RNA–Protein interactions for RNA: ENST00000461710.5

CDK5RAP1-207, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 2

Gene CDK5RAP1, Length 2,650 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-207ENST00000461710 KLRC1P26715 233 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 PRDX5P30044 214 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 NEK8Q86SG6 692 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 SYN2Q92777 582 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 VCPKMTQ9H867 229 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 NLRC4Q9NPP4 1024 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 A1CFQ9NQ94 594 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 BSDC1Q9NW68 430 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 CEP72Q9P209 647 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 MINPP1Q9UNW1 487 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 PLAAQ9Y263 795 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 MAST2Q6P0Q8 1798 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 CCDC88AQ3V6T2 1871 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 USP17L3A6NCW0 530 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 USP17L4A6NCW7 530 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 RAD51CO43502 376 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 SERPING1P05155 500 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 KLRK1P26718 216 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 C6orf89Q6UWU4 347 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 C3orf67Q6ZVT6 689 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 DYMQ7RTS9 669 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 USP17L1Q7RTZ2 530 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 TMBIM4Q9HC24 238 aa12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 PACSIN2Q9UNF0 486 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP1-207ENST00000461710 MAP2K2P36507 400 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 NAPAP54920 295 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 ACTN3Q08043 901 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 CEP85LQ5SZL2 805 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 C12orf60Q5U649 245 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 SFMBT2Q5VUG0 894 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 PPP4R3AQ6IN85 833 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 USP38Q8NB14 1042 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 LARP4BQ92615 738 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 DYNLL2Q96FJ2 89 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 PNMA5Q96PV4 448 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 NUCKS1Q9H1E3 243 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 PLCB1Q9NQ66 1216 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 STK17AQ9UEE5 414 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 TMEM59LQ9UK28 342 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 XIRP1Q702N8 1843 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 ECHS1P30084 290 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 CRKLP46109 303 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 SETQ01105 290 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 EHHADHQ08426 723 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 PLCB4Q15147 1175 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 FAM83BQ5T0W9 1011 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 MAATS1Q7Z4T9 603 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 GLIS3Q8NEA6 775 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 TANGO6Q9C0B7 1094 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 TAF1DQ9H5J8 278 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 CXorf56Q9H5V9 222 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 MTMR7Q9Y216 660 aa12.67□□□□□ -0.38
CDK5RAP1-207ENST00000461710 SMCO2A6NFE2 343 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 E7EVH7 732 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 GOLGA8HP0CJ92 632 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 NT5C2P49902 561 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 RNASE9P60153 205 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 SLC18A3Q16572 532 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 RNF187Q5TA31 235 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 FOXR2Q6PJQ5 311 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 LRIG3Q6UXM1 1119 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 CCDC13Q8IYE1 715 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 EIF1ADQ8N9N8 165 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 TBCKQ8TEA7 893 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 ISCUQ9H1K1 167 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 CPVLQ9H3G5 476 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 LUC7LQ9NQ29 371 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 ATP6V0A2Q9Y487 856 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 TXKP42681 527 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 SMTNP53814 917 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 ERVK-9P63128 1117 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 TNNC1P63316 161 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 IFT88Q13099 833 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 ZCWPW2Q504Y3 356 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 PROM2Q8N271 834 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 CYFIP2Q96F07 1278 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 MTMR9Q96QG7 549 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 TMEM47Q9BQJ4 181 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 JPH2Q9BR39 696 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 SPZ1Q9BXG8 430 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 RIC8AQ9NPQ8 531 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 MYH4Q9Y623 1939 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 ROBO3Q96MS0 1386 aa12.66□□□□□ -0.38
CDK5RAP1-207ENST00000461710 A0A087X0T9 212 aa12.65□□□□□ -0.38
CDK5RAP1-207ENST00000461710 KLRF2D3W0D1 207 aa12.65□□□□□ -0.38
CDK5RAP1-207ENST00000461710 H0YGN5 161 aa12.65□□□□□ -0.38
CDK5RAP1-207ENST00000461710 RASSF9O75901 435 aa12.65□□□□□ -0.38
CDK5RAP1-207ENST00000461710 FAM228BP0C875 321 aa12.65□□□□□ -0.38
CDK5RAP1-207ENST00000461710 HPDP32754 393 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP1-207ENST00000461710 HSD17B3P37058 310 aa12.65□□□□□ -0.38
CDK5RAP1-207ENST00000461710 LRRC41Q15345 812 aa12.65□□□□□ -0.38
CDK5RAP1-207ENST00000461710 CCDC40Q4G0X9 1142 aa12.65□□□□□ -0.38
CDK5RAP1-207ENST00000461710 KLHL7Q8IXQ5 586 aa12.65□□□□□ -0.38
CDK5RAP1-207ENST00000461710 TBC1D5Q92609 795 aa12.65□□□□□ -0.38
CDK5RAP1-207ENST00000461710 TSG101Q99816 390 aa12.65□□□□□ -0.38
CDK5RAP1-207ENST00000461710 LZTS2Q9BRK4 669 aa12.65□□□□□ -0.38
CDK5RAP1-207ENST00000461710 PACSIN1Q9BY11 444 aa12.65□□□□□ -0.38
CDK5RAP1-207ENST00000461710 C6orf50Q9HD87 102 aa12.65□□□□□ -0.38
CDK5RAP1-207ENST00000461710 SLC12A6Q9UHW9 1150 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms