RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 BLOC1S2Q6QNY1 142 aa17.02■□□□□ 0.32
NCK1-202ENST00000460960 SEPT14Q6ZU15 432 aa17.02■□□□□ 0.32
NCK1-202ENST00000460960 STAG2Q8N3U4 1231 aa17.02■□□□□ 0.32
NCK1-202ENST00000460960 AFAP1L1Q8TED9 768 aa17.02■□□□□ 0.32
NCK1-202ENST00000460960 AFG1LQ8WV93 481 aa17.02■□□□□ 0.32
NCK1-202ENST00000460960 TMEM87BQ96K49 555 aa17.02■□□□□ 0.32
NCK1-202ENST00000460960 ZSWIM6Q9HCJ5 1215 aa17.02■□□□□ 0.32
NCK1-202ENST00000460960 PNMA2Q9UL42 364 aa17.02■□□□□ 0.32
NCK1-202ENST00000460960 BRPF3Q9ULD4 1205 aa17.02■□□□□ 0.32
NCK1-202ENST00000460960 BAZ2BQ9UIF8 2168 aaKnown RBP17.02■□□□□ 0.31
NCK1-202ENST00000460960 LPXNO60711 386 aa17.01■□□□□ 0.31
NCK1-202ENST00000460960 DEFB103AP81534 67 aa17.01■□□□□ 0.31
NCK1-202ENST00000460960 TROAPQ12815 778 aa17.01■□□□□ 0.31
NCK1-202ENST00000460960 SART3Q15020 963 aaKnown RBP17.01■□□□□ 0.31
NCK1-202ENST00000460960 GDF6Q6KF10 455 aaPredicted RBP17.01■□□□□ 0.31
NCK1-202ENST00000460960 LRRC8DQ7L1W4 858 aa17.01■□□□□ 0.31
NCK1-202ENST00000460960 DNERQ8NFT8 737 aa17.01■□□□□ 0.31
NCK1-202ENST00000460960 CAGE1Q8TC20 777 aa17.01■□□□□ 0.31
NCK1-202ENST00000460960 KIF2CQ99661 725 aa17.01■□□□□ 0.31
NCK1-202ENST00000460960 LARP6Q9BRS8 491 aaKnown RBP17.01■□□□□ 0.31
NCK1-202ENST00000460960 UBA5Q9GZZ9 404 aa17.01■□□□□ 0.31
NCK1-202ENST00000460960 WDR19Q8NEZ3 1342 aa17■□□□□ 0.31
NCK1-202ENST00000460960 ERICH2A1L162 156 aa17■□□□□ 0.31
NCK1-202ENST00000460960 MMP3P08254 477 aa17■□□□□ 0.31
NCK1-202ENST00000460960 SELPP16109 830 aa17■□□□□ 0.31
NCK1-202ENST00000460960 EDNRBP24530 442 aa17■□□□□ 0.31
NCK1-202ENST00000460960 HOXD11P31277 338 aaPredicted RBP17■□□□□ 0.31
NCK1-202ENST00000460960 LY6KQ17RY6 165 aa17■□□□□ 0.31
NCK1-202ENST00000460960 Q6ZUG5 572 aa17■□□□□ 0.31
NCK1-202ENST00000460960 RUFY3Q7L099 469 aa17■□□□□ 0.31
NCK1-202ENST00000460960 ZNF654Q8IZM8 581 aa17■□□□□ 0.31
NCK1-202ENST00000460960 KHSRPQ92945 711 aaKnown RBP eCLIP17■□□□□ 0.31
NCK1-202ENST00000460960 IL17RAQ96F46 866 aa17■□□□□ 0.31
NCK1-202ENST00000460960 BACH2Q9BYV9 841 aa17■□□□□ 0.31
NCK1-202ENST00000460960 BRWD1Q9NSI6 2320 aa17■□□□□ 0.31
NCK1-202ENST00000460960 MAD2L2Q9UI95 211 aa17■□□□□ 0.31
NCK1-202ENST00000460960 GH1P01241 217 aa16.99■□□□□ 0.31
NCK1-202ENST00000460960 LIFRP42702 1097 aa16.99■□□□□ 0.31
NCK1-202ENST00000460960 APOBRQ0VD83 1088 aa16.99■□□□□ 0.31
NCK1-202ENST00000460960 TOB2Q14106 344 aaPredicted RBP16.99■□□□□ 0.31
NCK1-202ENST00000460960 GRM4Q14833 912 aa16.99■□□□□ 0.31
NCK1-202ENST00000460960 CNKSR3Q6P9H4 555 aa16.99■□□□□ 0.31
NCK1-202ENST00000460960 NFXL1Q6ZNB6 911 aa16.99■□□□□ 0.31
NCK1-202ENST00000460960 ALG1Q9BT22 464 aa16.99■□□□□ 0.31
NCK1-202ENST00000460960 MTA3Q9BTC8 594 aa16.99■□□□□ 0.31
NCK1-202ENST00000460960 TM6SF1Q9BZW5 370 aa16.99■□□□□ 0.31
NCK1-202ENST00000460960 PALM3A6NDB9 673 aaPredicted RBP16.98■□□□□ 0.31
NCK1-202ENST00000460960 RBAK-RBAKDNI3L0D1 243 aa16.98■□□□□ 0.31
NCK1-202ENST00000460960 HMGB1P09429 215 aaKnown RBP16.98■□□□□ 0.31
NCK1-202ENST00000460960 SGMS1Q86VZ5 419 aa16.98■□□□□ 0.31
NCK1-202ENST00000460960 C7orf31Q8N865 590 aa16.98■□□□□ 0.31
NCK1-202ENST00000460960 DHX38Q92620 1227 aaKnown RBP16.98■□□□□ 0.31
NCK1-202ENST00000460960 BRF1Q92994 677 aa16.98■□□□□ 0.31
NCK1-202ENST00000460960 TGS1Q96RS0 853 aaKnown RBP16.98■□□□□ 0.31
NCK1-202ENST00000460960 C22orf23Q9BZE7 217 aa16.98■□□□□ 0.31
NCK1-202ENST00000460960 MYH6P13533 1939 aa16.98■□□□□ 0.31
NCK1-202ENST00000460960 CCDC69A6NI79 296 aa16.97■□□□□ 0.31
NCK1-202ENST00000460960 NBNO60934 754 aa16.97■□□□□ 0.31
NCK1-202ENST00000460960 PARP1P09874 1014 aaKnown RBP16.97■□□□□ 0.31
NCK1-202ENST00000460960 CKBP12277 381 aa16.97■□□□□ 0.31
NCK1-202ENST00000460960 PSMA5P28066 241 aa16.97■□□□□ 0.31
NCK1-202ENST00000460960 SSTR3P32745 418 aaPredicted RBP16.97■□□□□ 0.31
NCK1-202ENST00000460960 ANAPC15P60006 121 aa16.97■□□□□ 0.31
NCK1-202ENST00000460960 ARHGAP1Q07960 439 aa16.97■□□□□ 0.31
NCK1-202ENST00000460960 APOA5Q6Q788 366 aa16.97■□□□□ 0.31
NCK1-202ENST00000460960 CATIPQ7Z7H3 387 aa16.97■□□□□ 0.31
NCK1-202ENST00000460960 CMTR1Q8N1G2 835 aaKnown RBP16.97■□□□□ 0.31
NCK1-202ENST00000460960 TAAR1Q96RJ0 339 aa16.97■□□□□ 0.31
NCK1-202ENST00000460960 RAD9AQ99638 391 aa16.97■□□□□ 0.31
NCK1-202ENST00000460960 AGXT2Q9BYV1 514 aa16.97■□□□□ 0.31
NCK1-202ENST00000460960 UBE2ZQ9H832 354 aaPredicted RBP16.97■□□□□ 0.31
NCK1-202ENST00000460960 SUGCTQ9HAC7 445 aa16.97■□□□□ 0.31
NCK1-202ENST00000460960 HDAC6Q9UBN7 1215 aa16.97■□□□□ 0.31
NCK1-202ENST00000460960 CYP46A1Q9Y6A2 500 aa16.97■□□□□ 0.31
NCK1-202ENST00000460960 KLF18A0A0U1RQI7 1052 aa16.96■□□□□ 0.31
NCK1-202ENST00000460960 CYTH3O43739 400 aa16.96■□□□□ 0.31
NCK1-202ENST00000460960 DHX16O60231 1041 aaKnown RBP16.96■□□□□ 0.31
NCK1-202ENST00000460960 GJB5O95377 273 aa16.96■□□□□ 0.31
NCK1-202ENST00000460960 PLEKHA8P1O95397 391 aa16.96■□□□□ 0.31
NCK1-202ENST00000460960 ZNF286BP0CG31 522 aa16.96■□□□□ 0.31
NCK1-202ENST00000460960 KCNA5P22460 613 aa16.96■□□□□ 0.31
NCK1-202ENST00000460960 PSEN2P49810 448 aa16.96■□□□□ 0.31
NCK1-202ENST00000460960 IKBKEQ14164 716 aa16.96■□□□□ 0.31
NCK1-202ENST00000460960 GPNMBQ14956 572 aa16.96■□□□□ 0.31
NCK1-202ENST00000460960 CDC37Q16543 378 aaPredicted RBP16.96■□□□□ 0.31
NCK1-202ENST00000460960 DGKDQ16760 1214 aa16.96■□□□□ 0.31
NCK1-202ENST00000460960 ASPRV1Q53RT3 343 aa16.96■□□□□ 0.31
NCK1-202ENST00000460960 CCDC62Q6P9F0 684 aa16.96■□□□□ 0.31
NCK1-202ENST00000460960 MICU3Q86XE3 530 aa16.96■□□□□ 0.31
NCK1-202ENST00000460960 TBC1D5Q92609 795 aa16.96■□□□□ 0.31
NCK1-202ENST00000460960 KAT2BQ92831 832 aa16.96■□□□□ 0.31
NCK1-202ENST00000460960 UIMC1Q96RL1 719 aa16.96■□□□□ 0.31
NCK1-202ENST00000460960 CTAGE1Q96RT6 745 aa16.96■□□□□ 0.31
NCK1-202ENST00000460960 CD320Q9NPF0 282 aa16.96■□□□□ 0.31
NCK1-202ENST00000460960 LMCD1Q9NZU5 365 aa16.96■□□□□ 0.31
NCK1-202ENST00000460960 KIAA1217Q5T5P2 1943 aa16.96■□□□□ 0.3
NCK1-202ENST00000460960 SIP14410 1827 aa16.96■□□□□ 0.3
NCK1-202ENST00000460960 ABHD14A-ACY1A0A1B0GW23 586 aa16.95■□□□□ 0.3
NCK1-202ENST00000460960 LINC01553A4QN01 128 aa16.95■□□□□ 0.3
NCK1-202ENST00000460960 KLRF2D3W0D1 207 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms