RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 EMID1Q96A84 441 aaPredicted RBP17.97■□□□□ 0.47
APP-211ENST00000462267 ECHDC1Q9NTX5 307 aa17.97■□□□□ 0.47
APP-211ENST00000462267 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.97■□□□□ 0.47
APP-211ENST00000462267 WDR19Q8NEZ3 1342 aa17.97■□□□□ 0.47
APP-211ENST00000462267 HYAL1Q12794 435 aa17.96■□□□□ 0.47
APP-211ENST00000462267 SEPT8Q92599 483 aa17.96■□□□□ 0.47
APP-211ENST00000462267 C11orf84Q9BUA3 381 aaPredicted RBP17.96■□□□□ 0.47
APP-211ENST00000462267 MAF1Q9H063 256 aa17.96■□□□□ 0.47
APP-211ENST00000462267 CD207Q9UJ71 328 aa17.96■□□□□ 0.47
APP-211ENST00000462267 C5orf67F2Z3F1 127 aa17.95■□□□□ 0.46
APP-211ENST00000462267 UPP2O95045 317 aa17.95■□□□□ 0.46
APP-211ENST00000462267 THPOP40225 353 aa17.95■□□□□ 0.46
APP-211ENST00000462267 ZXDAP98168 799 aa17.95■□□□□ 0.46
APP-211ENST00000462267 ZNF200P98182 395 aaPredicted RBP17.95■□□□□ 0.46
APP-211ENST00000462267 SERINC5Q86VE9 423 aa17.95■□□□□ 0.46
APP-211ENST00000462267 DHX37Q8IY37 1157 aaKnown RBP17.95■□□□□ 0.46
APP-211ENST00000462267 LRRCC1Q9C099 1032 aa17.95■□□□□ 0.46
APP-211ENST00000462267 TBX10O75333 385 aa17.94■□□□□ 0.46
APP-211ENST00000462267 LAMC2Q13753 1193 aa17.94■□□□□ 0.46
APP-211ENST00000462267 FIBCD1Q8N539 461 aa17.94■□□□□ 0.46
APP-211ENST00000462267 PPTC7Q8NI37 304 aa17.94■□□□□ 0.46
APP-211ENST00000462267 IFIH1Q9BYX4 1025 aaKnown RBP17.94■□□□□ 0.46
APP-211ENST00000462267 ALG13Q9NP73 1137 aaKnown RBP17.94■□□□□ 0.46
APP-211ENST00000462267 GPCPD1Q9NPB8 672 aa17.94■□□□□ 0.46
APP-211ENST00000462267 FAM86C1Q9NVL1 165 aa17.94■□□□□ 0.46
APP-211ENST00000462267 DDX41Q9UJV9 622 aaKnown RBP17.94■□□□□ 0.46
APP-211ENST00000462267 RWDD3Q9Y3V2 267 aa17.94■□□□□ 0.46
APP-211ENST00000462267 RANBP6O60518 1105 aaKnown RBP17.93■□□□□ 0.46
APP-211ENST00000462267 EYA4O95677 639 aa17.93■□□□□ 0.46
APP-211ENST00000462267 ZNF286BP0CG31 522 aa17.93■□□□□ 0.46
APP-211ENST00000462267 TOP1P11387 765 aaKnown RBP17.93■□□□□ 0.46
APP-211ENST00000462267 CTNNB1P35222 781 aa17.93■□□□□ 0.46
APP-211ENST00000462267 STXBP2Q15833 593 aa17.93■□□□□ 0.46
APP-211ENST00000462267 NSUN6Q8TEA1 469 aaKnown RBP17.93■□□□□ 0.46
APP-211ENST00000462267 ATOH1Q92858 354 aaPredicted RBP17.93■□□□□ 0.46
APP-211ENST00000462267 IL17RAQ96F46 866 aa17.93■□□□□ 0.46
APP-211ENST00000462267 IWS1Q96ST2 819 aa17.93■□□□□ 0.46
APP-211ENST00000462267 ZBTB40Q9NUA8 1239 aa17.93■□□□□ 0.46
APP-211ENST00000462267 FRMPD2Q68DX3 1309 aaPredicted RBP17.93■□□□□ 0.46
APP-211ENST00000462267 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.92■□□□□ 0.46
APP-211ENST00000462267 LOC730098B7Z3J9 87 aa17.92■□□□□ 0.46
APP-211ENST00000462267 RBAK-RBAKDNI3L0D1 243 aa17.92■□□□□ 0.46
APP-211ENST00000462267 GRM6O15303 877 aa17.92■□□□□ 0.46
APP-211ENST00000462267 PPFIA4O75335 1185 aa17.92■□□□□ 0.46
APP-211ENST00000462267 MS4A1P11836 297 aa17.92■□□□□ 0.46
APP-211ENST00000462267 HOXD8P13378 290 aaPredicted RBP17.92■□□□□ 0.46
APP-211ENST00000462267 BMPR1AP36894 532 aa17.92■□□□□ 0.46
APP-211ENST00000462267 ADAM15Q13444 863 aa17.92■□□□□ 0.46
APP-211ENST00000462267 RALGAPA2Q2PPJ7 1873 aa17.91■□□□□ 0.46
APP-211ENST00000462267 SIGLEC14Q08ET2 396 aa17.91■□□□□ 0.46
APP-211ENST00000462267 HIC1Q14526 733 aa17.91■□□□□ 0.46
APP-211ENST00000462267 CBX2Q14781 532 aaPredicted RBP17.91■□□□□ 0.46
APP-211ENST00000462267 APBB2Q92870 758 aa17.91■□□□□ 0.46
APP-211ENST00000462267 GPATCH3Q96I76 525 aa17.91■□□□□ 0.46
APP-211ENST00000462267 TAAR1Q96RJ0 339 aa17.91■□□□□ 0.46
APP-211ENST00000462267 TMEM47Q9BQJ4 181 aa17.91■□□□□ 0.46
APP-211ENST00000462267 IGFLR1Q9H665 355 aa17.91■□□□□ 0.46
APP-211ENST00000462267 INCENPQ9NQS7 918 aa17.91■□□□□ 0.46
APP-211ENST00000462267 RIF1Q5UIP0 2472 aaKnown RBP17.91■□□□□ 0.46
APP-211ENST00000462267 NLRC5Q86WI3 1866 aa17.9■□□□□ 0.46
APP-211ENST00000462267 PROB1E7EW31 1015 aa17.9■□□□□ 0.46
APP-211ENST00000462267 ORC4O43929 436 aa17.9■□□□□ 0.46
APP-211ENST00000462267 SMARCA5O60264 1052 aaPredicted RBP17.9■□□□□ 0.46
APP-211ENST00000462267 CAND2O75155 1236 aa17.9■□□□□ 0.46
APP-211ENST00000462267 EIF3JO75822 258 aaKnown RBP17.9■□□□□ 0.46
APP-211ENST00000462267 PDHBP11177 359 aa17.9■□□□□ 0.46
APP-211ENST00000462267 AVPR2P30518 371 aa17.9■□□□□ 0.46
APP-211ENST00000462267 NDUFV1P49821 464 aa17.9■□□□□ 0.46
APP-211ENST00000462267 NUBP1P53384 320 aa17.9■□□□□ 0.46
APP-211ENST00000462267 CTDSPL2Q05D32 466 aa17.9■□□□□ 0.46
APP-211ENST00000462267 ERMP1Q7Z2K6 904 aa17.9■□□□□ 0.46
APP-211ENST00000462267 SYTL5Q8TDW5 730 aaPredicted RBP17.9■□□□□ 0.46
APP-211ENST00000462267 PPP2R3CQ969Q6 453 aa17.9■□□□□ 0.46
APP-211ENST00000462267 MSLNLQ96KJ4 702 aa17.9■□□□□ 0.46
APP-211ENST00000462267 RMDN3Q96TC7 470 aa17.9■□□□□ 0.46
APP-211ENST00000462267 SEC62Q99442 399 aaKnown RBP17.9■□□□□ 0.46
APP-211ENST00000462267 DDX19BQ9UMR2 479 aa17.9■□□□□ 0.46
APP-211ENST00000462267 MRVI1Q9Y6F6 885 aa17.9■□□□□ 0.46
APP-211ENST00000462267 LINC01565O15544 149 aa17.89■□□□□ 0.45
APP-211ENST00000462267 MMP1P03956 469 aa17.89■□□□□ 0.45
APP-211ENST00000462267 LINC00271P0C7V0 271 aa17.89■□□□□ 0.45
APP-211ENST00000462267 GTF2F1P35269 517 aaKnown RBP eCLIP17.89■□□□□ 0.45
APP-211ENST00000462267 VCPP55072 806 aaKnown RBP17.89■□□□□ 0.45
APP-211ENST00000462267 ZNF543Q08ER8 600 aa17.89■□□□□ 0.45
APP-211ENST00000462267 USH1GQ495M9 461 aa17.89■□□□□ 0.45
APP-211ENST00000462267 CLP1Q92989 425 aaKnown RBP17.89■□□□□ 0.45
APP-211ENST00000462267 ATP6V0A1Q93050 837 aa17.89■□□□□ 0.45
APP-211ENST00000462267 ANAPC4Q9UJX5 808 aa17.89■□□□□ 0.45
APP-211ENST00000462267 KMT2EQ8IZD2 1858 aa17.88■□□□□ 0.45
APP-211ENST00000462267 C17orf102A2RUQ5 167 aa17.88■□□□□ 0.45
APP-211ENST00000462267 COASYQ13057 564 aa17.88■□□□□ 0.45
APP-211ENST00000462267 SMRP1Q8NCR6 262 aa17.88■□□□□ 0.45
APP-211ENST00000462267 PLVAPQ9BX97 442 aa17.88■□□□□ 0.45
APP-211ENST00000462267 TCP11L1Q9NUJ3 509 aa17.88■□□□□ 0.45
APP-211ENST00000462267 FGRP09769 529 aa17.87■□□□□ 0.45
APP-211ENST00000462267 HOXC8P31273 242 aa17.87■□□□□ 0.45
APP-211ENST00000462267 MYSM1Q5VVJ2 828 aa17.87■□□□□ 0.45
APP-211ENST00000462267 MCF2L2Q86YR7 1114 aa17.87■□□□□ 0.45
APP-211ENST00000462267 TBC1D5Q92609 795 aa17.87■□□□□ 0.45
APP-211ENST00000462267 ASIC4Q96FT7 647 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms