RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 PPTC7Q8NI37 304 aa17.67■□□□□ 0.42
VARS-219ENST00000461328 TM6SF1Q9BZW5 370 aa17.67■□□□□ 0.42
VARS-219ENST00000461328 WNT8AQ9H1J5 351 aa17.67■□□□□ 0.42
VARS-219ENST00000461328 IL23AQ9NPF7 189 aa17.67■□□□□ 0.42
VARS-219ENST00000461328 NOD1Q9Y239 953 aa17.67■□□□□ 0.42
VARS-219ENST00000461328 SCN10AQ9Y5Y9 1956 aa17.67■□□□□ 0.42
VARS-219ENST00000461328 SPDYE3A6NKU9 549 aa17.66■□□□□ 0.42
VARS-219ENST00000461328 hCG_1984214I3L0E3 225 aa17.66■□□□□ 0.42
VARS-219ENST00000461328 MEIS2O14770 477 aa17.66■□□□□ 0.42
VARS-219ENST00000461328 STAM2O75886 525 aa17.66■□□□□ 0.42
VARS-219ENST00000461328 TGFB3P10600 412 aa17.66■□□□□ 0.42
VARS-219ENST00000461328 UBA1P22314 1058 aaKnown RBP17.66■□□□□ 0.42
VARS-219ENST00000461328 AKAP17AQ02040 695 aaKnown RBP17.66■□□□□ 0.42
VARS-219ENST00000461328 FUT2Q10981 343 aa17.66■□□□□ 0.42
VARS-219ENST00000461328 TMEM240Q5SV17 173 aa17.66■□□□□ 0.42
VARS-219ENST00000461328 CELF3Q5SZQ8 465 aaKnown RBP17.66■□□□□ 0.42
VARS-219ENST00000461328 FAM109BQ6ICB4 259 aaPredicted RBP17.66■□□□□ 0.42
VARS-219ENST00000461328 PPP1R18Q6NYC8 613 aa17.66■□□□□ 0.42
VARS-219ENST00000461328 C16orf59Q7L2K0 433 aa17.66■□□□□ 0.42
VARS-219ENST00000461328 FBXL16Q8N461 479 aa17.66■□□□□ 0.42
VARS-219ENST00000461328 ZNF713Q8N859 430 aaPredicted RBP17.66■□□□□ 0.42
VARS-219ENST00000461328 SPATA33Q96N06 139 aa17.66■□□□□ 0.42
VARS-219ENST00000461328 AGXT2Q9BYV1 514 aa17.66■□□□□ 0.42
VARS-219ENST00000461328 EHMT1Q9H9B1 1298 aa17.66■□□□□ 0.42
VARS-219ENST00000461328 MLXIPQ9HAP2 919 aa17.66■□□□□ 0.42
VARS-219ENST00000461328 FAM217BQ9NTX9 383 aaPredicted RBP17.66■□□□□ 0.42
VARS-219ENST00000461328 PDRG1Q9NUG6 133 aa17.66■□□□□ 0.42
VARS-219ENST00000461328 MTMR10Q9NXD2 777 aa17.66■□□□□ 0.42
VARS-219ENST00000461328 NID2Q14112 1375 aa17.66■□□□□ 0.42
VARS-219ENST00000461328 ADCY7P51828 1080 aa17.65■□□□□ 0.42
VARS-219ENST00000461328 CCT2P78371 535 aaKnown RBP17.65■□□□□ 0.42
VARS-219ENST00000461328 MRPS9P82933 396 aaKnown RBP17.65■□□□□ 0.42
VARS-219ENST00000461328 SP2Q02086 613 aa17.65■□□□□ 0.42
VARS-219ENST00000461328 MYSM1Q5VVJ2 828 aa17.65■□□□□ 0.42
VARS-219ENST00000461328 ZNF365Q70YC5 407 aa17.65■□□□□ 0.42
VARS-219ENST00000461328 KAT2BQ92831 832 aa17.65■□□□□ 0.42
VARS-219ENST00000461328 FAM161BQ96MY7 647 aa17.65■□□□□ 0.42
VARS-219ENST00000461328 KATNAL1Q9BW62 490 aa17.65■□□□□ 0.42
VARS-219ENST00000461328 RTEL1Q9NZ71 1219 aa17.65■□□□□ 0.42
VARS-219ENST00000461328 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.64■□□□□ 0.41
VARS-219ENST00000461328 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.64■□□□□ 0.41
VARS-219ENST00000461328 STXBP3O00186 592 aa17.64■□□□□ 0.41
VARS-219ENST00000461328 FIBPO43427 364 aa17.64■□□□□ 0.41
VARS-219ENST00000461328 FGBP02675 491 aa17.64■□□□□ 0.41
VARS-219ENST00000461328 ZNF286BP0CG31 522 aa17.64■□□□□ 0.41
VARS-219ENST00000461328 PSEN2P49810 448 aa17.64■□□□□ 0.41
VARS-219ENST00000461328 TOB2Q14106 344 aaPredicted RBP17.64■□□□□ 0.41
VARS-219ENST00000461328 HSDL1Q3SXM5 330 aa17.64■□□□□ 0.41
VARS-219ENST00000461328 PCNX4Q63HM2 1172 aa17.64■□□□□ 0.41
VARS-219ENST00000461328 XRRA1Q6P2D8 792 aa17.64■□□□□ 0.41
VARS-219ENST00000461328 SESTD1Q86VW0 696 aa17.64■□□□□ 0.41
VARS-219ENST00000461328 C7orf31Q8N865 590 aa17.64■□□□□ 0.41
VARS-219ENST00000461328 SCLYQ96I15 445 aa17.64■□□□□ 0.41
VARS-219ENST00000461328 INPP4AQ96PE3 977 aaPredicted RBP17.64■□□□□ 0.41
VARS-219ENST00000461328 ALG1Q9BT22 464 aa17.64■□□□□ 0.41
VARS-219ENST00000461328 NCOA5Q9HCD5 579 aaKnown RBP17.64■□□□□ 0.41
VARS-219ENST00000461328 LAMA2P24043 3122 aaKnown RBP17.64■□□□□ 0.41
VARS-219ENST00000461328 PPFIA3O75145 1194 aa17.63■□□□□ 0.41
VARS-219ENST00000461328 PPFIA4O75335 1185 aa17.63■□□□□ 0.41
VARS-219ENST00000461328 F2P00734 622 aa17.63■□□□□ 0.41
VARS-219ENST00000461328 SCG2P13521 617 aa17.63■□□□□ 0.41
VARS-219ENST00000461328 PDIA3P30101 505 aaKnown RBP17.63■□□□□ 0.41
VARS-219ENST00000461328 ICAM3P32942 547 aa17.63■□□□□ 0.41
VARS-219ENST00000461328 ANAPC15P60006 121 aa17.63■□□□□ 0.41
VARS-219ENST00000461328 MFSD10Q14728 455 aa17.63■□□□□ 0.41
VARS-219ENST00000461328 PTGISQ16647 500 aa17.63■□□□□ 0.41
VARS-219ENST00000461328 PFKFB3Q16875 520 aaPredicted RBP17.63■□□□□ 0.41
VARS-219ENST00000461328 RPUSD2Q8IZ73 545 aaKnown RBP17.63■□□□□ 0.41
VARS-219ENST00000461328 RETREG2Q8NC44 543 aa17.63■□□□□ 0.41
VARS-219ENST00000461328 PHKBQ93100 1093 aa17.63■□□□□ 0.41
VARS-219ENST00000461328 LARP6Q9BRS8 491 aaKnown RBP17.63■□□□□ 0.41
VARS-219ENST00000461328 SLC26A6Q9BXS9 759 aa17.63■□□□□ 0.41
VARS-219ENST00000461328 MTIF3Q9H2K0 278 aaKnown RBP17.63■□□□□ 0.41
VARS-219ENST00000461328 BARHL2Q9NY43 387 aa17.63■□□□□ 0.41
VARS-219ENST00000461328 SMCO2A6NFE2 343 aa17.62■□□□□ 0.41
VARS-219ENST00000461328 SPATA31C2B4DYI2 1134 aa17.62■□□□□ 0.41
VARS-219ENST00000461328 NOP56O00567 594 aaKnown RBP17.62■□□□□ 0.41
VARS-219ENST00000461328 CPLX1O14810 134 aa17.62■□□□□ 0.41
VARS-219ENST00000461328 HOXD8P13378 290 aaPredicted RBP17.62■□□□□ 0.41
VARS-219ENST00000461328 STK3Q13188 491 aa17.62■□□□□ 0.41
VARS-219ENST00000461328 BFSP2Q13515 415 aa17.62■□□□□ 0.41
VARS-219ENST00000461328 NEDD9Q14511 834 aa17.62■□□□□ 0.41
VARS-219ENST00000461328 KIAA0753Q2KHM9 967 aa17.62■□□□□ 0.41
VARS-219ENST00000461328 GDF6Q6KF10 455 aaPredicted RBP17.62■□□□□ 0.41
VARS-219ENST00000461328 TYW1BQ6NUM6 668 aa17.62■□□□□ 0.41
VARS-219ENST00000461328 NLRX1Q86UT6 975 aa17.62■□□□□ 0.41
VARS-219ENST00000461328 CCDC12Q8WUD4 166 aaPredicted RBP17.62■□□□□ 0.41
VARS-219ENST00000461328 HERVK_113Q902F9 699 aa17.62■□□□□ 0.41
VARS-219ENST00000461328 GLT8D2Q9H1C3 349 aa17.62■□□□□ 0.41
VARS-219ENST00000461328 RIC8AQ9NPQ8 531 aa17.62■□□□□ 0.41
VARS-219ENST00000461328 HDAC6Q9UBN7 1215 aa17.62■□□□□ 0.41
VARS-219ENST00000461328 PCDHA6Q9UN73 950 aa17.62■□□□□ 0.41
VARS-219ENST00000461328 STXBP5LQ9Y2K9 1186 aa17.62■□□□□ 0.41
VARS-219ENST00000461328 PCDHA8Q9Y5H6 950 aa17.62■□□□□ 0.41
VARS-219ENST00000461328 MYH7BA7E2Y1 1941 aa17.61■□□□□ 0.41
VARS-219ENST00000461328 PITPNM1O00562 1244 aa17.61■□□□□ 0.41
VARS-219ENST00000461328 PRPF3O43395 683 aaKnown RBP17.61■□□□□ 0.41
VARS-219ENST00000461328 EVCP57679 992 aa17.61■□□□□ 0.41
VARS-219ENST00000461328 SEMA3FQ13275 785 aa17.61■□□□□ 0.41
VARS-219ENST00000461328 RASIP1Q5U651 963 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms