RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 SP2Q02086 613 aa8.39□□□□□ -1.07
PTPRF-210ENST00000463041 RAB30Q15771 203 aa8.39□□□□□ -1.07
PTPRF-210ENST00000463041 PTGISQ16647 500 aa8.39□□□□□ -1.07
PTPRF-210ENST00000463041 GDF6Q6KF10 455 aaPredicted RBP8.39□□□□□ -1.07
PTPRF-210ENST00000463041 USP17L6PQ6QN14 398 aa8.39□□□□□ -1.07
PTPRF-210ENST00000463041 OTOP2Q7RTS6 562 aa8.39□□□□□ -1.07
PTPRF-210ENST00000463041 SKAP1Q86WV1 359 aa8.39□□□□□ -1.07
PTPRF-210ENST00000463041 TEX2Q8IWB9 1127 aa8.39□□□□□ -1.07
PTPRF-210ENST00000463041 CCDC155Q8N6L0 562 aa8.39□□□□□ -1.07
PTPRF-210ENST00000463041 C7orf31Q8N865 590 aa8.39□□□□□ -1.07
PTPRF-210ENST00000463041 IL31RAQ8NI17 732 aa8.39□□□□□ -1.07
PTPRF-210ENST00000463041 CAGE1Q8TC20 777 aa8.39□□□□□ -1.07
PTPRF-210ENST00000463041 TIFAQ96CG3 184 aa8.39□□□□□ -1.07
PTPRF-210ENST00000463041 SCLYQ96I15 445 aa8.39□□□□□ -1.07
PTPRF-210ENST00000463041 SPATA33Q96N06 139 aa8.39□□□□□ -1.07
PTPRF-210ENST00000463041 INPP4AQ96PE3 977 aaPredicted RBP8.39□□□□□ -1.07
PTPRF-210ENST00000463041 SENP7Q9BQF6 1050 aa8.39□□□□□ -1.07
PTPRF-210ENST00000463041 LRRC2Q9BYS8 371 aa8.39□□□□□ -1.07
PTPRF-210ENST00000463041 ZNF576Q9H609 170 aa8.39□□□□□ -1.07
PTPRF-210ENST00000463041 RBM28Q9NW13 759 aaKnown RBP8.39□□□□□ -1.07
PTPRF-210ENST00000463041 SLC4A7Q9Y6M7 1214 aa8.39□□□□□ -1.07
PTPRF-210ENST00000463041 UNC80Q8N2C7 3258 aa8.39□□□□□ -1.07
PTPRF-210ENST00000463041 CDH23Q9H251 3354 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 GRXCR1A8MXD5 290 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 MAFGO15525 162 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 ZBTB43O43298 467 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 FIBPO43427 364 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 F2P00734 622 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 RXRAP19793 462 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 PTK7Q13308 1070 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 COL9A3Q14050 684 aaPredicted RBP8.38□□□□□ -1.07
PTPRF-210ENST00000463041 MFSD10Q14728 455 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 KIAA0753Q2KHM9 967 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 HSDL1Q3SXM5 330 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 PCNX4Q63HM2 1172 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 TMTC3Q6ZXV5 915 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 DEFB128Q7Z7B8 93 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 NLRX1Q86UT6 975 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 RASEFQ8IZ41 740 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 CCDC82Q8N4S0 544 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 GIMAP8Q8ND71 665 aaPredicted RBP8.38□□□□□ -1.07
PTPRF-210ENST00000463041 PHOSPHO2Q8TCD6 241 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 AFAP1L1Q8TED9 768 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 KCNB2Q92953 911 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 VWCEQ96DN2 955 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 CDHR1Q96JP9 859 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 ALG1Q9BT22 464 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 USP26Q9BXU7 913 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 PBX4Q9BYU1 374 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 FTOQ9C0B1 505 aaKnown RBP eCLIP8.38□□□□□ -1.07
PTPRF-210ENST00000463041 RTEL1Q9NZ71 1219 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 CXXC1Q9P0U4 656 aaPredicted RBP8.38□□□□□ -1.07
PTPRF-210ENST00000463041 HDAC6Q9UBN7 1215 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 GTF2IRD1Q9UHL9 959 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 CHD9Q3L8U1 2897 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 CUL9Q8IWT3 2517 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 EYSQ5T1H1 3165 aa8.38□□□□□ -1.07
PTPRF-210ENST00000463041 GBF1Q92538 1859 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 DOCK5Q9H7D0 1870 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 H3BRB1 525 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 SELPP16109 830 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 UBA1P22314 1058 aaKnown RBP8.37□□□□□ -1.07
PTPRF-210ENST00000463041 PBX2P40425 430 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 RCAN1P53805 252 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 RBL2Q08999 1139 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 GRIN2CQ14957 1233 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 RTN1Q16799 776 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 ADCK5Q3MIX3 580 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 APOA5Q6Q788 366 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 METTL7BQ6UX53 244 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 CYFIP1Q7L576 1253 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 MICU3Q86XE3 530 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 CMTR1Q8N1G2 835 aaKnown RBP8.37□□□□□ -1.07
PTPRF-210ENST00000463041 PPP1R13LQ8WUF5 828 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 MYLIPQ8WY64 445 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 GPKOWQ92917 476 aaPredicted RBP eCLIP8.37□□□□□ -1.07
PTPRF-210ENST00000463041 ZFP91Q96JP5 570 aaPredicted RBP8.37□□□□□ -1.07
PTPRF-210ENST00000463041 CTAGE1Q96RT6 745 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 C16orf70Q9BSU1 422 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 GLT8D2Q9H1C3 349 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 TUT1Q9H6E5 874 aaKnown RBP8.37□□□□□ -1.07
PTPRF-210ENST00000463041 EHMT1Q9H9B1 1298 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 SLC28A3Q9HAS3 691 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 PCDHA11Q9Y5I1 949 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 V9GY48 417 aaPredicted RBP8.37□□□□□ -1.07
PTPRF-210ENST00000463041 CHD7Q9P2D1 2997 aa8.37□□□□□ -1.07
PTPRF-210ENST00000463041 CCDC196A0A1B0GTZ2 297 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 hCG_1642624A0A1W2PR95 340 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 SPDYE3A6NKU9 549 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 ZBBXA8MT70 800 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 KIF28PB7ZC32 967 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 NOP56O00567 594 aaKnown RBP8.36□□□□□ -1.07
PTPRF-210ENST00000463041 EPB41L2O43491 1005 aaKnown RBP8.36□□□□□ -1.07
PTPRF-210ENST00000463041 BAIAP3O94812 1187 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 REC8O95072 547 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 FOSP01100 380 aaPredicted RBP8.36□□□□□ -1.07
PTPRF-210ENST00000463041 ZNF286BP0CG31 522 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 GNAT1P11488 350 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 CKBP12277 381 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 FOSL2P15408 326 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms