RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 FAM184BQ9ULE4 1060 aa9.34□□□□□ -0.91
SND1-202ENST00000461056 Q9Y3F1 56 aa9.34□□□□□ -0.91
SND1-202ENST00000461056 TELO2Q9Y4R8 837 aa9.34□□□□□ -0.91
SND1-202ENST00000461056 ZNFX1Q9P2E3 1918 aaKnown RBP9.34□□□□□ -0.91
SND1-202ENST00000461056 SPDYE3A6NKU9 549 aa9.33□□□□□ -0.92
SND1-202ENST00000461056 BTBD18B2RXH4 712 aa9.33□□□□□ -0.92
SND1-202ENST00000461056 DHX15O43143 795 aaKnown RBP9.33□□□□□ -0.92
SND1-202ENST00000461056 MSCO60682 206 aa9.33□□□□□ -0.92
SND1-202ENST00000461056 MYCP01106 439 aaPredicted RBP9.33□□□□□ -0.92
SND1-202ENST00000461056 CAPN2P17655 700 aa9.33□□□□□ -0.92
SND1-202ENST00000461056 EN2P19622 333 aaPredicted RBP9.33□□□□□ -0.92
SND1-202ENST00000461056 GJB2P29033 226 aa9.33□□□□□ -0.92
SND1-202ENST00000461056 ITGB3BPQ13352 177 aaPredicted RBP9.33□□□□□ -0.92
SND1-202ENST00000461056 CEP55Q53EZ4 464 aa9.33□□□□□ -0.92
SND1-202ENST00000461056 DIS3L2Q8IYB7 885 aaKnown RBP9.33□□□□□ -0.92
SND1-202ENST00000461056 COPS5Q92905 334 aa9.33□□□□□ -0.92
SND1-202ENST00000461056 GPRASP2Q96D09 838 aa9.33□□□□□ -0.92
SND1-202ENST00000461056 PHF12Q96QT6 1004 aa9.33□□□□□ -0.92
SND1-202ENST00000461056 MXRA8Q9BRK3 442 aa9.33□□□□□ -0.92
SND1-202ENST00000461056 WDR11Q9BZH6 1224 aa9.33□□□□□ -0.92
SND1-202ENST00000461056 JADE2Q9NQC1 790 aa9.33□□□□□ -0.92
SND1-202ENST00000461056 MCM3APO60318 1980 aa9.33□□□□□ -0.92
SND1-202ENST00000461056 A6NJR5 290 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 ATP9AO75110 1047 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 TGFB3P10600 412 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 RGS19P49795 217 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 USP11P51784 963 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 SOX10P56693 466 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 TNFAIP2Q03169 654 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 LRRC41Q15345 812 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 LY6KQ17RY6 165 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 ANO1Q5XXA6 986 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 MOXD1Q6UVY6 613 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 B3GNT9Q6UX72 402 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 KRT25Q7Z3Z0 450 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 ANKLE1Q8NAG6 615 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 ETNPPLQ8TBG4 499 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 TBCKQ8TEA7 893 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 DIS3LQ8TF46 1054 aaKnown RBP9.32□□□□□ -0.92
SND1-202ENST00000461056 C8orf76Q96K31 380 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 SENP7Q9BQF6 1050 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 FOXP1Q9H334 677 aaPredicted RBP9.32□□□□□ -0.92
SND1-202ENST00000461056 KCNH7Q9NS40 1196 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 PHF24Q9UPV7 400 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 MYH6P13533 1939 aa9.32□□□□□ -0.92
SND1-202ENST00000461056 B4DLN1 442 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 DNM1LO00429 736 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 NKRFO15226 690 aaKnown RBP eCLIP9.31□□□□□ -0.92
SND1-202ENST00000461056 FIBPO43427 364 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 SLC37A4O43826 429 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 FARP2O94887 1054 aaPredicted RBP9.31□□□□□ -0.92
SND1-202ENST00000461056 TDP2O95551 362 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 PGK1P00558 417 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 ARP10275 920 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 RARBP10826 455 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 MYCLP12524 364 aaPredicted RBP9.31□□□□□ -0.92
SND1-202ENST00000461056 DDIT3P35638 169 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 KRT2P35908 639 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 TOB1P50616 345 aaPredicted RBP9.31□□□□□ -0.92
SND1-202ENST00000461056 GUCY1B3Q02153 619 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 TTLL4Q14679 1199 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 Q4G0T1 1027 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 CELF3Q5SZQ8 465 aaKnown RBP9.31□□□□□ -0.92
SND1-202ENST00000461056 MYSM1Q5VVJ2 828 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 PPP4R3AQ6IN85 833 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 SEPT14Q6ZU15 432 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 TLK2Q86UE8 772 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 AGO4Q9HCK5 861 aaKnown RBP9.31□□□□□ -0.92
SND1-202ENST00000461056 KCNMB3Q9NPA1 279 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 XPNPEP3Q9NQH7 507 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.31□□□□□ -0.92
SND1-202ENST00000461056 LAMA3Q16787 3333 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 GRIN2DO15399 1336 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 NFASCO94856 1347 aa9.31□□□□□ -0.92
SND1-202ENST00000461056 MSH4O15457 936 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 MAFGO15525 162 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 GALR2O43603 387 aaPredicted RBP9.3□□□□□ -0.92
SND1-202ENST00000461056 CCNE2O96020 404 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 TXNP10599 105 aaKnown RBP9.3□□□□□ -0.92
SND1-202ENST00000461056 XBP1P17861 261 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 SYT1P21579 422 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 CNGA1P29973 690 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 FOSBP53539 338 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 MTMR1Q13613 665 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 SNX17Q15036 470 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 NONOQ15233 471 aaKnown RBP eCLIP9.3□□□□□ -0.92
SND1-202ENST00000461056 INF2Q27J81 1249 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 GNPTABQ3T906 1256 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 KCNV1Q6PIU1 500 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 METTL7BQ6UX53 244 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 PIK3AP1Q6ZUJ8 805 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 NOSTRINQ8IVI9 506 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 SLC43A3Q8NBI5 491 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 PPTC7Q8NI37 304 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 KAT2BQ92831 832 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 HAS1Q92839 578 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 SLC5A5Q92911 643 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 MPHOSPH6Q99547 160 aaKnown RBP9.3□□□□□ -0.92
SND1-202ENST00000461056 TSEN34Q9BSV6 310 aaKnown RBP9.3□□□□□ -0.92
SND1-202ENST00000461056 RTEL1Q9NZ71 1219 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms