RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 TAL1P17542 331 aaPredicted RBP17.21■□□□□ 0.35
TMEM39A-203ENST00000461654 HOXA13P31271 388 aaPredicted RBP17.21■□□□□ 0.35
TMEM39A-203ENST00000461654 USP11P51784 963 aa17.21■□□□□ 0.35
TMEM39A-203ENST00000461654 CCDC73Q6ZRK6 1079 aa17.21■□□□□ 0.35
TMEM39A-203ENST00000461654 FCHSD1Q86WN1 690 aa17.21■□□□□ 0.35
TMEM39A-203ENST00000461654 CHST13Q8NET6 341 aa17.21■□□□□ 0.35
TMEM39A-203ENST00000461654 FERMT2Q96AC1 680 aa17.21■□□□□ 0.35
TMEM39A-203ENST00000461654 PGBD1Q96JS3 809 aa17.21■□□□□ 0.35
TMEM39A-203ENST00000461654 TINF2Q9BSI4 451 aa17.21■□□□□ 0.35
TMEM39A-203ENST00000461654 FBXO40Q9UH90 709 aa17.21■□□□□ 0.35
TMEM39A-203ENST00000461654 PFASO15067 1338 aa17.21■□□□□ 0.34
TMEM39A-203ENST00000461654 A0A1W2PQ27 194 aa17.2■□□□□ 0.34
TMEM39A-203ENST00000461654 A0A1W2PQ64 194 aa17.2■□□□□ 0.34
TMEM39A-203ENST00000461654 A0A1W2PQD8 194 aa17.2■□□□□ 0.34
TMEM39A-203ENST00000461654 DNM1LO00429 736 aa17.2■□□□□ 0.34
TMEM39A-203ENST00000461654 ATP2C1P98194 919 aaPredicted RBP17.2■□□□□ 0.34
TMEM39A-203ENST00000461654 PTGDRQ13258 359 aa17.2■□□□□ 0.34
TMEM39A-203ENST00000461654 MAMDC4Q6UXC1 1216 aa17.2■□□□□ 0.34
TMEM39A-203ENST00000461654 ZNF467Q7Z7K2 595 aaPredicted RBP17.2■□□□□ 0.34
TMEM39A-203ENST00000461654 ARRDC4Q8NCT1 418 aa17.2■□□□□ 0.34
TMEM39A-203ENST00000461654 CLEC4DQ8WXI8 215 aa17.2■□□□□ 0.34
TMEM39A-203ENST00000461654 ACAD9Q9H845 621 aa17.2■□□□□ 0.34
TMEM39A-203ENST00000461654 NFIBO00712 420 aa17.19■□□□□ 0.34
TMEM39A-203ENST00000461654 MARCH6O60337 910 aa17.19■□□□□ 0.34
TMEM39A-203ENST00000461654 NEMFO60524 1076 aa17.19■□□□□ 0.34
TMEM39A-203ENST00000461654 HSD17B4P51659 736 aa17.19■□□□□ 0.34
TMEM39A-203ENST00000461654 ARHGAP4P98171 946 aa17.19■□□□□ 0.34
TMEM39A-203ENST00000461654 GHRHRQ02643 423 aa17.19■□□□□ 0.34
TMEM39A-203ENST00000461654 PRAMEF19Q5SWL8 479 aa17.19■□□□□ 0.34
TMEM39A-203ENST00000461654 ARL6IP4Q66PJ3 421 aaKnown RBP17.19■□□□□ 0.34
TMEM39A-203ENST00000461654 CHRDL2Q6WN34 429 aa17.19■□□□□ 0.34
TMEM39A-203ENST00000461654 NSMFQ6X4W1 530 aa17.19■□□□□ 0.34
TMEM39A-203ENST00000461654 RNF207Q6ZRF8 634 aa17.19■□□□□ 0.34
TMEM39A-203ENST00000461654 GPT2Q8TD30 523 aa17.19■□□□□ 0.34
TMEM39A-203ENST00000461654 MRPS27Q92552 414 aaKnown RBP17.19■□□□□ 0.34
TMEM39A-203ENST00000461654 SRPRBQ9Y5M8 271 aaKnown RBP17.19■□□□□ 0.34
TMEM39A-203ENST00000461654 ZNFX1Q9P2E3 1918 aaKnown RBP17.18■□□□□ 0.34
TMEM39A-203ENST00000461654 ZNF76P36508 570 aa17.18■□□□□ 0.34
TMEM39A-203ENST00000461654 SREBF1P36956 1147 aa17.18■□□□□ 0.34
TMEM39A-203ENST00000461654 MUM1L1Q5H9M0 696 aa17.18■□□□□ 0.34
TMEM39A-203ENST00000461654 PPP4R3AQ6IN85 833 aa17.18■□□□□ 0.34
TMEM39A-203ENST00000461654 MOXD1Q6UVY6 613 aa17.18■□□□□ 0.34
TMEM39A-203ENST00000461654 FSIP1Q8NA03 581 aa17.18■□□□□ 0.34
TMEM39A-203ENST00000461654 TBC1D5Q92609 795 aa17.18■□□□□ 0.34
TMEM39A-203ENST00000461654 FAM13BQ9NYF5 915 aa17.18■□□□□ 0.34
TMEM39A-203ENST00000461654 FBXO2Q9UK22 296 aaPredicted RBP17.18■□□□□ 0.34
TMEM39A-203ENST00000461654 SYNGAP1Q96PV0 1343 aa17.18■□□□□ 0.34
TMEM39A-203ENST00000461654 A0A1W2PPC1 479 aa17.17■□□□□ 0.34
TMEM39A-203ENST00000461654 OR52Z1P0C646 297 aa17.17■□□□□ 0.34
TMEM39A-203ENST00000461654 ZNF865P0CJ78 1059 aaPredicted RBP17.17■□□□□ 0.34
TMEM39A-203ENST00000461654 CMA1P23946 247 aa17.17■□□□□ 0.34
TMEM39A-203ENST00000461654 PRPHP41219 470 aa17.17■□□□□ 0.34
TMEM39A-203ENST00000461654 DTHD1Q6ZMT9 781 aa17.17■□□□□ 0.34
TMEM39A-203ENST00000461654 ANKRD35Q8N283 1001 aa17.17■□□□□ 0.34
TMEM39A-203ENST00000461654 ZNF579Q8NAF0 562 aaKnown RBP17.17■□□□□ 0.34
TMEM39A-203ENST00000461654 DDX25Q9UHL0 483 aaKnown RBP17.17■□□□□ 0.34
TMEM39A-203ENST00000461654 TCHHQ07283 1943 aa17.16■□□□□ 0.34
TMEM39A-203ENST00000461654 WNT7AO00755 349 aa17.16■□□□□ 0.34
TMEM39A-203ENST00000461654 BMP8BP34820 402 aa17.16■□□□□ 0.34
TMEM39A-203ENST00000461654 FXR1P51114 621 aaKnown RBP eCLIP17.16■□□□□ 0.34
TMEM39A-203ENST00000461654 RPS6P62753 249 aaKnown RBP17.16■□□□□ 0.34
TMEM39A-203ENST00000461654 CALCRLQ16602 461 aa17.16■□□□□ 0.34
TMEM39A-203ENST00000461654 TMEM266Q2M3C6 531 aa17.16■□□□□ 0.34
TMEM39A-203ENST00000461654 AXDND1Q5T1B0 1012 aaPredicted RBP17.16■□□□□ 0.34
TMEM39A-203ENST00000461654 CAVIN1Q6NZI2 390 aaKnown RBP17.16■□□□□ 0.34
TMEM39A-203ENST00000461654 C7orf61Q8IZ16 206 aa17.16■□□□□ 0.34
TMEM39A-203ENST00000461654 SYTL5Q8TDW5 730 aaPredicted RBP17.16■□□□□ 0.34
TMEM39A-203ENST00000461654 SENP6Q9GZR1 1112 aaPredicted RBP17.16■□□□□ 0.34
TMEM39A-203ENST00000461654 FRMPD3Q5JV73 1810 aa17.16■□□□□ 0.34
TMEM39A-203ENST00000461654 CYP3A7-CYP3A51PA0A087WV96 503 aa17.15■□□□□ 0.34
TMEM39A-203ENST00000461654 VWA3AA6NCI4 1184 aa17.15■□□□□ 0.34
TMEM39A-203ENST00000461654 TDP2O95551 362 aa17.15■□□□□ 0.34
TMEM39A-203ENST00000461654 SNAI1O95863 264 aaPredicted RBP17.15■□□□□ 0.34
TMEM39A-203ENST00000461654 CYP3A4P08684 503 aa17.15■□□□□ 0.34
TMEM39A-203ENST00000461654 CYP3A7P24462 503 aa17.15■□□□□ 0.34
TMEM39A-203ENST00000461654 FAM160A1Q05DH4 1040 aa17.15■□□□□ 0.34
TMEM39A-203ENST00000461654 BAATQ14032 418 aaPredicted RBP17.15■□□□□ 0.34
TMEM39A-203ENST00000461654 LRRC26Q2I0M4 334 aa17.15■□□□□ 0.34
TMEM39A-203ENST00000461654 FGD4Q96M96 766 aa17.15■□□□□ 0.34
TMEM39A-203ENST00000461654 GDF15Q99988 308 aa17.15■□□□□ 0.34
TMEM39A-203ENST00000461654 RAB34Q9BZG1 259 aa17.15■□□□□ 0.34
TMEM39A-203ENST00000461654 DDX19AQ9NUU7 478 aaKnown RBP17.15■□□□□ 0.34
TMEM39A-203ENST00000461654 ALPK3Q96L96 1907 aa17.15■□□□□ 0.34
TMEM39A-203ENST00000461654 KINO60870 393 aaKnown RBP17.14■□□□□ 0.33
TMEM39A-203ENST00000461654 RARBP10826 455 aa17.14■□□□□ 0.33
TMEM39A-203ENST00000461654 AKR1A1P14550 325 aa17.14■□□□□ 0.33
TMEM39A-203ENST00000461654 LONP1P36776 959 aaKnown RBP17.14■□□□□ 0.33
TMEM39A-203ENST00000461654 TXLNAP40222 546 aa17.14■□□□□ 0.33
TMEM39A-203ENST00000461654 GJC2Q5T442 439 aaPredicted RBP17.14■□□□□ 0.33
TMEM39A-203ENST00000461654 RESP18Q5W5W9 173 aa17.14■□□□□ 0.33
TMEM39A-203ENST00000461654 SLC30A10Q6XR72 485 aa17.14■□□□□ 0.33
TMEM39A-203ENST00000461654 C4orf32Q8N8J7 132 aa17.14■□□□□ 0.33
TMEM39A-203ENST00000461654 FAM133AQ8N9E0 248 aa17.14■□□□□ 0.33
TMEM39A-203ENST00000461654 CRYGNQ8WXF5 182 aa17.14■□□□□ 0.33
TMEM39A-203ENST00000461654 CLIC6Q96NY7 704 aa17.14■□□□□ 0.33
TMEM39A-203ENST00000461654 CSRNP2Q9H175 543 aa17.14■□□□□ 0.33
TMEM39A-203ENST00000461654 MRVI1Q9Y6F6 885 aa17.14■□□□□ 0.33
TMEM39A-203ENST00000461654 A0A1B0GVL5 298 aa17.13■□□□□ 0.33
TMEM39A-203ENST00000461654 LIG1P18858 919 aa17.13■□□□□ 0.33
TMEM39A-203ENST00000461654 CIITAP33076 1130 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms