJ3 866 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 THBDP07204 575 aa6.73□□□□□ -1.33
USP25-207ENST00000464435 TACR1P25103 407 aa6.73□□□□□ -1.33
USP25-207ENST00000464435 ZNF200P98182 395 aaPredicted RBP6.73□□□□□ -1.33
USP25-207ENST00000464435 ACBD5Q5T8D3 534 aaPredicted RBP6.73□□□□□ -1.33
USP25-207ENST00000464435 WWC2Q6AWC2 1192 aa6.73□□□□□ -1.33
USP25-207ENST00000464435 USP53Q70EK8 1073 aa6.73□□□□□ -1.33
USP25-207ENST00000464435 KREMEN2Q8NCW0 462 aa6.73□□□□□ -1.33
USP25-207ENST00000464435 SLC7A14Q8TBB6 771 aa6.73□□□□□ -1.33
USP25-207ENST00000464435 USP33Q8TEY7 942 aa6.73□□□□□ -1.33
USP25-207ENST00000464435 CPA5Q8WXQ8 436 aa6.73□□□□□ -1.33
USP25-207ENST00000464435 MRPL4Q9BYD3 311 aaKnown RBP6.73□□□□□ -1.33
USP25-207ENST00000464435 EPB41L4AQ9HCS5 686 aaPredicted RBP6.73□□□□□ -1.33
USP25-207ENST00000464435 GPRC5CQ9NQ84 441 aa6.73□□□□□ -1.33
USP25-207ENST00000464435 NDOR1Q9UHB4 597 aa6.73□□□□□ -1.33
USP25-207ENST00000464435 RWDD3Q9Y3V2 267 aa6.73□□□□□ -1.33
USP25-207ENST00000464435 COL4A3BPQ9Y5P4 624 aa6.73□□□□□ -1.33
USP25-207ENST00000464435 ZC3H12DA2A288 527 aaKnown RBP6.72□□□□□ -1.33
USP25-207ENST00000464435 PPP1R11O60927 126 aaPredicted RBP6.72□□□□□ -1.33
USP25-207ENST00000464435 RFPL3O75679 317 aa6.72□□□□□ -1.33
USP25-207ENST00000464435 SDSP20132 328 aa6.72□□□□□ -1.33
USP25-207ENST00000464435 KCNAB2Q13303 367 aa6.72□□□□□ -1.33
USP25-207ENST00000464435 FNDC3BQ53EP0 1204 aaKnown RBP6.72□□□□□ -1.33
USP25-207ENST00000464435 TRIM61Q5EBN2 209 aa6.72□□□□□ -1.33
USP25-207ENST00000464435 TAF7LQ5H9L4 462 aa6.72□□□□□ -1.33
USP25-207ENST00000464435 BRAPQ7Z569 592 aa6.72□□□□□ -1.33
USP25-207ENST00000464435 DCP2Q8IU60 420 aaKnown RBP6.72□□□□□ -1.33
USP25-207ENST00000464435 FRS2Q8WU20 508 aa6.72□□□□□ -1.33
USP25-207ENST00000464435 TRIM39Q9HCM9 518 aa6.72□□□□□ -1.33
USP25-207ENST00000464435 GULP1Q9UBP9 304 aa6.72□□□□□ -1.33
USP25-207ENST00000464435 TRAF6Q9Y4K3 522 aa6.72□□□□□ -1.33
USP25-207ENST00000464435 ASXL2Q76L83 1435 aa6.72□□□□□ -1.33
USP25-207ENST00000464435 ARNTLO00327 626 aa6.71□□□□□ -1.34
USP25-207ENST00000464435 DNAJC8O75937 253 aaPredicted RBP6.71□□□□□ -1.34
USP25-207ENST00000464435 FGD2Q7Z6J4 655 aa6.71□□□□□ -1.34
USP25-207ENST00000464435 THNSL2Q86YJ6 484 aa6.71□□□□□ -1.34
USP25-207ENST00000464435 RIOX2Q8IUF8 465 aa6.71□□□□□ -1.34
USP25-207ENST00000464435 PPIL6Q8IXY8 311 aa6.71□□□□□ -1.34
USP25-207ENST00000464435 ANKRD13AQ8IZ07 590 aa6.71□□□□□ -1.34
USP25-207ENST00000464435 Q8N1Y9 231 aa6.71□□□□□ -1.34
USP25-207ENST00000464435 GSTCDQ8NEC7 633 aa6.71□□□□□ -1.34
USP25-207ENST00000464435 PLEKHO2Q8TD55 490 aa6.71□□□□□ -1.34
USP25-207ENST00000464435 PANK1Q8TE04 598 aa6.71□□□□□ -1.34
USP25-207ENST00000464435 DIO2Q92813 273 aa6.71□□□□□ -1.34
USP25-207ENST00000464435 PCDH18Q9HCL0 1135 aa6.71□□□□□ -1.34
USP25-207ENST00000464435 PCDH12Q9NPG4 1184 aa6.71□□□□□ -1.34
USP25-207ENST00000464435 TMEFF2Q9UIK5 374 aaPredicted RBP6.71□□□□□ -1.34
USP25-207ENST00000464435 TIMM13Q9Y5L4 95 aaPredicted RBP6.71□□□□□ -1.34
USP25-207ENST00000464435 A0A087X0B3 334 aa6.7□□□□□ -1.34
USP25-207ENST00000464435 MEFVO15553 781 aaPredicted RBP6.7□□□□□ -1.34
USP25-207ENST00000464435 MYO1BO43795 1136 aa6.7□□□□□ -1.34
USP25-207ENST00000464435 VIL1P09327 827 aaKnown RBP6.7□□□□□ -1.34
USP25-207ENST00000464435 MYCLP1P12525 358 aaPredicted RBP6.7□□□□□ -1.34
USP25-207ENST00000464435 RPL11P62913 178 aaKnown RBP6.7□□□□□ -1.34
USP25-207ENST00000464435 MROH9Q5TGP6 573 aa6.7□□□□□ -1.34
USP25-207ENST00000464435 KCNT2Q6UVM3 1135 aa6.7□□□□□ -1.34
USP25-207ENST00000464435 CCDC103Q8IW40 242 aa6.7□□□□□ -1.34
USP25-207ENST00000464435 MARCH10Q8NA82 808 aaPredicted RBP6.7□□□□□ -1.34
USP25-207ENST00000464435 ALG3Q92685 438 aa6.7□□□□□ -1.34
USP25-207ENST00000464435 PWWP2AQ96N64 755 aa6.7□□□□□ -1.34
USP25-207ENST00000464435 FAM126AQ9BYI3 521 aaPredicted RBP6.7□□□□□ -1.34
USP25-207ENST00000464435 PARD6AQ9NPB6 346 aa6.7□□□□□ -1.34
USP25-207ENST00000464435 FAN1Q9Y2M0 1017 aa6.7□□□□□ -1.34
USP25-207ENST00000464435 hCG_2014768A0A024R1R8 64 aa6.69□□□□□ -1.34
USP25-207ENST00000464435 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.69□□□□□ -1.34
USP25-207ENST00000464435 FAM83GA6ND36 823 aa6.69□□□□□ -1.34
USP25-207ENST00000464435 RASGRP1O95267 797 aa6.69□□□□□ -1.34
USP25-207ENST00000464435 FUCA1P04066 466 aa6.69□□□□□ -1.34
USP25-207ENST00000464435 ASGR2P07307 311 aa6.69□□□□□ -1.34
USP25-207ENST00000464435 SLC6A11P48066 632 aa6.69□□□□□ -1.34
USP25-207ENST00000464435 GABREP78334 506 aa6.69□□□□□ -1.34
USP25-207ENST00000464435 FOXO4P98177 505 aa6.69□□□□□ -1.34
USP25-207ENST00000464435 AMPD3Q01432 767 aa6.69□□□□□ -1.34
USP25-207ENST00000464435 ZNF460Q14592 562 aa6.69□□□□□ -1.34
USP25-207ENST00000464435 B3GNT8Q7Z7M8 397 aa6.69□□□□□ -1.34
USP25-207ENST00000464435 SP8Q8IXZ3 490 aa6.69□□□□□ -1.34
USP25-207ENST00000464435 LINC01356Q8N9X3 169 aa6.69□□□□□ -1.34
USP25-207ENST00000464435 SEC14L1Q92503 715 aa6.69□□□□□ -1.34
USP25-207ENST00000464435 DPF3Q92784 378 aa6.69□□□□□ -1.34
USP25-207ENST00000464435 PTPRN2Q92932 1015 aa6.69□□□□□ -1.34
USP25-207ENST00000464435 SCLYQ96I15 445 aa6.69□□□□□ -1.34
USP25-207ENST00000464435 KCNC2Q96PR1 638 aa6.69□□□□□ -1.34
USP25-207ENST00000464435 TARS2Q9BW92 718 aaKnown RBP6.69□□□□□ -1.34
USP25-207ENST00000464435 AP5M1Q9H0R1 490 aa6.69□□□□□ -1.34
USP25-207ENST00000464435 GSG1L2A8MUP6 293 aa6.68□□□□□ -1.34
USP25-207ENST00000464435 KCNQ2O43526 872 aa6.68□□□□□ -1.34
USP25-207ENST00000464435 PDE8AO60658 829 aa6.68□□□□□ -1.34
USP25-207ENST00000464435 SASH1O94885 1247 aa6.68□□□□□ -1.34
USP25-207ENST00000464435 INHBBP09529 407 aa6.68□□□□□ -1.34
USP25-207ENST00000464435 LTBRP36941 435 aa6.68□□□□□ -1.34
USP25-207ENST00000464435 NCKAP1LP55160 1127 aa6.68□□□□□ -1.34
USP25-207ENST00000464435 INF2Q27J81 1249 aa6.68□□□□□ -1.34
USP25-207ENST00000464435 MBLAC2Q68D91 279 aa6.68□□□□□ -1.34
USP25-207ENST00000464435 STYK1Q6J9G0 422 aa6.68□□□□□ -1.34
USP25-207ENST00000464435 PHF20Q9BVI0 1012 aa6.68□□□□□ -1.34
USP25-207ENST00000464435 LUC7LQ9NQ29 371 aaKnown RBP6.68□□□□□ -1.34
USP25-207ENST00000464435 MARCH2Q9P0N8 246 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms