RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 TRIM44Q96DX7 344 aaPredicted RBP12.63□□□□□ -0.39
APTX-209ENST00000460940 TSEN34Q9BSV6 310 aaKnown RBP12.63□□□□□ -0.39
APTX-209ENST00000460940 BRMS1Q9HCU9 246 aa12.63□□□□□ -0.39
APTX-209ENST00000460940 TMEM260Q9NX78 707 aa12.63□□□□□ -0.39
APTX-209ENST00000460940 DDX11L8A8MPP1 907 aa12.63□□□□□ -0.39
APTX-209ENST00000460940 PGK1P00558 417 aa12.63□□□□□ -0.39
APTX-209ENST00000460940 MNX1P50219 401 aaPredicted RBP12.63□□□□□ -0.39
APTX-209ENST00000460940 NPY5RQ15761 445 aa12.63□□□□□ -0.39
APTX-209ENST00000460940 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.63□□□□□ -0.39
APTX-209ENST00000460940 PCSK9Q8NBP7 692 aaKnown RBP12.63□□□□□ -0.39
APTX-209ENST00000460940 KLHDC9Q8NEP7 349 aa12.63□□□□□ -0.39
APTX-209ENST00000460940 EMID1Q96A84 441 aaPredicted RBP12.63□□□□□ -0.39
APTX-209ENST00000460940 GPRASP2Q96D09 838 aa12.63□□□□□ -0.39
APTX-209ENST00000460940 DDX41Q9UJV9 622 aaKnown RBP12.63□□□□□ -0.39
APTX-209ENST00000460940 KIAA1217Q5T5P2 1943 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 MOXD2PA6NHM9 499 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 M0R2N6 131 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 TRAK2O60296 914 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 ZEB2O60315 1214 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 OFD1O75665 1012 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 ARIH2O95376 493 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 GH1P01241 217 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 CYP3A4P08684 503 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 C6orf222P0C671 652 aaPredicted RBP12.62□□□□□ -0.39
APTX-209ENST00000460940 COL6A1P12109 1028 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 CPT1AP50416 773 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 ARHGAP4P98171 946 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 FSCN1Q16658 493 aaKnown RBP12.62□□□□□ -0.39
APTX-209ENST00000460940 BRDTQ58F21 947 aaPredicted RBP12.62□□□□□ -0.39
APTX-209ENST00000460940 KRT25Q7Z3Z0 450 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 FAM184AQ8NB25 1140 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 OR6J1Q8NGC5 347 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 CRYGNQ8WXF5 182 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 PGBD1Q96JS3 809 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 C11orf49Q9H6J7 331 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 KCNJ14Q9UNX9 436 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 PHF24Q9UPV7 400 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.62□□□□□ -0.39
APTX-209ENST00000460940 UBIAD1Q9Y5Z9 338 aa12.62□□□□□ -0.39
APTX-209ENST00000460940 SPATA31C2B4DYI2 1134 aa12.61□□□□□ -0.39
APTX-209ENST00000460940 MAFGO15525 162 aa12.61□□□□□ -0.39
APTX-209ENST00000460940 DYNC1LI2O43237 492 aaPredicted RBP12.61□□□□□ -0.39
APTX-209ENST00000460940 GJC2Q5T442 439 aaPredicted RBP12.61□□□□□ -0.39
APTX-209ENST00000460940 NIPA1Q7RTP0 329 aa12.61□□□□□ -0.39
APTX-209ENST00000460940 RASGRP4Q8TDF6 673 aa12.61□□□□□ -0.39
APTX-209ENST00000460940 DIS3LQ8TF46 1054 aaKnown RBP12.61□□□□□ -0.39
APTX-209ENST00000460940 SNX21Q969T3 373 aa12.61□□□□□ -0.39
APTX-209ENST00000460940 PAWRQ96IZ0 340 aaKnown RBP12.61□□□□□ -0.39
APTX-209ENST00000460940 CTAGE5O15320 804 aa12.61□□□□□ -0.39
APTX-209ENST00000460940 MMP1P03956 469 aa12.61□□□□□ -0.39
APTX-209ENST00000460940 MYCNP04198 464 aaPredicted RBP12.61□□□□□ -0.39
APTX-209ENST00000460940 ITGB5P18084 799 aa12.61□□□□□ -0.39
APTX-209ENST00000460940 UBA1P22314 1058 aaKnown RBP12.61□□□□□ -0.39
APTX-209ENST00000460940 KRT2P35908 639 aa12.61□□□□□ -0.39
APTX-209ENST00000460940 ARHGAP1Q07960 439 aa12.61□□□□□ -0.39
APTX-209ENST00000460940 MTMR1Q13613 665 aa12.61□□□□□ -0.39
APTX-209ENST00000460940 LAMC2Q13753 1193 aa12.61□□□□□ -0.39
APTX-209ENST00000460940 CEP55Q53EZ4 464 aa12.61□□□□□ -0.39
APTX-209ENST00000460940 CCSAPQ6IQ19 270 aaPredicted RBP12.61□□□□□ -0.39
APTX-209ENST00000460940 GIMAP8Q8ND71 665 aaPredicted RBP12.61□□□□□ -0.39
APTX-209ENST00000460940 C8orf76Q96K31 380 aa12.61□□□□□ -0.39
APTX-209ENST00000460940 SENP7Q9BQF6 1050 aa12.61□□□□□ -0.39
APTX-209ENST00000460940 MXRA8Q9BRK3 442 aa12.61□□□□□ -0.39
APTX-209ENST00000460940 HTATIP2Q9BUP3 242 aa12.61□□□□□ -0.39
APTX-209ENST00000460940 JADE2Q9NQC1 790 aa12.61□□□□□ -0.39
APTX-209ENST00000460940 CHMP5Q9NZZ3 219 aa12.61□□□□□ -0.39
APTX-209ENST00000460940 MYADML2A6NDP7 307 aa12.6□□□□□ -0.39
APTX-209ENST00000460940 A6NJR5 290 aa12.6□□□□□ -0.39
APTX-209ENST00000460940 TULP1O00294 542 aaPredicted RBP12.6□□□□□ -0.39
APTX-209ENST00000460940 ADAMTS3O15072 1205 aa12.6□□□□□ -0.39
APTX-209ENST00000460940 USP11P51784 963 aa12.6□□□□□ -0.39
APTX-209ENST00000460940 SETQ01105 290 aaPredicted RBP12.6□□□□□ -0.39
APTX-209ENST00000460940 SEMA3FQ13275 785 aa12.6□□□□□ -0.39
APTX-209ENST00000460940 CUL4AQ13619 759 aa12.6□□□□□ -0.39
APTX-209ENST00000460940 NEDD9Q14511 834 aa12.6□□□□□ -0.39
APTX-209ENST00000460940 NONOQ15233 471 aaKnown RBP eCLIP12.6□□□□□ -0.39
APTX-209ENST00000460940 SAFBQ15424 915 aaKnown RBP eCLIP12.6□□□□□ -0.39
APTX-209ENST00000460940 LY6KQ17RY6 165 aa12.6□□□□□ -0.39
APTX-209ENST00000460940 GNASQ5JWF2 1037 aa12.6□□□□□ -0.39
APTX-209ENST00000460940 TMEM63BQ5T3F8 832 aa12.6□□□□□ -0.39
APTX-209ENST00000460940 KRT40Q6A162 431 aa12.6□□□□□ -0.39
APTX-209ENST00000460940 RTEL1Q9NZ71 1219 aa12.6□□□□□ -0.39
APTX-209ENST00000460940 CCDC194A0A1B0GVG4 234 aa12.59□□□□□ -0.39
APTX-209ENST00000460940 K7ELQ4 463 aaPredicted RBP12.59□□□□□ -0.39
APTX-209ENST00000460940 KPNA6O60684 536 aa12.59□□□□□ -0.39
APTX-209ENST00000460940 DTNBO60941 627 aa12.59□□□□□ -0.39
APTX-209ENST00000460940 CABYRO75952 493 aa12.59□□□□□ -0.39
APTX-209ENST00000460940 CIITAP33076 1130 aa12.59□□□□□ -0.39
APTX-209ENST00000460940 ZNF76P36508 570 aa12.59□□□□□ -0.39
APTX-209ENST00000460940 ACLYP53396 1101 aa12.59□□□□□ -0.39
APTX-209ENST00000460940 KCNA10Q16322 511 aa12.59□□□□□ -0.39
APTX-209ENST00000460940 CELF3Q5SZQ8 465 aaKnown RBP12.59□□□□□ -0.39
APTX-209ENST00000460940 UTP14CQ5TAP6 766 aaKnown RBP12.59□□□□□ -0.39
APTX-209ENST00000460940 PPTC7Q8NI37 304 aa12.59□□□□□ -0.39
APTX-209ENST00000460940 COPS5Q92905 334 aa12.59□□□□□ -0.39
APTX-209ENST00000460940 GJB4Q9NTQ9 266 aa12.59□□□□□ -0.39
APTX-209ENST00000460940 POLR3EQ9NVU0 708 aa12.59□□□□□ -0.39
APTX-209ENST00000460940 MEIS1O00470 390 aa12.59□□□□□ -0.39
APTX-209ENST00000460940 GGPS1O95749 300 aa12.59□□□□□ -0.39
APTX-209ENST00000460940 PTMSP20962 102 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms