RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 PPTC7Q8NI37 304 aa18.32■□□□□ 0.52
SND1-203ENST00000463020 ESR2Q92731 530 aa18.32■□□□□ 0.52
SND1-203ENST00000463020 IWS1Q96ST2 819 aa18.32■□□□□ 0.52
SND1-203ENST00000463020 LMCD1Q9NZU5 365 aa18.32■□□□□ 0.52
SND1-203ENST00000463020 TELO2Q9Y4R8 837 aa18.32■□□□□ 0.52
SND1-203ENST00000463020 MRVI1Q9Y6F6 885 aa18.32■□□□□ 0.52
SND1-203ENST00000463020 B4DLN1 442 aa18.31■□□□□ 0.52
SND1-203ENST00000463020 MRPL12P52815 198 aaKnown RBP18.31■□□□□ 0.52
SND1-203ENST00000463020 FBXO11Q86XK2 927 aa18.31■□□□□ 0.52
SND1-203ENST00000463020 FAM178BQ8IXR5 827 aa18.31■□□□□ 0.52
SND1-203ENST00000463020 DBF4BQ8NFT6 615 aa18.31■□□□□ 0.52
SND1-203ENST00000463020 ANKS1AQ92625 1134 aa18.31■□□□□ 0.52
SND1-203ENST00000463020 HCN4Q9Y3Q4 1203 aa18.31■□□□□ 0.52
SND1-203ENST00000463020 EIF3JO75822 258 aaKnown RBP18.3■□□□□ 0.52
SND1-203ENST00000463020 CFBP00751 764 aa18.3■□□□□ 0.52
SND1-203ENST00000463020 SDSP20132 328 aa18.3■□□□□ 0.52
SND1-203ENST00000463020 HOXA13P31271 388 aaPredicted RBP18.3■□□□□ 0.52
SND1-203ENST00000463020 HSD17B4P51659 736 aa18.3■□□□□ 0.52
SND1-203ENST00000463020 IKBKEQ14164 716 aa18.3■□□□□ 0.52
SND1-203ENST00000463020 LEXMQ3ZCV2 418 aa18.3■□□□□ 0.52
SND1-203ENST00000463020 MYSM1Q5VVJ2 828 aa18.3■□□□□ 0.52
SND1-203ENST00000463020 RILPL2Q969X0 211 aa18.3■□□□□ 0.52
SND1-203ENST00000463020 ZSCAN10Q96SZ4 725 aaPredicted RBP18.3■□□□□ 0.52
SND1-203ENST00000463020 C16orf70Q9BSU1 422 aa18.3■□□□□ 0.52
SND1-203ENST00000463020 LNPKQ9C0E8 428 aa18.3■□□□□ 0.52
SND1-203ENST00000463020 IL25Q9H293 177 aa18.3■□□□□ 0.52
SND1-203ENST00000463020 KAT14Q9H8E8 782 aa18.3■□□□□ 0.52
SND1-203ENST00000463020 MICAL3Q7RTP6 2002 aa18.3■□□□□ 0.52
SND1-203ENST00000463020 TRIM6-TRIM34B2RNG4 842 aa18.29■□□□□ 0.52
SND1-203ENST00000463020 H3BQ06 376 aaPredicted RBP18.29■□□□□ 0.52
SND1-203ENST00000463020 PCP11498 1178 aaKnown RBP18.29■□□□□ 0.52
SND1-203ENST00000463020 MYCLP12524 364 aaPredicted RBP18.29■□□□□ 0.52
SND1-203ENST00000463020 UBA1P22314 1058 aaKnown RBP18.29■□□□□ 0.52
SND1-203ENST00000463020 HTRA4P83105 476 aaPredicted RBP18.29■□□□□ 0.52
SND1-203ENST00000463020 LAMC2Q13753 1193 aa18.29■□□□□ 0.52
SND1-203ENST00000463020 SERINC5Q86VE9 423 aa18.29■□□□□ 0.52
SND1-203ENST00000463020 DHX37Q8IY37 1157 aaKnown RBP18.29■□□□□ 0.52
SND1-203ENST00000463020 MYOCDQ8IZQ8 938 aa18.29■□□□□ 0.52
SND1-203ENST00000463020 FBXO22Q8NEZ5 403 aa18.29■□□□□ 0.52
SND1-203ENST00000463020 SP7Q8TDD2 431 aaPredicted RBP18.29■□□□□ 0.52
SND1-203ENST00000463020 PDCD2LQ9BRP1 358 aa18.29■□□□□ 0.52
SND1-203ENST00000463020 ZSWIM5Q9P217 1185 aa18.29■□□□□ 0.52
SND1-203ENST00000463020 PIEZO1Q92508 2521 aa18.29■□□□□ 0.52
SND1-203ENST00000463020 MYH7BA7E2Y1 1941 aa18.29■□□□□ 0.52
SND1-203ENST00000463020 ZNF213O14771 459 aa18.28■□□□□ 0.52
SND1-203ENST00000463020 DHX16O60231 1041 aaKnown RBP18.28■□□□□ 0.52
SND1-203ENST00000463020 GGPS1O95749 300 aa18.28■□□□□ 0.52
SND1-203ENST00000463020 HOXC8P31273 242 aa18.28■□□□□ 0.52
SND1-203ENST00000463020 THPOP40225 353 aa18.28■□□□□ 0.52
SND1-203ENST00000463020 RRP1P56182 461 aaKnown RBP18.28■□□□□ 0.52
SND1-203ENST00000463020 GHRHRQ02643 423 aa18.28■□□□□ 0.52
SND1-203ENST00000463020 ASPRV1Q53RT3 343 aa18.28■□□□□ 0.52
SND1-203ENST00000463020 CELF3Q5SZQ8 465 aaKnown RBP18.28■□□□□ 0.52
SND1-203ENST00000463020 MCF2L2Q86YR7 1114 aa18.28■□□□□ 0.52
SND1-203ENST00000463020 GJD3Q8N144 294 aa18.28■□□□□ 0.52
SND1-203ENST00000463020 SPATA33Q96N06 139 aa18.28■□□□□ 0.52
SND1-203ENST00000463020 KATNAL1Q9BW62 490 aa18.28■□□□□ 0.52
SND1-203ENST00000463020 RNF41Q9H4P4 317 aaPredicted RBP18.28■□□□□ 0.52
SND1-203ENST00000463020 MRPL11Q9Y3B7 192 aaKnown RBP18.28■□□□□ 0.52
SND1-203ENST00000463020 ARIH1Q9Y4X5 557 aaPredicted RBP18.28■□□□□ 0.52
SND1-203ENST00000463020 ATG2AQ2TAZ0 1938 aa18.27■□□□□ 0.52
SND1-203ENST00000463020 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.27■□□□□ 0.52
SND1-203ENST00000463020 PARNO95453 639 aaKnown RBP18.27■□□□□ 0.52
SND1-203ENST00000463020 PARP1P09874 1014 aaKnown RBP18.27■□□□□ 0.52
SND1-203ENST00000463020 HDAC1Q13547 482 aaPredicted RBP18.27■□□□□ 0.52
SND1-203ENST00000463020 PGM5Q15124 567 aa18.27■□□□□ 0.52
SND1-203ENST00000463020 EPC2Q52LR7 807 aa18.27■□□□□ 0.52
SND1-203ENST00000463020 PLEKHG4Q58EX7 1191 aa18.27■□□□□ 0.52
SND1-203ENST00000463020 PTCRAQ6ISU1 281 aaPredicted RBP18.27■□□□□ 0.52
SND1-203ENST00000463020 MTMR8Q96EF0 704 aa18.27■□□□□ 0.52
SND1-203ENST00000463020 MYH6P13533 1939 aa18.27■□□□□ 0.51
SND1-203ENST00000463020 GRXCR2A6NFK2 248 aa18.26■□□□□ 0.51
SND1-203ENST00000463020 RSPH10B2B2RC85 870 aa18.26■□□□□ 0.51
SND1-203ENST00000463020 TREHO43280 583 aa18.26■□□□□ 0.51
SND1-203ENST00000463020 CTSHP09668 335 aa18.26■□□□□ 0.51
SND1-203ENST00000463020 RSPH10BP0C881 870 aa18.26■□□□□ 0.51
SND1-203ENST00000463020 CWC27Q6UX04 472 aaKnown RBP18.26■□□□□ 0.51
SND1-203ENST00000463020 STOX1Q6ZVD7 989 aa18.26■□□□□ 0.51
SND1-203ENST00000463020 VSIG10LQ86VR7 867 aa18.26■□□□□ 0.51
SND1-203ENST00000463020 NEK9Q8TD19 979 aa18.26■□□□□ 0.51
SND1-203ENST00000463020 MAF1Q9H063 256 aa18.26■□□□□ 0.51
SND1-203ENST00000463020 SENP2Q9HC62 589 aa18.26■□□□□ 0.51
SND1-203ENST00000463020 MAD2L2Q9UI95 211 aa18.26■□□□□ 0.51
SND1-203ENST00000463020 INSL6Q9Y581 213 aa18.26■□□□□ 0.51
SND1-203ENST00000463020 SMIM10L2AP0DMW4 78 aa18.25■□□□□ 0.51
SND1-203ENST00000463020 SMIM10L2BP0DMW5 78 aa18.25■□□□□ 0.51
SND1-203ENST00000463020 SEMA3FQ13275 785 aa18.25■□□□□ 0.51
SND1-203ENST00000463020 TCEAL5Q5H9L2 206 aa18.25■□□□□ 0.51
SND1-203ENST00000463020 CYB5R4Q7L1T6 521 aa18.25■□□□□ 0.51
SND1-203ENST00000463020 IQCA1Q86XH1 822 aa18.25■□□□□ 0.51
SND1-203ENST00000463020 MRPL38Q96DV4 380 aaKnown RBP18.25■□□□□ 0.51
SND1-203ENST00000463020 EFCAB14O75071 495 aa18.24■□□□□ 0.51
SND1-203ENST00000463020 PPFIA4O75335 1185 aa18.24■□□□□ 0.51
SND1-203ENST00000463020 UPP2O95045 317 aa18.24■□□□□ 0.51
SND1-203ENST00000463020 AMHP03971 560 aa18.24■□□□□ 0.51
SND1-203ENST00000463020 LGALS2P05162 132 aa18.24■□□□□ 0.51
SND1-203ENST00000463020 LINC00271P0C7V0 271 aa18.24■□□□□ 0.51
SND1-203ENST00000463020 SSTR3P32745 418 aaPredicted RBP18.24■□□□□ 0.51
SND1-203ENST00000463020 SEC23AQ15436 765 aa18.24■□□□□ 0.51
SND1-203ENST00000463020 B4GALNT3Q6L9W6 998 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms