RNA–Protein interactions for RNA: ENST00000464395.1

PITRM1-209, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 1 (best)

Gene PITRM1, Length 3,240 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-209ENST00000464395 LRRC41Q15345 812 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 ARHGAP27Q6ZUM4 889 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 CCDC155Q8N6L0 562 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 DCAF4Q8WV16 495 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 JAKMIP2Q96AA8 810 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 CCDC17Q96LX7 622 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 PSTPIP2Q9H939 334 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 FER1L6Q2WGJ9 1857 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 ANO9A1A5B4 782 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 USP17L15C9J2P7 530 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 USP17L13C9JLJ4 530 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 USP17L11C9JVI0 530 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 USP17L18D6R9N7 530 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 USP17L22D6RA61 530 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 USP17L17D6RBQ6 530 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 USP17L19D6RCP7 530 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 USP17L20D6RJB6 530 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 POTEB2H3BUK9 544 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 MED24O75448 989 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 MTIF2P46199 727 aaKnown RBP12.18□□□□□ -0.46
PITRM1-209ENST00000464395 TNNI2P48788 182 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 CYP27A1Q02318 531 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 USP17L24Q0WX57 530 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 TMEM266Q2M3C6 531 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 CCDC122Q5T0U0 273 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 USP17L6PQ6QN14 398 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 EPM2AIP1Q7L775 607 aaPredicted RBP12.18□□□□□ -0.46
PITRM1-209ENST00000464395 SCFD1Q8WVM8 642 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 TEKT1Q969V4 418 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 EDEM3Q9BZQ6 932 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 SH2D4AQ9H788 454 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 CTAGE15A4D2H0 777 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 CTAGE8P0CG41 777 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 SPATA31C1P0DKV0 1188 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 CYP11B2P19099 503 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 TRIM21P19474 475 aaKnown RBP12.18□□□□□ -0.46
PITRM1-209ENST00000464395 OAS2P29728 719 aaKnown RBP12.18□□□□□ -0.46
PITRM1-209ENST00000464395 HDLBPQ00341 1268 aaKnown RBP12.18□□□□□ -0.46
PITRM1-209ENST00000464395 Q4G0T1 1027 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 PDXDC1Q6P996 788 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 CTAGE6Q86UF2 777 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 CREG2Q8IUH2 290 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 CTAGE4Q8IX94 777 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 GMCL1P1Q8NEA9 526 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 C7orf43Q8WVR3 580 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 ZC3H12CQ9C0D7 883 aaKnown RBP12.18□□□□□ -0.46
PITRM1-209ENST00000464395 CAPN6Q9Y6Q1 641 aa12.18□□□□□ -0.46
PITRM1-209ENST00000464395 E9PMD0 336 aa12.17□□□□□ -0.46
PITRM1-209ENST00000464395 HSPA1LP34931 641 aa12.17□□□□□ -0.46
PITRM1-209ENST00000464395 MRPL12P52815 198 aaKnown RBP12.17□□□□□ -0.46
PITRM1-209ENST00000464395 KRT79Q5XKE5 535 aa12.17□□□□□ -0.46
PITRM1-209ENST00000464395 TRIM59Q8IWR1 403 aa12.17□□□□□ -0.46
PITRM1-209ENST00000464395 CCDC47Q96A33 483 aaKnown RBP12.17□□□□□ -0.46
PITRM1-209ENST00000464395 NPHP3-ACAD11A0A0J9YXS1 232 aa12.17□□□□□ -0.46
PITRM1-209ENST00000464395 LRRC53A6NM62 1247 aa12.17□□□□□ -0.46
PITRM1-209ENST00000464395 FAM196BA6NMK8 535 aa12.17□□□□□ -0.46
PITRM1-209ENST00000464395 CYLC1P35663 651 aaPredicted RBP12.17□□□□□ -0.46
PITRM1-209ENST00000464395 BTNL9Q6UXG8 535 aa12.17□□□□□ -0.46
PITRM1-209ENST00000464395 PODNQ7Z5L7 613 aa12.17□□□□□ -0.46
PITRM1-209ENST00000464395 PCDHA13Q9Y5I0 950 aa12.17□□□□□ -0.46
PITRM1-209ENST00000464395 SAR1BQ9Y6B6 198 aa12.17□□□□□ -0.46
PITRM1-209ENST00000464395 LRRIQ3A6PVS8 624 aaPredicted RBP12.16□□□□□ -0.46
PITRM1-209ENST00000464395 ZNF185O15231 689 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 PRLRP16471 622 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 MASTLQ96GX5 879 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 ANO3Q9BYT9 981 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 COL4A5P29400 1685 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 ALDH1B1P30837 517 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 CIITAP33076 1130 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 CACNB3P54284 484 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 CDC37Q16543 378 aaPredicted RBP12.16□□□□□ -0.46
PITRM1-209ENST00000464395 STRIP1Q5VSL9 837 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 KRT27Q7Z3Y8 459 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 NLGN1Q8N2Q7 840 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 SMCR8Q8TEV9 937 aaPredicted RBP12.16□□□□□ -0.46
PITRM1-209ENST00000464395 GMCL1Q96IK5 515 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 RAB34Q9BZG1 259 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 DHX36Q9H2U1 1008 aaKnown RBP12.16□□□□□ -0.46
PITRM1-209ENST00000464395 PANK4Q9NVE7 773 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 VAV3Q9UKW4 847 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 PCDHA12Q9UN75 941 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 LOXHD1Q8IVV2 1947 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 POTEB3A0JP26 581 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 TARSL2A2RTX5 802 aaKnown RBP12.16□□□□□ -0.46
PITRM1-209ENST00000464395 POTECB2RU33 542 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 RHOXF2BP0C7M4 288 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 EIF4A3P38919 411 aaKnown RBP12.16□□□□□ -0.46
PITRM1-209ENST00000464395 KIF11P52732 1056 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 POTEBQ6S5H4 581 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 MYOCDQ8IZQ8 938 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 OLIG1Q8TAK6 271 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 SYN2Q92777 582 aaPredicted RBP12.16□□□□□ -0.46
PITRM1-209ENST00000464395 CEP63Q96MT8 703 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 RHOXF2Q9BQY4 288 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 LRRC27Q9C0I9 530 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 QTRT2Q9H974 415 aaKnown RBP12.16□□□□□ -0.46
PITRM1-209ENST00000464395 NENFQ9UMX5 172 aa12.16□□□□□ -0.46
PITRM1-209ENST00000464395 PITPNM2Q9BZ72 1349 aa12.15□□□□□ -0.46
PITRM1-209ENST00000464395 KDM3AQ9Y4C1 1321 aa12.15□□□□□ -0.46
PITRM1-209ENST00000464395 FAM86B1E9PN63 330 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms