RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 NTRK3Q16288 839 aa21.23■□□□□ 0.99
CDKN1A-206ENST00000462537 DGKDQ16760 1214 aa21.23■□□□□ 0.99
CDKN1A-206ENST00000462537 CELF3Q5SZQ8 465 aaKnown RBP21.23■□□□□ 0.99
CDKN1A-206ENST00000462537 NLRX1Q86UT6 975 aa21.23■□□□□ 0.99
CDKN1A-206ENST00000462537 CCDC12Q8WUD4 166 aaPredicted RBP21.23■□□□□ 0.99
CDKN1A-206ENST00000462537 EMID1Q96A84 441 aaPredicted RBP21.23■□□□□ 0.99
CDKN1A-206ENST00000462537 PGBD1Q96JS3 809 aa21.23■□□□□ 0.99
CDKN1A-206ENST00000462537 SPATA33Q96N06 139 aa21.23■□□□□ 0.99
CDKN1A-206ENST00000462537 INPP4AQ96PE3 977 aaPredicted RBP21.23■□□□□ 0.99
CDKN1A-206ENST00000462537 RNF26Q9BY78 433 aaPredicted RBP21.23■□□□□ 0.99
CDKN1A-206ENST00000462537 MLXIPQ9HAP2 919 aa21.23■□□□□ 0.99
CDKN1A-206ENST00000462537 FIBPO43427 364 aa21.22■□□□□ 0.99
CDKN1A-206ENST00000462537 SP2Q02086 613 aa21.22■□□□□ 0.99
CDKN1A-206ENST00000462537 PKN1Q16512 942 aa21.22■□□□□ 0.99
CDKN1A-206ENST00000462537 NBPF20Q3BBV1 942 aa21.22■□□□□ 0.99
CDKN1A-206ENST00000462537 MYSM1Q5VVJ2 828 aa21.22■□□□□ 0.99
CDKN1A-206ENST00000462537 TRIM22Q8IYM9 498 aa21.22■□□□□ 0.99
CDKN1A-206ENST00000462537 PPTC7Q8NI37 304 aa21.22■□□□□ 0.99
CDKN1A-206ENST00000462537 ITGB8P26012 769 aa21.21■□□□□ 0.99
CDKN1A-206ENST00000462537 ICAM3P32942 547 aa21.21■□□□□ 0.99
CDKN1A-206ENST00000462537 SSRP1Q08945 709 aaKnown RBP21.21■□□□□ 0.99
CDKN1A-206ENST00000462537 CPLX2Q6PUV4 134 aaKnown RBP21.21■□□□□ 0.99
CDKN1A-206ENST00000462537 TDHQ8IZJ6 230 aa21.21■□□□□ 0.99
CDKN1A-206ENST00000462537 PPP1R13LQ8WUF5 828 aa21.21■□□□□ 0.99
CDKN1A-206ENST00000462537 TRPV6Q9H1D0 765 aa21.21■□□□□ 0.99
CDKN1A-206ENST00000462537 C6orf50Q9HD87 102 aa21.21■□□□□ 0.99
CDKN1A-206ENST00000462537 TMEM260Q9NX78 707 aa21.21■□□□□ 0.99
CDKN1A-206ENST00000462537 TBX21Q9UL17 535 aa21.21■□□□□ 0.99
CDKN1A-206ENST00000462537 DOCK5Q9H7D0 1870 aa21.21■□□□□ 0.99
CDKN1A-206ENST00000462537 SCN10AQ9Y5Y9 1956 aa21.21■□□□□ 0.99
CDKN1A-206ENST00000462537 SPATA31C2B4DYI2 1134 aa21.2■□□□□ 0.98
CDKN1A-206ENST00000462537 B4GALT4O60513 344 aa21.2■□□□□ 0.98
CDKN1A-206ENST00000462537 FOSP01100 380 aaPredicted RBP21.2■□□□□ 0.98
CDKN1A-206ENST00000462537 CD4P01730 458 aa21.2■□□□□ 0.98
CDKN1A-206ENST00000462537 ZNF286BP0CG31 522 aa21.2■□□□□ 0.98
CDKN1A-206ENST00000462537 NEDD9Q14511 834 aa21.2■□□□□ 0.98
CDKN1A-206ENST00000462537 ANKRD1Q15327 319 aa21.2■□□□□ 0.98
CDKN1A-206ENST00000462537 TEX2Q8IWB9 1127 aa21.2■□□□□ 0.98
CDKN1A-206ENST00000462537 ANO3Q9BYT9 981 aa21.2■□□□□ 0.98
CDKN1A-206ENST00000462537 PPP1R12CQ9BZL4 782 aa21.2■□□□□ 0.98
CDKN1A-206ENST00000462537 ALDH8A1Q9H2A2 487 aaPredicted RBP21.2■□□□□ 0.98
CDKN1A-206ENST00000462537 SLKQ9H2G2 1235 aaPredicted RBP21.2■□□□□ 0.98
CDKN1A-206ENST00000462537 NOP56O00567 594 aaKnown RBP21.19■□□□□ 0.98
CDKN1A-206ENST00000462537 TIMP1P01033 207 aa21.19■□□□□ 0.98
CDKN1A-206ENST00000462537 AK2P54819 239 aa21.19■□□□□ 0.98
CDKN1A-206ENST00000462537 SEMA3FQ13275 785 aa21.19■□□□□ 0.98
CDKN1A-206ENST00000462537 AP3B2Q13367 1082 aa21.19■□□□□ 0.98
CDKN1A-206ENST00000462537 HSDL1Q3SXM5 330 aa21.19■□□□□ 0.98
CDKN1A-206ENST00000462537 C8orf34Q49A92 452 aa21.19■□□□□ 0.98
CDKN1A-206ENST00000462537 JAKMIP3Q5VZ66 844 aa21.19■□□□□ 0.98
CDKN1A-206ENST00000462537 CYFIP1Q7L576 1253 aa21.19■□□□□ 0.98
CDKN1A-206ENST00000462537 CCDC148Q8NFR7 591 aa21.19■□□□□ 0.98
CDKN1A-206ENST00000462537 GPRASP2Q96D09 838 aa21.19■□□□□ 0.98
CDKN1A-206ENST00000462537 CDHR1Q96JP9 859 aa21.19■□□□□ 0.98
CDKN1A-206ENST00000462537 ESYT2A0FGR8 921 aa21.18■□□□□ 0.98
CDKN1A-206ENST00000462537 GNA11P29992 359 aa21.18■□□□□ 0.98
CDKN1A-206ENST00000462537 CLK2P49760 499 aaKnown RBP21.18■□□□□ 0.98
CDKN1A-206ENST00000462537 FXR1P51114 621 aaKnown RBP eCLIP21.18■□□□□ 0.98
CDKN1A-206ENST00000462537 FPGSQ05932 587 aa21.18■□□□□ 0.98
CDKN1A-206ENST00000462537 NFRKBQ6P4R8 1299 aa21.18■□□□□ 0.98
CDKN1A-206ENST00000462537 KATNAL1Q9BW62 490 aa21.18■□□□□ 0.98
CDKN1A-206ENST00000462537 ZMYND12Q9H0C1 365 aa21.18■□□□□ 0.98
CDKN1A-206ENST00000462537 BCAS3Q9H6U6 928 aa21.18■□□□□ 0.98
CDKN1A-206ENST00000462537 TRMT13Q9NUP7 481 aaKnown RBP21.18■□□□□ 0.98
CDKN1A-206ENST00000462537 PKD2L1Q9P0L9 805 aa21.18■□□□□ 0.98
CDKN1A-206ENST00000462537 VPS54Q9P1Q0 977 aa21.18■□□□□ 0.98
CDKN1A-206ENST00000462537 TPCN1Q9ULQ1 816 aa21.18■□□□□ 0.98
CDKN1A-206ENST00000462537 TRIOBPQ9H2D6 2365 aa21.18■□□□□ 0.98
CDKN1A-206ENST00000462537 PPFIA4O75335 1185 aa21.17■□□□□ 0.98
CDKN1A-206ENST00000462537 SUPT20HL2P0C7V6 817 aa21.17■□□□□ 0.98
CDKN1A-206ENST00000462537 ITGB5P18084 799 aa21.17■□□□□ 0.98
CDKN1A-206ENST00000462537 NEK4P51957 841 aa21.17■□□□□ 0.98
CDKN1A-206ENST00000462537 SP4Q02446 784 aa21.17■□□□□ 0.98
CDKN1A-206ENST00000462537 MTMR1Q13613 665 aa21.17■□□□□ 0.98
CDKN1A-206ENST00000462537 REXO1Q8N1G1 1221 aaKnown RBP21.17■□□□□ 0.98
CDKN1A-206ENST00000462537 GIMAP8Q8ND71 665 aaPredicted RBP21.17■□□□□ 0.98
CDKN1A-206ENST00000462537 KAT2BQ92831 832 aa21.17■□□□□ 0.98
CDKN1A-206ENST00000462537 IL17RAQ96F46 866 aa21.17■□□□□ 0.98
CDKN1A-206ENST00000462537 ALG1Q9BT22 464 aa21.17■□□□□ 0.98
CDKN1A-206ENST00000462537 HIPK3Q9H422 1215 aa21.17■□□□□ 0.98
CDKN1A-206ENST00000462537 NOD1Q9Y239 953 aa21.17■□□□□ 0.98
CDKN1A-206ENST00000462537 UBIAD1Q9Y5Z9 338 aa21.17■□□□□ 0.98
CDKN1A-206ENST00000462537 RANBP2P49792 3224 aaKnown RBP21.16■□□□□ 0.98
CDKN1A-206ENST00000462537 CDKL5O76039 1030 aa21.16■□□□□ 0.98
CDKN1A-206ENST00000462537 DEXIO95424 95 aa21.16■□□□□ 0.98
CDKN1A-206ENST00000462537 ZNF76P36508 570 aa21.16■□□□□ 0.98
CDKN1A-206ENST00000462537 PSEN2P49810 448 aa21.16■□□□□ 0.98
CDKN1A-206ENST00000462537 PTPN11Q06124 597 aaPredicted RBP21.16■□□□□ 0.98
CDKN1A-206ENST00000462537 SCRN1Q12765 414 aa21.16■□□□□ 0.98
CDKN1A-206ENST00000462537 MFSD10Q14728 455 aa21.16■□□□□ 0.98
CDKN1A-206ENST00000462537 METTL7BQ6UX53 244 aa21.16■□□□□ 0.98
CDKN1A-206ENST00000462537 BICD2Q8TD16 824 aa21.16■□□□□ 0.98
CDKN1A-206ENST00000462537 SENP7Q9BQF6 1050 aa21.16■□□□□ 0.98
CDKN1A-206ENST00000462537 JADE2Q9NQC1 790 aa21.16■□□□□ 0.98
CDKN1A-206ENST00000462537 PFKFB2O60825 505 aa21.15■□□□□ 0.98
CDKN1A-206ENST00000462537 HOXD8P13378 290 aaPredicted RBP21.15■□□□□ 0.98
CDKN1A-206ENST00000462537 CYP2C18P33260 490 aa21.15■□□□□ 0.98
CDKN1A-206ENST00000462537 SREBF1P36956 1147 aa21.15■□□□□ 0.98
CDKN1A-206ENST00000462537 KIAA0753Q2KHM9 967 aa21.15■□□□□ 0.98
CDKN1A-206ENST00000462537 MCTP2Q6DN12 878 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms