RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 UIMC1Q96RL1 719 aa24.25■■□□□ 1.47
PDLIM2-216ENST00000464275 KIAA1024Q9UPX6 916 aa24.25■■□□□ 1.47
PDLIM2-216ENST00000464275 ITIH6Q6UXX5 1313 aa24.25■■□□□ 1.47
PDLIM2-216ENST00000464275 N4BP3O15049 544 aa24.25■■□□□ 1.47
PDLIM2-216ENST00000464275 IRF2BP1Q8IU81 584 aa24.25■■□□□ 1.47
PDLIM2-216ENST00000464275 KIAA0895Q8NCT3 520 aa24.25■■□□□ 1.47
PDLIM2-216ENST00000464275 SRRTQ9BXP5 876 aaKnown RBP24.25■■□□□ 1.47
PDLIM2-216ENST00000464275 GOLGB1Q14789 3259 aaKnown RBP24.24■■□□□ 1.47
PDLIM2-216ENST00000464275 USP27XA6NNY8 438 aa24.24■■□□□ 1.47
PDLIM2-216ENST00000464275 STAT3P40763 770 aa24.24■■□□□ 1.47
PDLIM2-216ENST00000464275 TC2NQ8N9U0 490 aa24.24■■□□□ 1.47
PDLIM2-216ENST00000464275 BMP2KQ9NSY1 1161 aaPredicted RBP24.24■■□□□ 1.47
PDLIM2-216ENST00000464275 LOXHD1Q8IVV2 1947 aa24.24■■□□□ 1.47
PDLIM2-216ENST00000464275 IGLV3-22A0A075B6J6 115 aa24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 POTEB3A0JP26 581 aa24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 POTECB2RU33 542 aa24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 MED24O75448 989 aa24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 NCAPH2Q6IBW4 605 aa24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 POTEBQ6S5H4 581 aa24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 DUSP9Q99956 384 aaKnown RBP24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 VPS16Q9H269 839 aa24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 SLC39A2Q9NP94 309 aa24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 TAB2Q9NYJ8 693 aa24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 MAGEC2Q9UBF1 373 aaPredicted RBP24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 ZNF112Q9UJU3 913 aa24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 CCPG1Q9ULG6 757 aa24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 E9PMD0 336 aa24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 USP14P54578 494 aa24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 EHHADHQ08426 723 aa24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 GOLGA8FQ08AF8 430 aa24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 GOLGA8DPQ0D2H9 430 aa24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 E4F1Q66K89 784 aaPredicted RBP24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 PPFIBP1Q86W92 1011 aa24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 DNAJC19Q96DA6 116 aa24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 ZNF536O15090 1300 aa24.23■■□□□ 1.47
PDLIM2-216ENST00000464275 AKR1B15C9JRZ8 316 aaPredicted RBP24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 PLA2G4BP0C869 781 aa24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 IDEP14735 1019 aa24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 RPA1P27694 616 aa24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 ANGEL2Q5VTE6 544 aaKnown RBP24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 ANKRD40Q6AI12 368 aa24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 TMEM139Q8IV31 216 aa24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 FAM114A1Q8IWE2 563 aa24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 CSGALNACT2Q8N6G5 542 aa24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 ERO1AQ96HE7 468 aa24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 GPRC5DQ9NZD1 345 aa24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 VAV3Q9UKW4 847 aa24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 COL11A1P12107 1806 aaPredicted RBP24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 CENPPQ6IPU0 288 aa24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 SCYL3Q8IZE3 742 aa24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 GUF1Q8N442 669 aaKnown RBP24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 CYP2W1Q8TAV3 490 aa24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 WDR18Q9BV38 432 aa24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 TRMT1Q9NXH9 659 aaKnown RBP24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 RABGAP1Q9Y3P9 1069 aa24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.22■■□□□ 1.47
PDLIM2-216ENST00000464275 ARHGAP6O43182 974 aa24.21■■□□□ 1.47
PDLIM2-216ENST00000464275 STX10O60499 249 aa24.21■■□□□ 1.47
PDLIM2-216ENST00000464275 HSD17B4P51659 736 aa24.21■■□□□ 1.47
PDLIM2-216ENST00000464275 ADKP55263 362 aaKnown RBP24.21■■□□□ 1.47
PDLIM2-216ENST00000464275 CATSPER3Q86XQ3 398 aa24.21■■□□□ 1.47
PDLIM2-216ENST00000464275 CREBRFQ8IUR6 639 aa24.21■■□□□ 1.47
PDLIM2-216ENST00000464275 ZNF592Q92610 1267 aa24.21■■□□□ 1.47
PDLIM2-216ENST00000464275 HPS3Q969F9 1004 aa24.21■■□□□ 1.47
PDLIM2-216ENST00000464275 AGBL1Q96MI9 1066 aa24.21■■□□□ 1.47
PDLIM2-216ENST00000464275 BAG1Q99933 345 aaPredicted RBP24.21■■□□□ 1.47
PDLIM2-216ENST00000464275 AS3MTQ9HBK9 375 aa24.21■■□□□ 1.47
PDLIM2-216ENST00000464275 SSBP05455 408 aaKnown RBP eCLIP24.2■■□□□ 1.46
PDLIM2-216ENST00000464275 GPC2Q8N158 579 aa24.2■■□□□ 1.46
PDLIM2-216ENST00000464275 PPP1R13BQ96KQ4 1090 aa24.2■■□□□ 1.46
PDLIM2-216ENST00000464275 PANX2Q96RD6 677 aa24.2■■□□□ 1.46
PDLIM2-216ENST00000464275 RLFQ13129 1914 aa24.2■■□□□ 1.46
PDLIM2-216ENST00000464275 LMNB1P20700 586 aa24.2■■□□□ 1.46
PDLIM2-216ENST00000464275 COASYQ13057 564 aa24.2■■□□□ 1.46
PDLIM2-216ENST00000464275 ARHGAP27Q6ZUM4 889 aa24.2■■□□□ 1.46
PDLIM2-216ENST00000464275 MCF2L2Q86YR7 1114 aa24.2■■□□□ 1.46
PDLIM2-216ENST00000464275 KCTD17Q8N5Z5 321 aa24.2■■□□□ 1.46
PDLIM2-216ENST00000464275 TRPM4Q8TD43 1214 aa24.2■■□□□ 1.46
PDLIM2-216ENST00000464275 POLR3CQ9BUI4 534 aaPredicted RBP24.2■■□□□ 1.46
PDLIM2-216ENST00000464275 TANGO6Q9C0B7 1094 aa24.2■■□□□ 1.46
PDLIM2-216ENST00000464275 PANK4Q9NVE7 773 aa24.2■■□□□ 1.46
PDLIM2-216ENST00000464275 PNMA2Q9UL42 364 aa24.2■■□□□ 1.46
PDLIM2-216ENST00000464275 TPM1P09493 284 aa24.19■■□□□ 1.46
PDLIM2-216ENST00000464275 GHRHRQ02643 423 aa24.19■■□□□ 1.46
PDLIM2-216ENST00000464275 RBL2Q08999 1139 aa24.19■■□□□ 1.46
PDLIM2-216ENST00000464275 MTMR2Q13614 643 aa24.19■■□□□ 1.46
PDLIM2-216ENST00000464275 TRIM14Q14142 442 aa24.19■■□□□ 1.46
PDLIM2-216ENST00000464275 GPBP1Q86WP2 473 aa24.19■■□□□ 1.46
PDLIM2-216ENST00000464275 CCDC65Q8IXS2 484 aa24.19■■□□□ 1.46
PDLIM2-216ENST00000464275 SEMA6BQ9H3T3 888 aa24.19■■□□□ 1.46
PDLIM2-216ENST00000464275 SLC38A10Q9HBR0 1119 aa24.19■■□□□ 1.46
PDLIM2-216ENST00000464275 EMILIN3Q9NT22 766 aa24.19■■□□□ 1.46
PDLIM2-216ENST00000464275 PPP2R3BQ9Y5P8 575 aa24.19■■□□□ 1.46
PDLIM2-216ENST00000464275 SPATA31C1P0DKV0 1188 aa24.18■■□□□ 1.46
PDLIM2-216ENST00000464275 VCAM1P19320 739 aa24.18■■□□□ 1.46
PDLIM2-216ENST00000464275 FOXR2Q6PJQ5 311 aa24.18■■□□□ 1.46
PDLIM2-216ENST00000464275 SAMD3Q8N6K7 520 aa24.18■■□□□ 1.46
PDLIM2-216ENST00000464275 SLC5A5Q92911 643 aa24.18■■□□□ 1.46
PDLIM2-216ENST00000464275 PPP1R9AQ9ULJ8 1098 aa24.18■■□□□ 1.46
PDLIM2-216ENST00000464275 DNM3Q9UQ16 869 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms