RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 USP21Q9UK80 565 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 AGTPBP1Q9UPW5 1226 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 A0A1B0GTH6 734 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 POTEB3A0JP26 581 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 POTECB2RU33 542 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 SMIM22K7EJ46 135 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 TBC1D8O95759 1140 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 GNA14O95837 355 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 MAP3K9P80192 1104 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 ATP2C1P98194 919 aaPredicted RBP9.93□□□□□ -0.82
HPS4-208ENST00000464362 PTPAQ15257 358 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 DCUN1D2Q6PH85 259 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 POTEBQ6S5H4 581 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 REXO1L1PQ8IX06 675 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 PSMD1Q99460 953 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 TMEM60Q9H2L4 133 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 GCNT4Q9P109 453 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 FAM184BQ9ULE4 1060 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 GJA3Q9Y6H8 435 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 MROH2AA6NES4 1674 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 RFX7Q2KHR2 1363 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 NR1I3Q14994 352 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 SETDB1Q15047 1291 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 MIER3Q7Z3K6 550 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 ILDR1Q86SU0 546 aaPredicted RBP9.92□□□□□ -0.82
HPS4-208ENST00000464362 LARGE2Q8N3Y3 721 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 SH2D3CQ8N5H7 860 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 CUEDC2Q9H467 287 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 NOVA2Q9UNW9 492 aaKnown RBP9.92□□□□□ -0.82
HPS4-208ENST00000464362 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.92□□□□□ -0.82
HPS4-208ENST00000464362 UTYO14607 1347 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 TTLL1O95922 423 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 CD44P16070 742 aaKnown RBP9.92□□□□□ -0.82
HPS4-208ENST00000464362 CTTNQ14247 550 aaKnown RBP9.92□□□□□ -0.82
HPS4-208ENST00000464362 NCAPHQ15003 741 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 TRIP13Q15645 432 aaPredicted RBP9.92□□□□□ -0.82
HPS4-208ENST00000464362 LRCH2Q5VUJ6 765 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 KAZNQ674X7 775 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 FAM186BQ8IYM0 893 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 RAB17Q9H0T7 212 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 EHD2Q9NZN4 543 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 STIM2Q9P246 746 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 DLC1Q96QB1 1528 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 ATF7P17544 494 aaPredicted RBP9.92□□□□□ -0.82
HPS4-208ENST00000464362 ATP2B4P23634 1241 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 STAT3P40763 770 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 MKRN4PQ13434 485 aaPredicted RBP9.92□□□□□ -0.82
HPS4-208ENST00000464362 XKR9Q5GH70 373 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 KIFAP3Q92845 792 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 SH2D3AQ9BRG2 576 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 AMNQ9BXJ7 453 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 PPP1R12CQ9BZL4 782 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 DDX47Q9H0S4 455 aaKnown RBP9.92□□□□□ -0.82
HPS4-208ENST00000464362 GLT8D2Q9H1C3 349 aa9.92□□□□□ -0.82
HPS4-208ENST00000464362 LAD1O00515 517 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 PPIP5K2O43314 1243 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 SERPINB2P05120 415 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 TOB1P50616 345 aaPredicted RBP9.91□□□□□ -0.82
HPS4-208ENST00000464362 PPP1R21Q6ZMI0 780 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 TCP11Q8WWU5 503 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 MS4A14Q96JA4 679 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 GOLPH3Q9H4A6 298 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 VPS37BQ9H9H4 285 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 TBK1Q9UHD2 729 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 REREQ9P2R6 1566 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 CTNND1O60716 968 aaKnown RBP9.91□□□□□ -0.82
HPS4-208ENST00000464362 GKAP1Q5VSY0 366 aaPredicted RBP9.91□□□□□ -0.82
HPS4-208ENST00000464362 RBM43Q6ZSC3 357 aaKnown RBP9.91□□□□□ -0.82
HPS4-208ENST00000464362 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.91□□□□□ -0.82
HPS4-208ENST00000464362 LRRC1Q9BTT6 524 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.91□□□□□ -0.825e-8■■■■■ 32.9
HPS4-208ENST00000464362 LARSQ9P2J5 1176 aaKnown RBP9.91□□□□□ -0.82
HPS4-208ENST00000464362 CEP83Q9Y592 693 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 WDR19Q8NEZ3 1342 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 POTEFA5A3E0 1075 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 GOLGA8IPA6NC78 632 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 GOLGA8JA6NMD2 632 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 AFPP02771 609 aaKnown RBP9.91□□□□□ -0.82
HPS4-208ENST00000464362 CSF1RP07333 972 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 RPSAP08865 295 aaKnown RBP9.91□□□□□ -0.82
HPS4-208ENST00000464362 POTEIP0CG38 1075 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 STX2P32856 288 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 ADCY8P40145 1251 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 ZNF131P52739 623 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 CLNS1AP54105 237 aaKnown RBP9.91□□□□□ -0.82
HPS4-208ENST00000464362 ZNF211Q13398 564 aaPredicted RBP9.91□□□□□ -0.82
HPS4-208ENST00000464362 ABCB5Q2M3G0 1257 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 POTEGQ6S5H5 508 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 POTEEQ6S8J3 1075 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 STK17AQ9UEE5 414 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 DUSP10Q9Y6W6 482 aa9.91□□□□□ -0.82
HPS4-208ENST00000464362 USP17L10C9JJH3 530 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 PGRMC1O00264 195 aaKnown RBP9.9□□□□□ -0.82
HPS4-208ENST00000464362 SEMA3EO15041 775 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 KRT19P08727 400 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 NR1D1P20393 614 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 KLRK1P26718 216 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 PLA2G4AP47712 749 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 MTMR3Q13615 1198 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 FAM83BQ5T0W9 1011 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms