RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 SP4Q02446 784 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 MFSD10Q14728 455 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 PTGISQ16647 500 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 NBPF20Q3BBV1 942 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 LRIT3Q3SXY7 679 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 CELF3Q5SZQ8 465 aaKnown RBP10.23□□□□□ -0.77
DDX39B-216ENST00000462421 CCSAPQ6IQ19 270 aaPredicted RBP10.23□□□□□ -0.77
DDX39B-216ENST00000462421 METTL7BQ6UX53 244 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 FAM126BQ8IXS8 530 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 CAGE1Q8TC20 777 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 WASF1Q92558 559 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 COPS5Q92905 334 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 EMID1Q96A84 441 aaPredicted RBP10.23□□□□□ -0.77
DDX39B-216ENST00000462421 GPRASP2Q96D09 838 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 USP26Q9BXU7 913 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 ALDH8A1Q9H2A2 487 aaPredicted RBP10.23□□□□□ -0.77
DDX39B-216ENST00000462421 SLKQ9H2G2 1235 aaPredicted RBP10.23□□□□□ -0.77
DDX39B-216ENST00000462421 RIC8AQ9NPQ8 531 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 BARHL2Q9NY43 387 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 DDX41Q9UJV9 622 aaKnown RBP10.23□□□□□ -0.77
DDX39B-216ENST00000462421 PCDHA6Q9UN73 950 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 PCDHA8Q9Y5H6 950 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 FRMPD3Q5JV73 1810 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 ZNFX1Q9P2E3 1918 aaKnown RBP10.23□□□□□ -0.77
DDX39B-216ENST00000462421 BRCA2P51587 3418 aa10.22□□□□□ -0.77
DDX39B-216ENST00000462421 TRIM43BA6NCK2 446 aa10.22□□□□□ -0.77
DDX39B-216ENST00000462421 PARNO95453 639 aaKnown RBP10.22□□□□□ -0.77
DDX39B-216ENST00000462421 UBA1P22314 1058 aaKnown RBP10.22□□□□□ -0.77
DDX39B-216ENST00000462421 FXR1P51114 621 aaKnown RBP eCLIP10.22□□□□□ -0.77
DDX39B-216ENST00000462421 NLRP5P59047 1200 aa10.22□□□□□ -0.77
DDX39B-216ENST00000462421 ARHGAP1Q07960 439 aa10.22□□□□□ -0.77
DDX39B-216ENST00000462421 TRIM29Q14134 588 aa10.22□□□□□ -0.77
DDX39B-216ENST00000462421 UBE2SQ16763 222 aa10.22□□□□□ -0.77
DDX39B-216ENST00000462421 PFKFB3Q16875 520 aaPredicted RBP10.22□□□□□ -0.77
DDX39B-216ENST00000462421 KIAA0753Q2KHM9 967 aa10.22□□□□□ -0.77
DDX39B-216ENST00000462421 WWC2Q6AWC2 1192 aa10.22□□□□□ -0.77
DDX39B-216ENST00000462421 GPR153Q6NV75 609 aa10.22□□□□□ -0.77
DDX39B-216ENST00000462421 SH3RF1Q7Z6J0 888 aa10.22□□□□□ -0.77
DDX39B-216ENST00000462421 RSPH3Q86UC2 560 aa10.22□□□□□ -0.77
DDX39B-216ENST00000462421 REXO1Q8N1G1 1221 aaKnown RBP10.22□□□□□ -0.77
DDX39B-216ENST00000462421 GLG1Q92896 1179 aa10.22□□□□□ -0.77
DDX39B-216ENST00000462421 TRIM43Q96BQ3 446 aaPredicted RBP10.22□□□□□ -0.77
DDX39B-216ENST00000462421 RNF26Q9BY78 433 aaPredicted RBP10.22□□□□□ -0.77
DDX39B-216ENST00000462421 TM6SF1Q9BZW5 370 aa10.22□□□□□ -0.77
DDX39B-216ENST00000462421 FOXD4L1Q9NU39 408 aa10.22□□□□□ -0.77
DDX39B-216ENST00000462421 MSRAQ9UJ68 235 aa10.22□□□□□ -0.77
DDX39B-216ENST00000462421 CNTNAP5Q8WYK1 1306 aa10.22□□□□□ -0.77
DDX39B-216ENST00000462421 C17orf102A2RUQ5 167 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 MARCH6O60337 910 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 B4GALT4O60513 344 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 ARIH2O95376 493 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 DEXIO95424 95 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 FGBP02675 491 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 ZNF286BP0CG31 522 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 CPA1P15085 419 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 KCNJ6P48051 423 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 PSEN2P49810 448 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 CDK7P50613 346 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 CCT2P78371 535 aaKnown RBP10.21□□□□□ -0.77
DDX39B-216ENST00000462421 SETQ01105 290 aaPredicted RBP10.21□□□□□ -0.77
DDX39B-216ENST00000462421 STK3Q13188 491 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 UTP14CQ5TAP6 766 aaKnown RBP10.21□□□□□ -0.77
DDX39B-216ENST00000462421 CCDC62Q6P9F0 684 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 CYFIP1Q7L576 1253 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 KCNB2Q92953 911 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 SENP7Q9BQF6 1050 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 ANO3Q9BYT9 981 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 UPF3BQ9BZI7 483 aaKnown RBP10.21□□□□□ -0.77
DDX39B-216ENST00000462421 TRPV6Q9H1D0 765 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 ZSWIM6Q9HCJ5 1215 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 IL23AQ9NPF7 189 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 PKD2L1Q9P0L9 805 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 TBX21Q9UL17 535 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 BRPF3Q9ULD4 1205 aa10.21□□□□□ -0.77
DDX39B-216ENST00000462421 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.2□□□□□ -0.78
DDX39B-216ENST00000462421 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.2□□□□□ -0.78
DDX39B-216ENST00000462421 KIF28PB7ZC32 967 aa10.2□□□□□ -0.78
DDX39B-216ENST00000462421 M0QZ92 97 aa10.2□□□□□ -0.78
DDX39B-216ENST00000462421 PITPNM1O00562 1244 aa10.2□□□□□ -0.78
DDX39B-216ENST00000462421 MEIS2O14770 477 aa10.2□□□□□ -0.78
DDX39B-216ENST00000462421 OPLAHO14841 1288 aa10.2□□□□□ -0.78
DDX39B-216ENST00000462421 CTAGE5O15320 804 aa10.2□□□□□ -0.78
DDX39B-216ENST00000462421 PRPF3O43395 683 aaKnown RBP10.2□□□□□ -0.78
DDX39B-216ENST00000462421 RPLP2P05387 115 aaKnown RBP10.2□□□□□ -0.78
DDX39B-216ENST00000462421 ICAM3P32942 547 aa10.2□□□□□ -0.78
DDX39B-216ENST00000462421 CYP2C18P33260 490 aa10.2□□□□□ -0.78
DDX39B-216ENST00000462421 ADD1P35611 737 aaKnown RBP10.2□□□□□ -0.78
DDX39B-216ENST00000462421 CCL23P55773 120 aa10.2□□□□□ -0.78
DDX39B-216ENST00000462421 IRX5P78411 483 aaPredicted RBP10.2□□□□□ -0.78
DDX39B-216ENST00000462421 FRMPD4Q14CM0 1322 aa10.2□□□□□ -0.78
DDX39B-216ENST00000462421 RAB30Q15771 203 aa10.2□□□□□ -0.78
DDX39B-216ENST00000462421 MYSM1Q5VVJ2 828 aa10.2□□□□□ -0.78
DDX39B-216ENST00000462421 FAM160B1Q5W0V3 765 aa10.2□□□□□ -0.78
DDX39B-216ENST00000462421 FBXL16Q8N461 479 aa10.2□□□□□ -0.78
DDX39B-216ENST00000462421 DEFB123Q8N688 67 aa10.2□□□□□ -0.78
DDX39B-216ENST00000462421 SEPT1Q8WYJ6 367 aa10.2□□□□□ -0.78
DDX39B-216ENST00000462421 ZNF274Q96GC6 653 aaPredicted RBP10.2□□□□□ -0.78
DDX39B-216ENST00000462421 INPP4AQ96PE3 977 aaPredicted RBP10.2□□□□□ -0.78
DDX39B-216ENST00000462421 JPH1Q9HDC5 661 aaPredicted RBP10.2□□□□□ -0.78
DDX39B-216ENST00000462421 SH3GLB2Q9NR46 395 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms