RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 SP2Q02086 613 aa25.81■■□□□ 1.72
TRAF4-207ENST00000461195 DGKDQ16760 1214 aa25.81■■□□□ 1.72
TRAF4-207ENST00000461195 CELF3Q5SZQ8 465 aaKnown RBP25.81■■□□□ 1.72
TRAF4-207ENST00000461195 MYSM1Q5VVJ2 828 aa25.81■■□□□ 1.72
TRAF4-207ENST00000461195 EHMT1Q9H9B1 1298 aa25.81■■□□□ 1.72
TRAF4-207ENST00000461195 PCDHA6Q9UN73 950 aa25.81■■□□□ 1.72
TRAF4-207ENST00000461195 PCDHA8Q9Y5H6 950 aa25.81■■□□□ 1.72
TRAF4-207ENST00000461195 SMCO2A6NFE2 343 aa25.8■■□□□ 1.72
TRAF4-207ENST00000461195 PRPF3O43395 683 aaKnown RBP25.8■■□□□ 1.72
TRAF4-207ENST00000461195 FIBPO43427 364 aa25.8■■□□□ 1.72
TRAF4-207ENST00000461195 UBA1P22314 1058 aaKnown RBP25.8■■□□□ 1.72
TRAF4-207ENST00000461195 CCT2P78371 535 aaKnown RBP25.8■■□□□ 1.72
TRAF4-207ENST00000461195 AKAP17AQ02040 695 aaKnown RBP25.8■■□□□ 1.72
TRAF4-207ENST00000461195 NBPF20Q3BBV1 942 aa25.8■■□□□ 1.72
TRAF4-207ENST00000461195 ZNF274Q96GC6 653 aaPredicted RBP25.8■■□□□ 1.72
TRAF4-207ENST00000461195 GLT8D2Q9H1C3 349 aa25.8■■□□□ 1.72
TRAF4-207ENST00000461195 ALDH8A1Q9H2A2 487 aaPredicted RBP25.8■■□□□ 1.72
TRAF4-207ENST00000461195 SPATA31C2B4DYI2 1134 aa25.79■■□□□ 1.72
TRAF4-207ENST00000461195 B4GALT4O60513 344 aa25.79■■□□□ 1.72
TRAF4-207ENST00000461195 NTRK3Q16288 839 aa25.79■■□□□ 1.72
TRAF4-207ENST00000461195 NFRKBQ6P4R8 1299 aa25.79■■□□□ 1.72
TRAF4-207ENST00000461195 NLRX1Q86UT6 975 aa25.79■■□□□ 1.72
TRAF4-207ENST00000461195 PHKBQ93100 1093 aa25.79■■□□□ 1.72
TRAF4-207ENST00000461195 TRPV6Q9H1D0 765 aa25.79■■□□□ 1.72
TRAF4-207ENST00000461195 MLXIPQ9HAP2 919 aa25.79■■□□□ 1.72
TRAF4-207ENST00000461195 NCOA5Q9HCD5 579 aaKnown RBP25.79■■□□□ 1.72
TRAF4-207ENST00000461195 DLL1O00548 723 aa25.78■■□□□ 1.72
TRAF4-207ENST00000461195 SORBS3O60504 671 aa25.78■■□□□ 1.72
TRAF4-207ENST00000461195 IFNAR1P17181 557 aa25.78■■□□□ 1.72
TRAF4-207ENST00000461195 FAM47CQ5HY64 1035 aa25.78■■□□□ 1.72
TRAF4-207ENST00000461195 SPATA33Q96N06 139 aa25.78■■□□□ 1.72
TRAF4-207ENST00000461195 RNF26Q9BY78 433 aaPredicted RBP25.78■■□□□ 1.72
TRAF4-207ENST00000461195 FOSP01100 380 aaPredicted RBP25.77■■□□□ 1.72
TRAF4-207ENST00000461195 SUPT20HL2P0C7V6 817 aa25.77■■□□□ 1.72
TRAF4-207ENST00000461195 FPGSQ05932 587 aa25.77■■□□□ 1.72
TRAF4-207ENST00000461195 PTPN11Q06124 597 aaPredicted RBP25.77■■□□□ 1.72
TRAF4-207ENST00000461195 SEMA3FQ13275 785 aa25.77■■□□□ 1.72
TRAF4-207ENST00000461195 NEDD9Q14511 834 aa25.77■■□□□ 1.72
TRAF4-207ENST00000461195 PKN1Q16512 942 aa25.77■■□□□ 1.72
TRAF4-207ENST00000461195 HSDL1Q3SXM5 330 aa25.77■■□□□ 1.72
TRAF4-207ENST00000461195 LRIT3Q3SXY7 679 aa25.77■■□□□ 1.72
TRAF4-207ENST00000461195 MFSD5Q6N075 450 aa25.77■■□□□ 1.72
TRAF4-207ENST00000461195 DEFB123Q8N688 67 aa25.77■■□□□ 1.72
TRAF4-207ENST00000461195 LARP6Q9BRS8 491 aaKnown RBP25.77■■□□□ 1.72
TRAF4-207ENST00000461195 SLC26A6Q9BXS9 759 aa25.77■■□□□ 1.72
TRAF4-207ENST00000461195 PPFIA4O75335 1185 aa25.76■■□□□ 1.71
TRAF4-207ENST00000461195 HOXD8P13378 290 aaPredicted RBP25.76■■□□□ 1.71
TRAF4-207ENST00000461195 CHMP4BP1P59074 171 aa25.76■■□□□ 1.71
TRAF4-207ENST00000461195 GPR153Q6NV75 609 aa25.76■■□□□ 1.71
TRAF4-207ENST00000461195 CCDC12Q8WUD4 166 aaPredicted RBP25.76■■□□□ 1.71
TRAF4-207ENST00000461195 KAT2BQ92831 832 aa25.76■■□□□ 1.71
TRAF4-207ENST00000461195 GPRASP2Q96D09 838 aa25.76■■□□□ 1.71
TRAF4-207ENST00000461195 PPP1R12CQ9BZL4 782 aa25.76■■□□□ 1.71
TRAF4-207ENST00000461195 HIPK3Q9H422 1215 aa25.76■■□□□ 1.71
TRAF4-207ENST00000461195 DOCK5Q9H7D0 1870 aa25.76■■□□□ 1.71
TRAF4-207ENST00000461195 ESYT2A0FGR8 921 aa25.75■■□□□ 1.71
TRAF4-207ENST00000461195 AP3B2Q13367 1082 aa25.75■■□□□ 1.71
TRAF4-207ENST00000461195 Q7L0L9 218 aa25.75■■□□□ 1.71
TRAF4-207ENST00000461195 IL17RAQ96F46 866 aa25.75■■□□□ 1.71
TRAF4-207ENST00000461195 CDHR1Q96JP9 859 aa25.75■■□□□ 1.71
TRAF4-207ENST00000461195 SENP7Q9BQF6 1050 aa25.75■■□□□ 1.71
TRAF4-207ENST00000461195 KATNAL1Q9BW62 490 aa25.75■■□□□ 1.71
TRAF4-207ENST00000461195 TRMT13Q9NUP7 481 aaKnown RBP25.75■■□□□ 1.71
TRAF4-207ENST00000461195 UBIAD1Q9Y5Z9 338 aa25.75■■□□□ 1.71
TRAF4-207ENST00000461195 PPFIA3O75145 1194 aa25.74■■□□□ 1.71
TRAF4-207ENST00000461195 SEC24BO95487 1268 aa25.74■■□□□ 1.71
TRAF4-207ENST00000461195 ITGB5P18084 799 aa25.74■■□□□ 1.71
TRAF4-207ENST00000461195 CLK2P49760 499 aaKnown RBP25.74■■□□□ 1.71
TRAF4-207ENST00000461195 METTL7BQ6UX53 244 aa25.74■■□□□ 1.71
TRAF4-207ENST00000461195 TRIM22Q8IYM9 498 aa25.74■■□□□ 1.71
TRAF4-207ENST00000461195 TMEM199Q8N511 208 aa25.74■■□□□ 1.71
TRAF4-207ENST00000461195 PPP1R13LQ8WUF5 828 aa25.74■■□□□ 1.71
TRAF4-207ENST00000461195 ANO3Q9BYT9 981 aa25.74■■□□□ 1.71
TRAF4-207ENST00000461195 ZMYND12Q9H0C1 365 aa25.74■■□□□ 1.71
TRAF4-207ENST00000461195 BCAS3Q9H6U6 928 aa25.74■■□□□ 1.71
TRAF4-207ENST00000461195 C6orf50Q9HD87 102 aa25.74■■□□□ 1.71
TRAF4-207ENST00000461195 NOP56O00567 594 aaKnown RBP25.73■■□□□ 1.71
TRAF4-207ENST00000461195 CPLX1O14810 134 aa25.73■■□□□ 1.71
TRAF4-207ENST00000461195 F2P00734 622 aa25.73■■□□□ 1.71
TRAF4-207ENST00000461195 ZNF286BP0CG31 522 aa25.73■■□□□ 1.71
TRAF4-207ENST00000461195 CYP2C18P33260 490 aa25.73■■□□□ 1.71
TRAF4-207ENST00000461195 PSEN2P49810 448 aa25.73■■□□□ 1.71
TRAF4-207ENST00000461195 STK3Q13188 491 aa25.73■■□□□ 1.71
TRAF4-207ENST00000461195 SHHQ15465 462 aa25.73■■□□□ 1.71
TRAF4-207ENST00000461195 CPLX2Q6PUV4 134 aaKnown RBP25.73■■□□□ 1.71
TRAF4-207ENST00000461195 CYFIP1Q7L576 1253 aa25.73■■□□□ 1.71
TRAF4-207ENST00000461195 GIMAP8Q8ND71 665 aaPredicted RBP25.73■■□□□ 1.71
TRAF4-207ENST00000461195 PGBD1Q96JS3 809 aa25.73■■□□□ 1.71
TRAF4-207ENST00000461195 NOC4LQ9BVI4 516 aaKnown RBP25.73■■□□□ 1.71
TRAF4-207ENST00000461195 TMEM260Q9NX78 707 aa25.73■■□□□ 1.71
TRAF4-207ENST00000461195 EPHB4P54760 987 aa25.72■■□□□ 1.71
TRAF4-207ENST00000461195 SSRP1Q08945 709 aaKnown RBP25.72■■□□□ 1.71
TRAF4-207ENST00000461195 PPIGQ13427 754 aaKnown RBP eCLIP25.72■■□□□ 1.716e-10■■□□□ 12.8
TRAF4-207ENST00000461195 MTMR1Q13613 665 aa25.72■■□□□ 1.71
TRAF4-207ENST00000461195 MFSD10Q14728 455 aa25.72■■□□□ 1.71
TRAF4-207ENST00000461195 ANKRD1Q15327 319 aa25.72■■□□□ 1.71
TRAF4-207ENST00000461195 C9orf50Q5SZB4 431 aa25.72■■□□□ 1.71
TRAF4-207ENST00000461195 SESTD1Q86VW0 696 aa25.72■■□□□ 1.71
TRAF4-207ENST00000461195 JADE2Q9NQC1 790 aa25.72■■□□□ 1.71
TRAF4-207ENST00000461195 CUL9Q8IWT3 2517 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms