RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 SMARCC2Q8TAQ2 1214 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 MYLIPQ8WY64 445 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 CUL5Q93034 780 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 CCDC136Q96JN2 1154 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 SPATA33Q96N06 139 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 CTAGE1Q96RT6 745 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 KATNAL1Q9BW62 490 aa21.85■■□□□ 1.09
VARS-220ENST00000461874 HAS3O00219 553 aa21.84■■□□□ 1.09
VARS-220ENST00000461874 SORBS3O60504 671 aa21.84■■□□□ 1.09
VARS-220ENST00000461874 IQCF3P0C7M6 154 aa21.84■■□□□ 1.09
VARS-220ENST00000461874 ZNF286BP0CG31 522 aa21.84■■□□□ 1.09
VARS-220ENST00000461874 ICAM3P32942 547 aa21.84■■□□□ 1.09
VARS-220ENST00000461874 RFC2P35250 354 aa21.84■■□□□ 1.09
VARS-220ENST00000461874 MFSD10Q14728 455 aa21.84■■□□□ 1.09
VARS-220ENST00000461874 GNPTABQ3T906 1256 aa21.84■■□□□ 1.09
VARS-220ENST00000461874 DHX32Q7L7V1 743 aaKnown RBP21.84■■□□□ 1.09
VARS-220ENST00000461874 MICU3Q86XE3 530 aa21.84■■□□□ 1.09
VARS-220ENST00000461874 INPP4AQ96PE3 977 aaPredicted RBP21.84■■□□□ 1.09
VARS-220ENST00000461874 ZNF576Q9H609 170 aa21.84■■□□□ 1.09
VARS-220ENST00000461874 HDAC6Q9UBN7 1215 aa21.84■■□□□ 1.09
VARS-220ENST00000461874 GRIN2CQ14957 1233 aa21.83■■□□□ 1.09
VARS-220ENST00000461874 KIAA0753Q2KHM9 967 aa21.83■■□□□ 1.09
VARS-220ENST00000461874 ADCK5Q3MIX3 580 aa21.83■■□□□ 1.09
VARS-220ENST00000461874 SYNE3Q6ZMZ3 975 aa21.83■■□□□ 1.09
VARS-220ENST00000461874 DEFB128Q7Z7B8 93 aa21.83■■□□□ 1.09
VARS-220ENST00000461874 CCDC82Q8N4S0 544 aa21.83■■□□□ 1.09
VARS-220ENST00000461874 C7orf31Q8N865 590 aa21.83■■□□□ 1.09
VARS-220ENST00000461874 ALG1Q9BT22 464 aa21.83■■□□□ 1.09
VARS-220ENST00000461874 PSTPIP2Q9H939 334 aa21.83■■□□□ 1.09
VARS-220ENST00000461874 MLXIPQ9HAP2 919 aa21.83■■□□□ 1.09
VARS-220ENST00000461874 GTF2IRD1Q9UHL9 959 aa21.83■■□□□ 1.09
VARS-220ENST00000461874 hCG_1642624A0A1W2PR95 340 aa21.82■■□□□ 1.08
VARS-220ENST00000461874 SPATA31C2B4DYI2 1134 aa21.82■■□□□ 1.08
VARS-220ENST00000461874 KRT32Q14532 448 aa21.82■■□□□ 1.08
VARS-220ENST00000461874 RAB30Q15771 203 aa21.82■■□□□ 1.08
VARS-220ENST00000461874 PCNX4Q63HM2 1172 aa21.82■■□□□ 1.08
VARS-220ENST00000461874 XRRA1Q6P2D8 792 aa21.82■■□□□ 1.08
VARS-220ENST00000461874 APOA5Q6Q788 366 aa21.82■■□□□ 1.08
VARS-220ENST00000461874 CCDC155Q8N6L0 562 aa21.82■■□□□ 1.08
VARS-220ENST00000461874 CAGE1Q8TC20 777 aa21.82■■□□□ 1.08
VARS-220ENST00000461874 TCEANC2Q96MN5 208 aa21.82■■□□□ 1.08
VARS-220ENST00000461874 BCAS3Q9H6U6 928 aa21.82■■□□□ 1.08
VARS-220ENST00000461874 RTEL1Q9NZ71 1219 aa21.82■■□□□ 1.08
VARS-220ENST00000461874 MSRAQ9UJ68 235 aa21.82■■□□□ 1.08
VARS-220ENST00000461874 SLC4A7Q9Y6M7 1214 aa21.82■■□□□ 1.08
VARS-220ENST00000461874 SEMA3FQ13275 785 aa21.81■■□□□ 1.08
VARS-220ENST00000461874 DHX38Q92620 1227 aaKnown RBP21.81■■□□□ 1.08
VARS-220ENST00000461874 C16orf70Q9BSU1 422 aa21.81■■□□□ 1.08
VARS-220ENST00000461874 BRPF3Q9ULD4 1205 aa21.81■■□□□ 1.08
VARS-220ENST00000461874 ZBBXA8MT70 800 aa21.8■■□□□ 1.08
VARS-220ENST00000461874 FIBPO43427 364 aa21.8■■□□□ 1.08
VARS-220ENST00000461874 FOSL2P15408 326 aa21.8■■□□□ 1.08
VARS-220ENST00000461874 NEDD9Q14511 834 aa21.8■■□□□ 1.08
VARS-220ENST00000461874 AFAP1L1Q8TED9 768 aa21.8■■□□□ 1.08
VARS-220ENST00000461874 RBM28Q9NW13 759 aaKnown RBP21.8■■□□□ 1.08
VARS-220ENST00000461874 HMGB1P09429 215 aaKnown RBP21.79■■□□□ 1.08
VARS-220ENST00000461874 ACTN1P12814 892 aa21.79■■□□□ 1.08
VARS-220ENST00000461874 RBL2Q08999 1139 aa21.79■■□□□ 1.08
VARS-220ENST00000461874 METTL7BQ6UX53 244 aa21.79■■□□□ 1.08
VARS-220ENST00000461874 MAFAQ8NHW3 353 aaPredicted RBP21.79■■□□□ 1.08
VARS-220ENST00000461874 KCNB2Q92953 911 aa21.79■■□□□ 1.08
VARS-220ENST00000461874 ZBTB43O43298 467 aa21.78■■□□□ 1.08
VARS-220ENST00000461874 SELPP16109 830 aa21.78■■□□□ 1.08
VARS-220ENST00000461874 ATP2A2P16615 1042 aaKnown RBP21.78■■□□□ 1.08
VARS-220ENST00000461874 FUT2Q10981 343 aa21.78■■□□□ 1.08
VARS-220ENST00000461874 PTK7Q13308 1070 aa21.78■■□□□ 1.08
VARS-220ENST00000461874 RTN1Q16799 776 aa21.78■■□□□ 1.08
VARS-220ENST00000461874 CYFIP1Q7L576 1253 aa21.78■■□□□ 1.08
VARS-220ENST00000461874 HEATR3Q7Z4Q2 680 aa21.78■■□□□ 1.08
VARS-220ENST00000461874 SENP7Q9BQF6 1050 aa21.78■■□□□ 1.08
VARS-220ENST00000461874 FTOQ9C0B1 505 aaKnown RBP eCLIP21.78■■□□□ 1.08
VARS-220ENST00000461874 YBX2Q9Y2T7 364 aaKnown RBP21.78■■□□□ 1.08
VARS-220ENST00000461874 MYH7BA7E2Y1 1941 aa21.78■■□□□ 1.08
VARS-220ENST00000461874 CNTNAP5Q8WYK1 1306 aa21.78■■□□□ 1.08
VARS-220ENST00000461874 NOP56O00567 594 aaKnown RBP21.77■■□□□ 1.08
VARS-220ENST00000461874 LGALS2P05162 132 aa21.77■■□□□ 1.08
VARS-220ENST00000461874 RABGGTBP53611 331 aa21.77■■□□□ 1.08
VARS-220ENST00000461874 ZNF200P98182 395 aaPredicted RBP21.77■■□□□ 1.08
VARS-220ENST00000461874 HIC1Q14526 733 aa21.77■■□□□ 1.08
VARS-220ENST00000461874 GPNMBQ14956 572 aa21.77■■□□□ 1.08
VARS-220ENST00000461874 UBE2SQ16763 222 aa21.77■■□□□ 1.08
VARS-220ENST00000461874 LRRC8DQ7L1W4 858 aa21.77■■□□□ 1.08
VARS-220ENST00000461874 NLRX1Q86UT6 975 aa21.77■■□□□ 1.08
VARS-220ENST00000461874 GPR20Q99678 358 aa21.77■■□□□ 1.08
VARS-220ENST00000461874 USP26Q9BXU7 913 aa21.77■■□□□ 1.08
VARS-220ENST00000461874 NKX2-4Q9H2Z4 354 aa21.77■■□□□ 1.08
VARS-220ENST00000461874 H3BRB1 525 aa21.76■■□□□ 1.07
VARS-220ENST00000461874 CKBP12277 381 aa21.76■■□□□ 1.07
VARS-220ENST00000461874 TRIM71Q2Q1W2 868 aaKnown RBP21.76■■□□□ 1.07
VARS-220ENST00000461874 WWC2Q6AWC2 1192 aa21.76■■□□□ 1.07
VARS-220ENST00000461874 TUT1Q9H6E5 874 aaKnown RBP21.76■■□□□ 1.07
VARS-220ENST00000461874 SLC28A3Q9HAS3 691 aa21.76■■□□□ 1.07
VARS-220ENST00000461874 FAM217BQ9NTX9 383 aaPredicted RBP21.76■■□□□ 1.07
VARS-220ENST00000461874 PCDHA11Q9Y5I1 949 aa21.76■■□□□ 1.07
VARS-220ENST00000461874 CHD9Q3L8U1 2897 aa21.76■■□□□ 1.07
VARS-220ENST00000461874 SCN5AQ14524 2016 aa21.75■■□□□ 1.07
VARS-220ENST00000461874 EYSQ5T1H1 3165 aa21.75■■□□□ 1.07
VARS-220ENST00000461874 UNC80Q8N2C7 3258 aa21.75■■□□□ 1.07
VARS-220ENST00000461874 KLF18A0A0U1RQI7 1052 aa21.75■■□□□ 1.07
VARS-220ENST00000461874 SPDYE3A6NKU9 549 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms