RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 PGBD1Q96JS3 809 aa10.91□□□□□ -0.66
PKP4-208ENST00000462335 LLPHQ9BRT6 129 aaKnown RBP10.91□□□□□ -0.66
PKP4-208ENST00000462335 MTG1Q9BT17 334 aaPredicted RBP10.91□□□□□ -0.66
PKP4-208ENST00000462335 UPF3AQ9H1J1 476 aaKnown RBP10.91□□□□□ -0.66
PKP4-208ENST00000462335 PRDM5Q9NQX1 630 aaPredicted RBP10.91□□□□□ -0.66
PKP4-208ENST00000462335 TMEM260Q9NX78 707 aa10.91□□□□□ -0.66
PKP4-208ENST00000462335 PKD2L1Q9P0L9 805 aa10.91□□□□□ -0.66
PKP4-208ENST00000462335 DDX41Q9UJV9 622 aaKnown RBP10.91□□□□□ -0.66
PKP4-208ENST00000462335 GNEQ9Y223 722 aaKnown RBP10.91□□□□□ -0.66
PKP4-208ENST00000462335 NOD1Q9Y239 953 aa10.91□□□□□ -0.66
PKP4-208ENST00000462335 HTTP42858 3142 aa10.91□□□□□ -0.66
PKP4-208ENST00000462335 ELP1O95163 1332 aa10.9□□□□□ -0.66
PKP4-208ENST00000462335 A0A0U1RQG5 324 aaPredicted RBP10.9□□□□□ -0.66
PKP4-208ENST00000462335 A0A1W2PQ45 241 aaPredicted RBP10.9□□□□□ -0.66
PKP4-208ENST00000462335 A0A1W2PQY0 241 aa10.9□□□□□ -0.66
PKP4-208ENST00000462335 PQBP1O60828 265 aaKnown RBP10.9□□□□□ -0.66
PKP4-208ENST00000462335 CST5P28325 142 aaPredicted RBP10.9□□□□□ -0.66
PKP4-208ENST00000462335 RTP1P59025 263 aa10.9□□□□□ -0.66
PKP4-208ENST00000462335 ARHGAP4P98171 946 aa10.9□□□□□ -0.66
PKP4-208ENST00000462335 SP4Q02446 784 aa10.9□□□□□ -0.66
PKP4-208ENST00000462335 CELF3Q5SZQ8 465 aaKnown RBP10.9□□□□□ -0.66
PKP4-208ENST00000462335 COPS5Q92905 334 aa10.9□□□□□ -0.66
PKP4-208ENST00000462335 GPRASP2Q96D09 838 aa10.9□□□□□ -0.66
PKP4-208ENST00000462335 SEZ6LQ9BYH1 1024 aa10.9□□□□□ -0.66
PKP4-208ENST00000462335 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.9□□□□□ -0.66
PKP4-208ENST00000462335 MYADML2A6NDP7 307 aa10.89□□□□□ -0.67
PKP4-208ENST00000462335 SPATA31C2B4DYI2 1134 aa10.89□□□□□ -0.67
PKP4-208ENST00000462335 PPFIA4O75335 1185 aa10.89□□□□□ -0.67
PKP4-208ENST00000462335 HSP90AA1P07900 732 aaKnown RBP10.89□□□□□ -0.67
PKP4-208ENST00000462335 KRT2P35908 639 aa10.89□□□□□ -0.67
PKP4-208ENST00000462335 MRPS9P82933 396 aaKnown RBP10.89□□□□□ -0.67
PKP4-208ENST00000462335 ITGA7Q13683 1181 aa10.89□□□□□ -0.67
PKP4-208ENST00000462335 NONOQ15233 471 aaKnown RBP eCLIP10.89□□□□□ -0.672e-6■■■□□ 18.3
PKP4-208ENST00000462335 CEP55Q53EZ4 464 aa10.89□□□□□ -0.67
PKP4-208ENST00000462335 TYW1BQ6NUM6 668 aa10.89□□□□□ -0.67
PKP4-208ENST00000462335 CCDC62Q6P9F0 684 aa10.89□□□□□ -0.67
PKP4-208ENST00000462335 CYFIP1Q7L576 1253 aa10.89□□□□□ -0.67
PKP4-208ENST00000462335 KRT25Q7Z3Z0 450 aa10.89□□□□□ -0.67
PKP4-208ENST00000462335 PLA2G4DQ86XP0 818 aa10.89□□□□□ -0.67
PKP4-208ENST00000462335 C8orf76Q96K31 380 aa10.89□□□□□ -0.67
PKP4-208ENST00000462335 NAP1L4Q99733 375 aaKnown RBP10.89□□□□□ -0.67
PKP4-208ENST00000462335 MXRA8Q9BRK3 442 aa10.89□□□□□ -0.67
PKP4-208ENST00000462335 KATNAL1Q9BW62 490 aa10.89□□□□□ -0.67
PKP4-208ENST00000462335 JADE2Q9NQC1 790 aa10.89□□□□□ -0.67
PKP4-208ENST00000462335 TMEM39AQ9NV64 488 aa10.89□□□□□ -0.67
PKP4-208ENST00000462335 KCNJ14Q9UNX9 436 aa10.89□□□□□ -0.67
PKP4-208ENST00000462335 MYH7BA7E2Y1 1941 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 KIAA1217Q5T5P2 1943 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 A6NJR5 290 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 H3BQV1 296 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 ARVCFO00192 962 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 ADCY6O43306 1168 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 ARIH2O95376 493 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 LARGE1O95461 756 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 SUPT20HL2P0C7V6 817 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 COL6A1P12109 1028 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 ICAM3P32942 547 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 SREBF1P36956 1147 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 USP11P51784 963 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 SETQ01105 290 aaPredicted RBP10.88□□□□□ -0.67
PKP4-208ENST00000462335 LRRC26Q2I0M4 334 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 TRIM60Q495X7 471 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 PRR16Q569H4 304 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 TMEM63BQ5T3F8 832 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 UTP14CQ5TAP6 766 aaKnown RBP10.88□□□□□ -0.67
PKP4-208ENST00000462335 MYSM1Q5VVJ2 828 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 UBE2Q1Q7Z7E8 422 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 C7orf31Q8N865 590 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 NSUN7Q8NE18 718 aaKnown RBP10.88□□□□□ -0.67
PKP4-208ENST00000462335 PPTC7Q8NI37 304 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 RASGRP4Q8TDF6 673 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 GLG1Q92896 1179 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 TNPO1Q92973 898 aaKnown RBP10.88□□□□□ -0.67
PKP4-208ENST00000462335 AIFM3Q96NN9 605 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 INPP4AQ96PE3 977 aaPredicted RBP10.88□□□□□ -0.67
PKP4-208ENST00000462335 KIF2CQ99661 725 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 SENP7Q9BQF6 1050 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 AZI2Q9H6S1 392 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 ZNF215Q9UL58 517 aaPredicted RBP10.88□□□□□ -0.67
PKP4-208ENST00000462335 SMC3Q9UQE7 1217 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 LCTP09848 1927 aa10.88□□□□□ -0.67
PKP4-208ENST00000462335 FRMPD4Q14CM0 1322 aa10.87□□□□□ -0.67
PKP4-208ENST00000462335 FRMPD3Q5JV73 1810 aa10.87□□□□□ -0.67
PKP4-208ENST00000462335 H0YGN5 161 aa10.87□□□□□ -0.67
PKP4-208ENST00000462335 JAK2O60674 1132 aa10.87□□□□□ -0.67
PKP4-208ENST00000462335 BAG4O95429 457 aaKnown RBP10.87□□□□□ -0.67
PKP4-208ENST00000462335 MMP3P08254 477 aa10.87□□□□□ -0.67
PKP4-208ENST00000462335 RAG1P15918 1043 aa10.87□□□□□ -0.67
PKP4-208ENST00000462335 UBA1P22314 1058 aaKnown RBP10.87□□□□□ -0.67
PKP4-208ENST00000462335 CLK2P49760 499 aaKnown RBP10.87□□□□□ -0.67
PKP4-208ENST00000462335 IRX5P78411 483 aaPredicted RBP10.87□□□□□ -0.67
PKP4-208ENST00000462335 TLE2Q04725 743 aa10.87□□□□□ -0.67
PKP4-208ENST00000462335 ARHGAP1Q07960 439 aa10.87□□□□□ -0.67
PKP4-208ENST00000462335 METTL7BQ6UX53 244 aa10.87□□□□□ -0.67
PKP4-208ENST00000462335 NIPA1Q7RTP0 329 aa10.87□□□□□ -0.67
PKP4-208ENST00000462335 TBCKQ8TEA7 893 aa10.87□□□□□ -0.67
PKP4-208ENST00000462335 EMID1Q96A84 441 aaPredicted RBP10.87□□□□□ -0.67
PKP4-208ENST00000462335 ZNF577Q9BSK1 485 aa10.87□□□□□ -0.67
PKP4-208ENST00000462335 JPH1Q9HDC5 661 aaPredicted RBP10.87□□□□□ -0.67
PKP4-208ENST00000462335 KCNH7Q9NS40 1196 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms