RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 SYT8Q8NBV8 401 aa7.03□□□□□ -1.28
CD46-211ENST00000464082 TEX13AQ9BXU3 409 aaPredicted RBP7.03□□□□□ -1.28
CD46-211ENST00000464082 OSBPL7Q9BZF2 842 aa7.03□□□□□ -1.28
CD46-211ENST00000464082 EPB41L4AQ9HCS5 686 aaPredicted RBP7.03□□□□□ -1.28
CD46-211ENST00000464082 MBD1Q9UIS9 605 aaPredicted RBP7.03□□□□□ -1.28
CD46-211ENST00000464082 PPM1HQ9ULR3 514 aa7.03□□□□□ -1.28
CD46-211ENST00000464082 DDX60Q8IY21 1712 aaKnown RBP7.03□□□□□ -1.28
CD46-211ENST00000464082 EFEMP2O95967 443 aa7.02□□□□□ -1.29
CD46-211ENST00000464082 SNRPA1P09661 255 aaKnown RBP7.02□□□□□ -1.29
CD46-211ENST00000464082 CHRNA5P30532 468 aa7.02□□□□□ -1.29
CD46-211ENST00000464082 AFF3P51826 1226 aaKnown RBP7.02□□□□□ -1.29
CD46-211ENST00000464082 EIF4A1P60842 406 aaKnown RBP7.02□□□□□ -1.29
CD46-211ENST00000464082 LRP10Q7Z4F1 713 aa7.02□□□□□ -1.29
CD46-211ENST00000464082 TSPYL5Q86VY4 417 aaPredicted RBP7.02□□□□□ -1.29
CD46-211ENST00000464082 SIRT2Q8IXJ6 389 aa7.02□□□□□ -1.29
CD46-211ENST00000464082 CCDC146Q8IYE0 955 aa7.02□□□□□ -1.29
CD46-211ENST00000464082 RTF1Q92541 710 aaKnown RBP7.02□□□□□ -1.29
CD46-211ENST00000464082 ADAM7Q9H2U9 754 aa7.02□□□□□ -1.29
CD46-211ENST00000464082 TRIT1Q9H3H1 467 aaKnown RBP7.02□□□□□ -1.29
CD46-211ENST00000464082 TJP2Q9UDY2 1190 aa7.02□□□□□ -1.29
CD46-211ENST00000464082 IRAK3Q9Y616 596 aa7.02□□□□□ -1.29
CD46-211ENST00000464082 SLC22A31A6NKX4 558 aa7.01□□□□□ -1.29
CD46-211ENST00000464082 GRIN3BO60391 1043 aa7.01□□□□□ -1.29
CD46-211ENST00000464082 SERPINB2P05120 415 aa7.01□□□□□ -1.29
CD46-211ENST00000464082 PRELPP51888 382 aa7.01□□□□□ -1.29
CD46-211ENST00000464082 EPHB3P54753 998 aa7.01□□□□□ -1.29
CD46-211ENST00000464082 RIPK4P57078 832 aa7.01□□□□□ -1.29
CD46-211ENST00000464082 DNAJB8Q8NHS0 232 aa7.01□□□□□ -1.29
CD46-211ENST00000464082 SIGLEC10Q96LC7 697 aa7.01□□□□□ -1.29
CD46-211ENST00000464082 GPR62Q9BZJ7 368 aa7.01□□□□□ -1.29
CD46-211ENST00000464082 GPATCH2Q9NW75 528 aa7.01□□□□□ -1.29
CD46-211ENST00000464082 RRP7AQ9Y3A4 280 aaKnown RBP7.01□□□□□ -1.29
CD46-211ENST00000464082 ATP10DQ9P241 1426 aa7.01□□□□□ -1.29
CD46-211ENST00000464082 MYH3P11055 1940 aa7□□□□□ -1.29
CD46-211ENST00000464082 NOTOA8MTQ0 251 aa7□□□□□ -1.29
CD46-211ENST00000464082 SRSF3P84103 164 aaKnown RBP7□□□□□ -1.29
CD46-211ENST00000464082 DSC3Q14574 896 aa7□□□□□ -1.29
CD46-211ENST00000464082 ENOX2Q16206 610 aaKnown RBP7□□□□□ -1.29
CD46-211ENST00000464082 KRT24Q2M2I5 525 aa7□□□□□ -1.29
CD46-211ENST00000464082 ZXDCQ2QGD7 858 aaPredicted RBP7□□□□□ -1.29
CD46-211ENST00000464082 PRR5LQ6MZQ0 368 aa7□□□□□ -1.29
CD46-211ENST00000464082 DHX38Q92620 1227 aaKnown RBP7□□□□□ -1.29
CD46-211ENST00000464082 RUNDC1Q96C34 613 aa7□□□□□ -1.29
CD46-211ENST00000464082 MAPK8IP3Q9UPT6 1336 aa7□□□□□ -1.29
CD46-211ENST00000464082 A0A087WZG4 1122 aa6.99□□□□□ -1.29
CD46-211ENST00000464082 GFRA2O00451 464 aa6.99□□□□□ -1.29
CD46-211ENST00000464082 ZEB1P37275 1124 aaPredicted RBP6.99□□□□□ -1.29
CD46-211ENST00000464082 ETV3P41162 512 aa6.99□□□□□ -1.29
CD46-211ENST00000464082 SNX17Q15036 470 aa6.99□□□□□ -1.29
CD46-211ENST00000464082 HLFQ16534 295 aa6.99□□□□□ -1.29
CD46-211ENST00000464082 SPPL2CQ8IUH8 684 aa6.99□□□□□ -1.29
CD46-211ENST00000464082 MRPL41Q8IXM3 137 aaKnown RBP6.99□□□□□ -1.29
CD46-211ENST00000464082 DTWD2Q8NBA8 298 aa6.99□□□□□ -1.29
CD46-211ENST00000464082 SNED1Q8TER0 1413 aa6.99□□□□□ -1.29
CD46-211ENST00000464082 COL4A1P02462 1669 aa6.99□□□□□ -1.29
CD46-211ENST00000464082 CHL1O00533 1208 aa6.98□□□□□ -1.29
CD46-211ENST00000464082 ZNF853P0CG23 659 aa6.98□□□□□ -1.29
CD46-211ENST00000464082 PROSER3Q2NL68 480 aa6.98□□□□□ -1.29
CD46-211ENST00000464082 ADGRF1Q5T601 910 aa6.98□□□□□ -1.29
CD46-211ENST00000464082 B4GALNT3Q6L9W6 998 aa6.98□□□□□ -1.29
CD46-211ENST00000464082 TTLL7Q6ZT98 887 aa6.98□□□□□ -1.29
CD46-211ENST00000464082 PNISRQ8TF01 805 aaKnown RBP6.98□□□□□ -1.29
CD46-211ENST00000464082 PPP1R13LQ8WUF5 828 aa6.98□□□□□ -1.29
CD46-211ENST00000464082 BORCS6Q96GS4 357 aa6.98□□□□□ -1.29
CD46-211ENST00000464082 TMEM87BQ96K49 555 aa6.98□□□□□ -1.29
CD46-211ENST00000464082 SETDB2Q96T68 719 aa6.98□□□□□ -1.29
CD46-211ENST00000464082 PNNQ9H307 717 aaKnown RBP6.98□□□□□ -1.29
CD46-211ENST00000464082 BABAM1Q9NWV8 329 aa6.98□□□□□ -1.29
CD46-211ENST00000464082 TSPYL4Q9UJ04 414 aa6.98□□□□□ -1.29
CD46-211ENST00000464082 LRRC37AA6NMS7 1700 aa6.98□□□□□ -1.29
CD46-211ENST00000464082 UBN2Q6ZU65 1347 aa6.98□□□□□ -1.29
CD46-211ENST00000464082 ABCC12Q96J65 1359 aa6.97□□□□□ -1.29
CD46-211ENST00000464082 OR14I1A6ND48 311 aa6.97□□□□□ -1.29
CD46-211ENST00000464082 LRRN2O75325 713 aa6.97□□□□□ -1.29
CD46-211ENST00000464082 ANXA1P04083 346 aa6.97□□□□□ -1.29
CD46-211ENST00000464082 EFEMP1Q12805 493 aa6.97□□□□□ -1.29
CD46-211ENST00000464082 CLEC4GQ6UXB4 293 aa6.97□□□□□ -1.29
CD46-211ENST00000464082 WDR90Q96KV7 1748 aa6.97□□□□□ -1.29
CD46-211ENST00000464082 CEP131Q9UPN4 1083 aa6.97□□□□□ -1.29
CD46-211ENST00000464082 CEP350Q5VT06 3117 aa6.97□□□□□ -1.29
CD46-211ENST00000464082 MAP3K15Q6ZN16 1313 aa6.97□□□□□ -1.29
CD46-211ENST00000464082 SPEF2Q9C093 1822 aa6.97□□□□□ -1.29
CD46-211ENST00000464082 LTBP1Q14766 1721 aa6.96□□□□□ -1.29
CD46-211ENST00000464082 RIC1Q4ADV7 1423 aa6.96□□□□□ -1.3
CD46-211ENST00000464082 KLRG2A4D1S0 409 aaPredicted RBP6.96□□□□□ -1.3
CD46-211ENST00000464082 APAF1O14727 1248 aa6.96□□□□□ -1.3
CD46-211ENST00000464082 PGRP06401 933 aa6.96□□□□□ -1.3
CD46-211ENST00000464082 INSRRP14616 1297 aa6.96□□□□□ -1.3
CD46-211ENST00000464082 PLCB3Q01970 1234 aa6.96□□□□□ -1.3
CD46-211ENST00000464082 CHRNEQ04844 493 aa6.96□□□□□ -1.3
CD46-211ENST00000464082 WDR43Q15061 677 aaKnown RBP eCLIP6.96□□□□□ -1.3
CD46-211ENST00000464082 DALRD3Q5D0E6 543 aaKnown RBP6.96□□□□□ -1.3
CD46-211ENST00000464082 ERICH6BQ5W0A0 696 aa6.96□□□□□ -1.3
CD46-211ENST00000464082 C2CD5Q86YS7 1000 aa6.96□□□□□ -1.3
CD46-211ENST00000464082 LINC01599Q8WXQ3 324 aa6.96□□□□□ -1.3
CD46-211ENST00000464082 BRIP1Q9BX63 1249 aa6.96□□□□□ -1.3
CD46-211ENST00000464082 SRCIN1Q9C0H9 1055 aa6.96□□□□□ -1.3
CD46-211ENST00000464082 CNTD2Q9H8S5 307 aa6.96□□□□□ -1.3
CD46-211ENST00000464082 SIRT5Q9NXA8 310 aa6.96□□□□□ -1.3
CD46-211ENST00000464082 IBTKQ9P2D0 1353 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms