RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 ZNF761Q86XN6 746 aaPredicted RBP6.76□□□□□ -1.33
UBA3-204ENST00000461522 TTLL6Q8N841 843 aa6.76□□□□□ -1.33
UBA3-204ENST00000461522 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.76□□□□□ -1.33
UBA3-204ENST00000461522 AARSD1Q9BTE6 412 aaKnown RBP6.76□□□□□ -1.33
UBA3-204ENST00000461522 EPB41L1Q9H4G0 881 aa6.76□□□□□ -1.33
UBA3-204ENST00000461522 NGRNQ9NPE2 291 aaKnown RBP6.76□□□□□ -1.33
UBA3-204ENST00000461522 ARHGEF4Q9NR80 690 aa6.76□□□□□ -1.33
UBA3-204ENST00000461522 USP40Q9NVE5 1235 aa6.76□□□□□ -1.33
UBA3-204ENST00000461522 TCRBV5S2A0A599 114 aa6.75□□□□□ -1.33
UBA3-204ENST00000461522 IQCA1LA6NCM1 817 aa6.75□□□□□ -1.33
UBA3-204ENST00000461522 MSCO60682 206 aa6.75□□□□□ -1.33
UBA3-204ENST00000461522 CELA3BP08861 270 aa6.75□□□□□ -1.33
UBA3-204ENST00000461522 FGFR1P11362 822 aa6.75□□□□□ -1.33
UBA3-204ENST00000461522 RPL13P26373 211 aaKnown RBP6.75□□□□□ -1.33
UBA3-204ENST00000461522 ZC3H6P61129 1189 aaKnown RBP6.75□□□□□ -1.33
UBA3-204ENST00000461522 RTP5Q14D33 572 aa6.75□□□□□ -1.33
UBA3-204ENST00000461522 ERICH6BQ5W0A0 696 aa6.75□□□□□ -1.33
UBA3-204ENST00000461522 RSPO2Q6UXX9 243 aaPredicted RBP6.75□□□□□ -1.33
UBA3-204ENST00000461522 ADAMTS17Q8TE56 1095 aa6.75□□□□□ -1.33
UBA3-204ENST00000461522 PCDHB4Q9Y5E5 795 aa6.75□□□□□ -1.33
UBA3-204ENST00000461522 DGKIO75912 1065 aa6.74□□□□□ -1.33
UBA3-204ENST00000461522 GJA9P57773 515 aa6.74□□□□□ -1.33
UBA3-204ENST00000461522 PRR31Q5SQ13 230 aa6.74□□□□□ -1.33
UBA3-204ENST00000461522 LCE5AQ5TCM9 118 aa6.74□□□□□ -1.33
UBA3-204ENST00000461522 ARRDC4Q8NCT1 418 aa6.74□□□□□ -1.33
UBA3-204ENST00000461522 OSBP2Q969R2 916 aa6.74□□□□□ -1.33
UBA3-204ENST00000461522 ZNF669Q96BR6 464 aaPredicted RBP6.74□□□□□ -1.33
UBA3-204ENST00000461522 PHF20Q9BVI0 1012 aa6.74□□□□□ -1.33
UBA3-204ENST00000461522 LNPKQ9C0E8 428 aa6.74□□□□□ -1.33
UBA3-204ENST00000461522 DTLQ9NZJ0 730 aa6.74□□□□□ -1.33
UBA3-204ENST00000461522 PRODHO43272 600 aa6.73□□□□□ -1.33
UBA3-204ENST00000461522 NKX3-2P78367 333 aa6.73□□□□□ -1.33
UBA3-204ENST00000461522 ADAM9Q13443 819 aa6.73□□□□□ -1.33
UBA3-204ENST00000461522 NTRK3Q16288 839 aa6.73□□□□□ -1.33
UBA3-204ENST00000461522 NAALADL2Q58DX5 795 aa6.73□□□□□ -1.33
UBA3-204ENST00000461522 USP53Q70EK8 1073 aa6.73□□□□□ -1.33
UBA3-204ENST00000461522 STK32CQ86UX6 486 aa6.73□□□□□ -1.33
UBA3-204ENST00000461522 PHOSPHO1Q8TCT1 267 aa6.73□□□□□ -1.33
UBA3-204ENST00000461522 DCAF4Q8WV16 495 aa6.73□□□□□ -1.33
UBA3-204ENST00000461522 TOE1Q96GM8 510 aaKnown RBP6.73□□□□□ -1.33
UBA3-204ENST00000461522 YIPF4Q9BSR8 244 aa6.73□□□□□ -1.33
UBA3-204ENST00000461522 KRTAP4-2Q9BYR5 136 aa6.73□□□□□ -1.33
UBA3-204ENST00000461522 PPARGC1AQ9UBK2 798 aaKnown RBP6.73□□□□□ -1.33
UBA3-204ENST00000461522 MSRB2Q9Y3D2 182 aa6.73□□□□□ -1.33
UBA3-204ENST00000461522 DUSP10Q9Y6W6 482 aa6.73□□□□□ -1.33
UBA3-204ENST00000461522 PABPC1P11940 636 aaKnown RBP6.72□□□□□ -1.33
UBA3-204ENST00000461522 UBXN11Q5T124 520 aa6.72□□□□□ -1.33
UBA3-204ENST00000461522 CYP4F22Q6NT55 531 aa6.72□□□□□ -1.33
UBA3-204ENST00000461522 TEPPQ6URK8 271 aa6.72□□□□□ -1.33
UBA3-204ENST00000461522 LRRC47Q8N1G4 583 aaKnown RBP6.72□□□□□ -1.33
UBA3-204ENST00000461522 BDH2Q9BUT1 245 aa6.72□□□□□ -1.33
UBA3-204ENST00000461522 TRIM55Q9BYV6 548 aa6.72□□□□□ -1.33
UBA3-204ENST00000461522 SMOC1Q9H4F8 434 aa6.72□□□□□ -1.33
UBA3-204ENST00000461522 MYOTQ9UBF9 498 aa6.72□□□□□ -1.33
UBA3-204ENST00000461522 TRAV20A0A0B4J274 112 aa6.71□□□□□ -1.34
UBA3-204ENST00000461522 STK10O94804 968 aaKnown RBP6.71□□□□□ -1.34
UBA3-204ENST00000461522 LRG1P02750 347 aa6.71□□□□□ -1.34
UBA3-204ENST00000461522 FAM26FQ5R3K3 315 aa6.71□□□□□ -1.34
UBA3-204ENST00000461522 NSMFQ6X4W1 530 aa6.71□□□□□ -1.34
UBA3-204ENST00000461522 LBX2Q6XYB7 198 aa6.71□□□□□ -1.34
UBA3-204ENST00000461522 FERMT3Q86UX7 667 aa6.71□□□□□ -1.34
UBA3-204ENST00000461522 CKAP2LQ8IYA6 745 aa6.71□□□□□ -1.34
UBA3-204ENST00000461522 ZFYVE21Q9BQ24 234 aa6.71□□□□□ -1.34
UBA3-204ENST00000461522 JAM3Q9BX67 310 aa6.71□□□□□ -1.34
UBA3-204ENST00000461522 KRTAP4-11Q9BYQ6 195 aa6.71□□□□□ -1.34
UBA3-204ENST00000461522 SLC6A20Q9NP91 592 aa6.71□□□□□ -1.34
UBA3-204ENST00000461522 HSPBP1Q9NZL4 362 aa6.71□□□□□ -1.34
UBA3-204ENST00000461522 ASH2LQ9UBL3 628 aa6.71□□□□□ -1.34
UBA3-204ENST00000461522 KRIT1O00522 736 aa6.7□□□□□ -1.34
UBA3-204ENST00000461522 MAFKO60675 156 aa6.7□□□□□ -1.34
UBA3-204ENST00000461522 CNR2P34972 360 aa6.7□□□□□ -1.34
UBA3-204ENST00000461522 KRTAP10-2P60368 255 aa6.7□□□□□ -1.34
UBA3-204ENST00000461522 PLP2Q04941 152 aa6.7□□□□□ -1.34
UBA3-204ENST00000461522 EFEMP1Q12805 493 aa6.7□□□□□ -1.34
UBA3-204ENST00000461522 RGL3Q3MIN7 710 aa6.7□□□□□ -1.34
UBA3-204ENST00000461522 YOD1Q5VVQ6 348 aaPredicted RBP6.7□□□□□ -1.34
UBA3-204ENST00000461522 STYK1Q6J9G0 422 aa6.7□□□□□ -1.34
UBA3-204ENST00000461522 KCNT2Q6UVM3 1135 aa6.7□□□□□ -1.34
UBA3-204ENST00000461522 PIP4K2CQ8TBX8 421 aa6.7□□□□□ -1.34
UBA3-204ENST00000461522 DDX1Q92499 740 aaKnown RBP6.7□□□□□ -1.34
UBA3-204ENST00000461522 CNOT11Q9UKZ1 510 aaKnown RBP6.7□□□□□ -1.34
UBA3-204ENST00000461522 ZNF28P17035 718 aa6.69□□□□□ -1.34
UBA3-204ENST00000461522 GRK2P25098 689 aa6.69□□□□□ -1.34
UBA3-204ENST00000461522 GRK3P35626 688 aa6.69□□□□□ -1.34
UBA3-204ENST00000461522 GPR85P60893 370 aa6.69□□□□□ -1.34
UBA3-204ENST00000461522 KIZQ2M2Z5 673 aa6.69□□□□□ -1.34
UBA3-204ENST00000461522 OTOP3Q7RTS5 596 aa6.69□□□□□ -1.34
UBA3-204ENST00000461522 PRRT2Q7Z6L0 340 aaPredicted RBP6.69□□□□□ -1.34
UBA3-204ENST00000461522 TTLL11Q8NHH1 800 aa6.69□□□□□ -1.34
UBA3-204ENST00000461522 SPATA9Q9BWV2 254 aa6.69□□□□□ -1.34
UBA3-204ENST00000461522 PODXL2Q9NZ53 605 aa6.69□□□□□ -1.34
UBA3-204ENST00000461522 WASF3Q9UPY6 502 aa6.69□□□□□ -1.34
UBA3-204ENST00000461522 BLACEA4D250 179 aa6.68□□□□□ -1.34
UBA3-204ENST00000461522 DDX3XO00571 662 aaKnown RBP eCLIP6.68□□□□□ -1.34
UBA3-204ENST00000461522 PDPK1O15530 556 aa6.68□□□□□ -1.34
UBA3-204ENST00000461522 IFRD2Q12894 506 aaPredicted RBP6.68□□□□□ -1.34
UBA3-204ENST00000461522 RASGRF1Q13972 1273 aa6.68□□□□□ -1.34
UBA3-204ENST00000461522 HABP4Q5JVS0 413 aaKnown RBP6.68□□□□□ -1.34
UBA3-204ENST00000461522 NBPF6Q5VWK0 638 aa6.68□□□□□ -1.34
UBA3-204ENST00000461522 MCTP2Q6DN12 878 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms