RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 STOX1Q6ZVD7 989 aa23■■□□□ 1.27
VARS-221ENST00000463184 HLA-CQ95604 372 aa23■■□□□ 1.27
VARS-221ENST00000463184 PDCD2LQ9BRP1 358 aa23■■□□□ 1.27
VARS-221ENST00000463184 LMCD1Q9NZU5 365 aa23■■□□□ 1.27
VARS-221ENST00000463184 LPXNO60711 386 aa22.99■■□□□ 1.27
VARS-221ENST00000463184 MYCLP12524 364 aaPredicted RBP22.99■■□□□ 1.27
VARS-221ENST00000463184 DEFB103AP81534 67 aa22.99■■□□□ 1.27
VARS-221ENST00000463184 IKBKEQ14164 716 aa22.99■■□□□ 1.27
VARS-221ENST00000463184 MYSM1Q5VVJ2 828 aa22.99■■□□□ 1.27
VARS-221ENST00000463184 RAD9AQ99638 391 aa22.99■■□□□ 1.27
VARS-221ENST00000463184 PCDHA1Q9Y5I3 950 aa22.99■■□□□ 1.27
VARS-221ENST00000463184 LCHNA4D1U4 455 aa22.98■■□□□ 1.27
VARS-221ENST00000463184 RGS20O76081 388 aa22.98■■□□□ 1.27
VARS-221ENST00000463184 GJB5O95377 273 aa22.98■■□□□ 1.27
VARS-221ENST00000463184 ZNF286BP0CG31 522 aa22.98■■□□□ 1.27
VARS-221ENST00000463184 TGFB3P10600 412 aa22.98■■□□□ 1.27
VARS-221ENST00000463184 TRAF1Q13077 416 aa22.98■■□□□ 1.27
VARS-221ENST00000463184 SEC23AQ15436 765 aa22.98■■□□□ 1.27
VARS-221ENST00000463184 TRIM71Q2Q1W2 868 aaKnown RBP22.98■■□□□ 1.27
VARS-221ENST00000463184 CELF3Q5SZQ8 465 aaKnown RBP22.98■■□□□ 1.27
VARS-221ENST00000463184 VSIG10LQ86VR7 867 aa22.98■■□□□ 1.27
VARS-221ENST00000463184 SPATA33Q96N06 139 aa22.98■■□□□ 1.27
VARS-221ENST00000463184 C1QTNF1Q9BXJ1 281 aa22.98■■□□□ 1.27
VARS-221ENST00000463184 MAD2L2Q9UI95 211 aa22.98■■□□□ 1.27
VARS-221ENST00000463184 PALM3A6NDB9 673 aaPredicted RBP22.97■■□□□ 1.27
VARS-221ENST00000463184 PPP1R11O60927 126 aaPredicted RBP22.97■■□□□ 1.27
VARS-221ENST00000463184 NEFLP07196 543 aa22.97■■□□□ 1.27
VARS-221ENST00000463184 PGM5Q15124 567 aa22.97■■□□□ 1.27
VARS-221ENST00000463184 ZNF618Q5T7W0 954 aa22.97■■□□□ 1.27
VARS-221ENST00000463184 TRAF7Q6Q0C0 670 aa22.97■■□□□ 1.27
VARS-221ENST00000463184 TMCO2Q7Z6W1 182 aaPredicted RBP22.97■■□□□ 1.27
VARS-221ENST00000463184 TCTN1Q2MV58 587 aa22.96■■□□□ 1.27
VARS-221ENST00000463184 SPRED2Q7Z698 418 aa22.96■■□□□ 1.27
VARS-221ENST00000463184 MYH7BA7E2Y1 1941 aa22.96■■□□□ 1.27
VARS-221ENST00000463184 PTPRSQ13332 1948 aa22.96■■□□□ 1.27
VARS-221ENST00000463184 GGPS1O95749 300 aa22.95■■□□□ 1.26
VARS-221ENST00000463184 HOXA13P31271 388 aaPredicted RBP22.95■■□□□ 1.26
VARS-221ENST00000463184 ERVK-21P61565 698 aa22.95■■□□□ 1.26
VARS-221ENST00000463184 ZNF200P98182 395 aaPredicted RBP22.95■■□□□ 1.26
VARS-221ENST00000463184 TRDNQ13061 729 aa22.95■■□□□ 1.26
VARS-221ENST00000463184 HSDL1Q3SXM5 330 aa22.95■■□□□ 1.26
VARS-221ENST00000463184 CYB5R4Q7L1T6 521 aa22.95■■□□□ 1.26
VARS-221ENST00000463184 EMSYQ7Z589 1322 aa22.95■■□□□ 1.26
VARS-221ENST00000463184 WNT8BQ93098 351 aa22.95■■□□□ 1.26
VARS-221ENST00000463184 TGS1Q96RS0 853 aaKnown RBP22.95■■□□□ 1.26
VARS-221ENST00000463184 BDP1A6H8Y1 2624 aa22.94■■□□□ 1.26
VARS-221ENST00000463184 GCOM1H8Y6P7 765 aaPredicted RBP22.94■■□□□ 1.26
VARS-221ENST00000463184 LGR5O75473 907 aa22.94■■□□□ 1.26
VARS-221ENST00000463184 POLR2MP0CAP2 368 aa22.94■■□□□ 1.26
VARS-221ENST00000463184 CCND2P30279 289 aa22.94■■□□□ 1.26
VARS-221ENST00000463184 SP2Q02086 613 aa22.94■■□□□ 1.26
VARS-221ENST00000463184 C16orf70Q9BSU1 422 aa22.94■■□□□ 1.26
VARS-221ENST00000463184 RIOX1Q9H6W3 641 aa22.94■■□□□ 1.26
VARS-221ENST00000463184 SUGCTQ9HAC7 445 aa22.94■■□□□ 1.26
VARS-221ENST00000463184 MLXIPQ9HAP2 919 aa22.94■■□□□ 1.26
VARS-221ENST00000463184 LINC01553A4QN01 128 aa22.93■■□□□ 1.26
VARS-221ENST00000463184 UBA1P22314 1058 aaKnown RBP22.93■■□□□ 1.26
VARS-221ENST00000463184 MBTPS1Q14703 1052 aa22.93■■□□□ 1.26
VARS-221ENST00000463184 GRM4Q14833 912 aa22.93■■□□□ 1.26
VARS-221ENST00000463184 SERINC5Q86VE9 423 aa22.93■■□□□ 1.26
VARS-221ENST00000463184 HOMER1Q86YM7 354 aa22.93■■□□□ 1.26
VARS-221ENST00000463184 GDPD5Q8WTR4 605 aa22.93■■□□□ 1.26
VARS-221ENST00000463184 IL25Q9H293 177 aa22.93■■□□□ 1.26
VARS-221ENST00000463184 RAPGEFL1Q9UHV5 662 aa22.93■■□□□ 1.26
VARS-221ENST00000463184 INSL6Q9Y581 213 aa22.93■■□□□ 1.26
VARS-221ENST00000463184 RSPH10B2B2RC85 870 aa22.92■■□□□ 1.26
VARS-221ENST00000463184 SORBS3O60504 671 aa22.92■■□□□ 1.26
VARS-221ENST00000463184 RSPH10BP0C881 870 aa22.92■■□□□ 1.26
VARS-221ENST00000463184 THPOP40225 353 aa22.92■■□□□ 1.26
VARS-221ENST00000463184 HIC1Q14526 733 aa22.92■■□□□ 1.26
VARS-221ENST00000463184 IL31RAQ8NI17 732 aa22.92■■□□□ 1.26
VARS-221ENST00000463184 PIGSQ96S52 555 aa22.92■■□□□ 1.26
VARS-221ENST00000463184 MTUS1Q9ULD2 1270 aa22.92■■□□□ 1.26
VARS-221ENST00000463184 ERICH2A1L162 156 aa22.91■■□□□ 1.26
VARS-221ENST00000463184 C17orf102A2RUQ5 167 aa22.91■■□□□ 1.26
VARS-221ENST00000463184 H3BRB1 525 aa22.91■■□□□ 1.26
VARS-221ENST00000463184 FCHSD1Q86WN1 690 aa22.91■■□□□ 1.26
VARS-221ENST00000463184 DBF4BQ8NFT6 615 aa22.91■■□□□ 1.26
VARS-221ENST00000463184 ATP6V0A1Q93050 837 aa22.91■■□□□ 1.26
VARS-221ENST00000463184 TUT1Q9H6E5 874 aaKnown RBP22.91■■□□□ 1.26
VARS-221ENST00000463184 U3KPZ7 1027 aaPredicted RBP22.91■■□□□ 1.26
VARS-221ENST00000463184 PNMA6FA0A0J9YX94 578 aa22.9■■□□□ 1.26
VARS-221ENST00000463184 IFIT3O14879 490 aaKnown RBP22.9■■□□□ 1.26
VARS-221ENST00000463184 STAM2O75886 525 aa22.9■■□□□ 1.26
VARS-221ENST00000463184 AMHP03971 560 aa22.9■■□□□ 1.26
VARS-221ENST00000463184 SLC35G1Q2M3R5 365 aa22.9■■□□□ 1.26
VARS-221ENST00000463184 GNPTABQ3T906 1256 aa22.9■■□□□ 1.26
VARS-221ENST00000463184 FAM117BQ6P1L5 589 aa22.9■■□□□ 1.26
VARS-221ENST00000463184 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.9■■□□□ 1.26
VARS-221ENST00000463184 GPKOWQ92917 476 aaPredicted RBP eCLIP22.9■■□□□ 1.26
VARS-221ENST00000463184 HOXC8P31273 242 aa22.89■■□□□ 1.25
VARS-221ENST00000463184 MKRN4PQ13434 485 aaPredicted RBP22.89■■□□□ 1.25
VARS-221ENST00000463184 PLEKHG4Q58EX7 1191 aa22.89■■□□□ 1.25
VARS-221ENST00000463184 ZFP91Q96JP5 570 aaPredicted RBP22.89■■□□□ 1.25
VARS-221ENST00000463184 USP26Q9BXU7 913 aa22.89■■□□□ 1.25
VARS-221ENST00000463184 COL4A4P53420 1690 aaPredicted RBP22.89■■□□□ 1.25
VARS-221ENST00000463184 NOP56O00567 594 aaKnown RBP22.88■■□□□ 1.25
VARS-221ENST00000463184 CYTH3O43739 400 aa22.88■■□□□ 1.25
VARS-221ENST00000463184 CAND2O75155 1236 aa22.88■■□□□ 1.25
VARS-221ENST00000463184 LGALS2P05162 132 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms