RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 FAM170AA1A519 330 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 PLTPP55058 493 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 ZC3H12BQ5HYM0 836 aaKnown RBP9.71□□□□□ -0.85
BRCA1-205ENST00000461221 CYP4F22Q6NT55 531 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 KSR1Q8IVT5 923 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 AK8Q96MA6 479 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 ATP8A1Q9Y2Q0 1164 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 DNMBPQ6XZF7 1577 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 KLRF2D3W0D1 207 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 CFLARO15519 480 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 DCTN3O75935 186 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 PAMP19021 973 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 CERKLQ49MI3 558 aaPredicted RBP9.71□□□□□ -0.85
BRCA1-205ENST00000461221 TAF1BQ53T94 588 aaPredicted RBP9.71□□□□□ -0.85
BRCA1-205ENST00000461221 FAM133BQ5BKY9 247 aaKnown RBP9.71□□□□□ -0.85
BRCA1-205ENST00000461221 GADL1Q6ZQY3 521 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 NCAPG2Q86XI2 1143 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 KCTD6Q8NC69 237 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 GJA10Q969M2 543 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 VPS39Q96JC1 886 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 PPP1R13BQ96KQ4 1090 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 C19orf44Q9H6X5 657 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 CHCHD3Q9NX63 227 aaKnown RBP9.71□□□□□ -0.85
BRCA1-205ENST00000461221 THRAP3Q9Y2W1 955 aaKnown RBP9.71□□□□□ -0.85
BRCA1-205ENST00000461221 SNX5Q9Y5X3 404 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 GUCY2CP25092 1073 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 TRAPPC10P48553 1259 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 POLA2Q14181 598 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 KRT33BQ14525 404 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 ME3Q16798 604 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 SLC35F6Q8N357 371 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 CDC26Q8NHZ8 85 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 SYMPKQ92797 1274 aaKnown RBP9.71□□□□□ -0.85
BRCA1-205ENST00000461221 MTBPQ96DY7 904 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 YY1AP1Q9H869 796 aa9.71□□□□□ -0.85
BRCA1-205ENST00000461221 SEPT9Q9UHD8 586 aaPredicted RBP9.71□□□□□ -0.85
BRCA1-205ENST00000461221 EXOC1LA0A1B0GW35 172 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 ANXA13P27216 316 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 PMLP29590 882 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 SURF1Q15526 300 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 MIS18BP1Q6P0N0 1132 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 G2E3Q7L622 706 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 IFNL3Q8IZI9 196 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 NEK9Q8TD19 979 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 ABCC12Q96J65 1359 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 SYCE1LA8MT33 242 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 RASGRF2O14827 1237 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 PRPSAP2O60256 369 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 TMCC1O94876 653 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 SERPINB2P05120 415 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 PAPOLAP51003 745 aaKnown RBP9.71□□□□□ -0.86
BRCA1-205ENST00000461221 CCNA1P78396 465 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 ICA1Q05084 483 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 ADCY2Q08462 1091 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 GRAMD1BQ3KR37 738 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 FSCBQ5H9T9 825 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 KRT39Q6A163 491 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 CRLF3Q8IUI8 442 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 GDAP1Q8TB36 358 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 CABLES1Q8TDN4 633 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 OTUD7AQ8TE49 926 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-205ENST00000461221 LZICQ8WZA0 190 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 NCLNQ969V3 563 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 CFAP36Q96G28 342 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 TMEM63CQ9P1W3 806 aa9.71□□□□□ -0.86
BRCA1-205ENST00000461221 TRPC5Q9UL62 973 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-205ENST00000461221 A0A1W2PQ27 194 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 A0A1W2PQ64 194 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 A0A1W2PQD8 194 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 USP17L12C9JPN9 530 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 USP17L21D6R901 530 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 DHX9Q08211 1270 aaKnown RBP9.7□□□□□ -0.86
BRCA1-205ENST00000461221 SEPT2Q15019 361 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 MAN2A1Q16706 1144 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 ARL13BQ3SXY8 428 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 MFSD14BQ5SR56 506 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 C6orf118Q5T5N4 469 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 GCNAQ96QF7 691 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 USP28Q96RU2 1077 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 APOL6Q9BWW8 343 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 LRRC4Q9HBW1 653 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 CUL7Q14999 1698 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 SLC4A1P02730 911 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 MYL1P05976 194 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 NR2F2P24468 414 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 CASP14P31944 242 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 NEK2P51955 445 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 IGBP1P78318 339 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 MDM2Q00987 491 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-205ENST00000461221 KIF19Q2TAC6 998 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 C16orf87Q6PH81 154 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 CENPUQ71F23 418 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 NUDCD3Q8IVD9 361 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 SLC7A3Q8WY07 619 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 LARP4BQ92615 738 aaKnown RBP9.7□□□□□ -0.86
BRCA1-205ENST00000461221 SLC52A2Q9HAB3 445 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 CDV3Q9UKY7 258 aaKnown RBP9.7□□□□□ -0.86
BRCA1-205ENST00000461221 PLS3P13797 630 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 KRT4P19013 534 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 MYO1EQ12965 1108 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms