RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 HDAC6Q9UBN7 1215 aa16.96■□□□□ 0.31
DNMT3A-207ENST00000461228 INSL6Q9Y581 213 aa16.96■□□□□ 0.31
DNMT3A-207ENST00000461228 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.95■□□□□ 0.3
DNMT3A-207ENST00000461228 KDM4AO75164 1064 aa16.95■□□□□ 0.3
DNMT3A-207ENST00000461228 LGR5O75473 907 aa16.95■□□□□ 0.3
DNMT3A-207ENST00000461228 STAM2O75886 525 aa16.95■□□□□ 0.3
DNMT3A-207ENST00000461228 SDSP20132 328 aa16.95■□□□□ 0.3
DNMT3A-207ENST00000461228 PUS10Q3MIT2 529 aaKnown RBP16.95■□□□□ 0.3
DNMT3A-207ENST00000461228 LEXMQ3ZCV2 418 aa16.95■□□□□ 0.3
DNMT3A-207ENST00000461228 TIGD5Q53EQ6 642 aa16.95■□□□□ 0.3
DNMT3A-207ENST00000461228 TMEM31Q5JXX7 168 aa16.95■□□□□ 0.3
DNMT3A-207ENST00000461228 MYSM1Q5VVJ2 828 aa16.95■□□□□ 0.3
DNMT3A-207ENST00000461228 SEPT14Q6ZU15 432 aa16.95■□□□□ 0.3
DNMT3A-207ENST00000461228 GDPD5Q8WTR4 605 aa16.95■□□□□ 0.3
DNMT3A-207ENST00000461228 ZBED2Q9BTP6 218 aa16.95■□□□□ 0.3
DNMT3A-207ENST00000461228 UBE2ZQ9H832 354 aaPredicted RBP16.95■□□□□ 0.3
DNMT3A-207ENST00000461228 JMJD4Q9H9V9 463 aa16.95■□□□□ 0.3
DNMT3A-207ENST00000461228 CERS4Q9HA82 394 aa16.95■□□□□ 0.3
DNMT3A-207ENST00000461228 SUGCTQ9HAC7 445 aa16.95■□□□□ 0.3
DNMT3A-207ENST00000461228 CTNNA3Q9UI47 895 aa16.95■□□□□ 0.3
DNMT3A-207ENST00000461228 ZBTB5O15062 677 aa16.94■□□□□ 0.3
DNMT3A-207ENST00000461228 RGS20O76081 388 aa16.94■□□□□ 0.3
DNMT3A-207ENST00000461228 MBTPS1Q14703 1052 aa16.94■□□□□ 0.3
DNMT3A-207ENST00000461228 IMMTQ16891 758 aaKnown RBP16.94■□□□□ 0.3
DNMT3A-207ENST00000461228 LRFN3Q9BTN0 628 aa16.94■□□□□ 0.3
DNMT3A-207ENST00000461228 UBA5Q9GZZ9 404 aa16.94■□□□□ 0.3
DNMT3A-207ENST00000461228 ZNF318Q5VUA4 2279 aa16.94■□□□□ 0.3
DNMT3A-207ENST00000461228 KAT6AQ92794 2004 aa16.93■□□□□ 0.3
DNMT3A-207ENST00000461228 PI4K2BG5E9Z4 385 aa16.93■□□□□ 0.3
DNMT3A-207ENST00000461228 AMHP03971 560 aa16.93■□□□□ 0.3
DNMT3A-207ENST00000461228 ZNF286BP0CG31 522 aa16.93■□□□□ 0.3
DNMT3A-207ENST00000461228 EIF2AK2P19525 551 aaKnown RBP16.93■□□□□ 0.3
DNMT3A-207ENST00000461228 UBA1P22314 1058 aaKnown RBP16.93■□□□□ 0.3
DNMT3A-207ENST00000461228 PLEKHG4Q58EX7 1191 aa16.93■□□□□ 0.3
DNMT3A-207ENST00000461228 CELF3Q5SZQ8 465 aaKnown RBP16.93■□□□□ 0.3
DNMT3A-207ENST00000461228 KRT40Q6A162 431 aa16.93■□□□□ 0.3
DNMT3A-207ENST00000461228 VSIG10LQ86VR7 867 aa16.93■□□□□ 0.3
DNMT3A-207ENST00000461228 DHX37Q8IY37 1157 aaKnown RBP16.93■□□□□ 0.3
DNMT3A-207ENST00000461228 UBAC1Q9BSL1 405 aa16.93■□□□□ 0.3
DNMT3A-207ENST00000461228 DOCK5Q9H7D0 1870 aa16.93■□□□□ 0.3
DNMT3A-207ENST00000461228 TRIM6-TRIM34B2RNG4 842 aa16.92■□□□□ 0.3
DNMT3A-207ENST00000461228 PGM5Q15124 567 aa16.92■□□□□ 0.3
DNMT3A-207ENST00000461228 PTPROQ16827 1216 aa16.92■□□□□ 0.3
DNMT3A-207ENST00000461228 ZNF618Q5T7W0 954 aa16.92■□□□□ 0.3
DNMT3A-207ENST00000461228 SPRED2Q7Z698 418 aa16.92■□□□□ 0.3
DNMT3A-207ENST00000461228 APBB2Q92870 758 aa16.92■□□□□ 0.3
DNMT3A-207ENST00000461228 MRPL38Q96DV4 380 aaKnown RBP16.92■□□□□ 0.3
DNMT3A-207ENST00000461228 ZKSCAN3Q9BRR0 538 aa16.92■□□□□ 0.3
DNMT3A-207ENST00000461228 C16orf70Q9BSU1 422 aa16.92■□□□□ 0.3
DNMT3A-207ENST00000461228 CPVLQ9H3G5 476 aa16.92■□□□□ 0.3
DNMT3A-207ENST00000461228 C11orf16Q9NQ32 467 aa16.92■□□□□ 0.3
DNMT3A-207ENST00000461228 DIAPH3Q9NSV4 1193 aa16.92■□□□□ 0.3
DNMT3A-207ENST00000461228 B4E1Z4 1266 aa16.91■□□□□ 0.3
DNMT3A-207ENST00000461228 CFBP00751 764 aa16.91■□□□□ 0.3
DNMT3A-207ENST00000461228 SEC23AQ15436 765 aa16.91■□□□□ 0.3
DNMT3A-207ENST00000461228 HSDL1Q3SXM5 330 aa16.91■□□□□ 0.3
DNMT3A-207ENST00000461228 GNPTABQ3T906 1256 aa16.91■□□□□ 0.3
DNMT3A-207ENST00000461228 IFIT1BQ5T764 474 aaKnown RBP16.91■□□□□ 0.3
DNMT3A-207ENST00000461228 TBC1D5Q92609 795 aa16.91■□□□□ 0.3
DNMT3A-207ENST00000461228 WNT8BQ93098 351 aa16.91■□□□□ 0.3
DNMT3A-207ENST00000461228 INPP4AQ96PE3 977 aaPredicted RBP16.91■□□□□ 0.3
DNMT3A-207ENST00000461228 ZSWIM5Q9P217 1185 aa16.91■□□□□ 0.3
DNMT3A-207ENST00000461228 RAPGEFL1Q9UHV5 662 aa16.91■□□□□ 0.3
DNMT3A-207ENST00000461228 TRIOO75962 3097 aa16.91■□□□□ 0.3
DNMT3A-207ENST00000461228 PRR33A8MZF0 331 aa16.9■□□□□ 0.3
DNMT3A-207ENST00000461228 DHX16O60231 1041 aaKnown RBP16.9■□□□□ 0.3
DNMT3A-207ENST00000461228 GGPS1O95749 300 aa16.9■□□□□ 0.3
DNMT3A-207ENST00000461228 CCND2P30279 289 aa16.9■□□□□ 0.3
DNMT3A-207ENST00000461228 ICAM3P32942 547 aa16.9■□□□□ 0.3
DNMT3A-207ENST00000461228 TCTN1Q2MV58 587 aa16.9■□□□□ 0.3
DNMT3A-207ENST00000461228 METTL7BQ6UX53 244 aa16.9■□□□□ 0.3
DNMT3A-207ENST00000461228 CHST3Q7LGC8 479 aa16.9■□□□□ 0.3
DNMT3A-207ENST00000461228 RPAINQ86UA6 219 aa16.9■□□□□ 0.3
DNMT3A-207ENST00000461228 FAM178BQ8IXR5 827 aa16.9■□□□□ 0.3
DNMT3A-207ENST00000461228 FBXO22Q8NEZ5 403 aa16.9■□□□□ 0.3
DNMT3A-207ENST00000461228 NEK9Q8TD19 979 aa16.9■□□□□ 0.3
DNMT3A-207ENST00000461228 PPP1R13LQ8WUF5 828 aa16.9■□□□□ 0.3
DNMT3A-207ENST00000461228 SPATA33Q96N06 139 aa16.9■□□□□ 0.3
DNMT3A-207ENST00000461228 LNPKQ9C0E8 428 aa16.9■□□□□ 0.3
DNMT3A-207ENST00000461228 WDFY4Q6ZS81 3184 aa16.89■□□□□ 0.3
DNMT3A-207ENST00000461228 C5orf42Q9H799 3197 aa16.89■□□□□ 0.29
DNMT3A-207ENST00000461228 PALM3A6NDB9 673 aaPredicted RBP16.89■□□□□ 0.29
DNMT3A-207ENST00000461228 RSPH10B2B2RC85 870 aa16.89■□□□□ 0.29
DNMT3A-207ENST00000461228 PPP1R11O60927 126 aaPredicted RBP16.89■□□□□ 0.29
DNMT3A-207ENST00000461228 RSPH10BP0C881 870 aa16.89■□□□□ 0.29
DNMT3A-207ENST00000461228 PLEKHM2Q8IWE5 1019 aa16.89■□□□□ 0.29
DNMT3A-207ENST00000461228 RILPL2Q969X0 211 aa16.89■□□□□ 0.29
DNMT3A-207ENST00000461228 USP26Q9BXU7 913 aa16.89■□□□□ 0.29
DNMT3A-207ENST00000461228 KCNH6Q9H252 994 aa16.89■□□□□ 0.29
DNMT3A-207ENST00000461228 EPHX3Q9H6B9 360 aa16.89■□□□□ 0.29
DNMT3A-207ENST00000461228 RIOX1Q9H6W3 641 aa16.89■□□□□ 0.29
DNMT3A-207ENST00000461228 PRKAG3Q9UGI9 489 aa16.89■□□□□ 0.29
DNMT3A-207ENST00000461228 MAD2L2Q9UI95 211 aa16.89■□□□□ 0.29
DNMT3A-207ENST00000461228 FAM50BQ9Y247 325 aa16.89■□□□□ 0.29
DNMT3A-207ENST00000461228 PCDHA1Q9Y5I3 950 aa16.89■□□□□ 0.29
DNMT3A-207ENST00000461228 BAZ2BQ9UIF8 2168 aaKnown RBP16.89■□□□□ 0.29
DNMT3A-207ENST00000461228 TTC3P53804 2025 aa16.89■□□□□ 0.29
DNMT3A-207ENST00000461228 KIAA1671Q9BY89 1806 aa16.89■□□□□ 0.29
DNMT3A-207ENST00000461228 C17orf102A2RUQ5 167 aa16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 KLRF2D3W0D1 207 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms