RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 DYMQ7RTS9 669 aa6.14□□□□□ -1.43
SF3A3-202ENST00000460925 GPATCH11Q8N954 259 aa6.14□□□□□ -1.43
SF3A3-202ENST00000460925 BAHD1Q8TBE0 780 aaPredicted RBP6.14□□□□□ -1.43
SF3A3-202ENST00000460925 LENG1Q96BZ8 264 aaPredicted RBP6.14□□□□□ -1.43
SF3A3-202ENST00000460925 VWCEQ96DN2 955 aa6.14□□□□□ -1.43
SF3A3-202ENST00000460925 CAMKK2Q96RR4 588 aa6.14□□□□□ -1.43
SF3A3-202ENST00000460925 KLHL25Q9H0H3 589 aa6.14□□□□□ -1.43
SF3A3-202ENST00000460925 NOP58Q9Y2X3 529 aaKnown RBP6.14□□□□□ -1.43
SF3A3-202ENST00000460925 QSER1Q2KHR3 1735 aa6.13□□□□□ -1.43
SF3A3-202ENST00000460925 FAM86C2PA6NEL3 165 aa6.13□□□□□ -1.43
SF3A3-202ENST00000460925 AGRPO00253 132 aa6.13□□□□□ -1.43
SF3A3-202ENST00000460925 CAPNS1P04632 268 aa6.13□□□□□ -1.43
SF3A3-202ENST00000460925 IBSPP21815 317 aaPredicted RBP6.13□□□□□ -1.43
SF3A3-202ENST00000460925 RRP1P56182 461 aaKnown RBP6.13□□□□□ -1.43
SF3A3-202ENST00000460925 TKFCQ3LXA3 575 aa6.13□□□□□ -1.43
SF3A3-202ENST00000460925 CCDC30Q5VVM6 783 aa6.13□□□□□ -1.43
SF3A3-202ENST00000460925 ARMCX6Q7L4S7 300 aa6.13□□□□□ -1.43
SF3A3-202ENST00000460925 FILIP1Q7Z7B0 1213 aa6.13□□□□□ -1.43
SF3A3-202ENST00000460925 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.13□□□□□ -1.43
SF3A3-202ENST00000460925 ZNF513Q8N8E2 541 aaPredicted RBP6.13□□□□□ -1.43
SF3A3-202ENST00000460925 DNAJB8Q8NHS0 232 aa6.13□□□□□ -1.43
SF3A3-202ENST00000460925 XAGE3Q8WTP9 111 aa6.13□□□□□ -1.43
SF3A3-202ENST00000460925 APBA2Q99767 749 aa6.13□□□□□ -1.43
SF3A3-202ENST00000460925 HAUS7Q99871 368 aa6.13□□□□□ -1.43
SF3A3-202ENST00000460925 DPH2Q9BQC3 489 aaPredicted RBP6.13□□□□□ -1.43
SF3A3-202ENST00000460925 SRP68Q9UHB9 627 aaKnown RBP6.13□□□□□ -1.43
SF3A3-202ENST00000460925 NOB1Q9ULX3 412 aaKnown RBP6.13□□□□□ -1.43
SF3A3-202ENST00000460925 CEP131Q9UPN4 1083 aa6.13□□□□□ -1.43
SF3A3-202ENST00000460925 PLAAQ9Y263 795 aa6.13□□□□□ -1.43
SF3A3-202ENST00000460925 ADCY9O60503 1353 aa6.13□□□□□ -1.43
SF3A3-202ENST00000460925 COL15A1P39059 1388 aa6.13□□□□□ -1.43
SF3A3-202ENST00000460925 hCG_2014768A0A024R1R8 64 aa6.12□□□□□ -1.43
SF3A3-202ENST00000460925 A0A1W2PQU0 124 aa6.12□□□□□ -1.43
SF3A3-202ENST00000460925 C9IYK1 514 aa6.12□□□□□ -1.43
SF3A3-202ENST00000460925 FAM229AH3BQW9 127 aa6.12□□□□□ -1.43
SF3A3-202ENST00000460925 PLSCR1O15162 318 aa6.12□□□□□ -1.43
SF3A3-202ENST00000460925 CBFA2T2O43439 604 aa6.12□□□□□ -1.43
SF3A3-202ENST00000460925 RNGTTO60942 597 aaKnown RBP6.12□□□□□ -1.43
SF3A3-202ENST00000460925 PTMAP06454 111 aaKnown RBP6.12□□□□□ -1.43
SF3A3-202ENST00000460925 VIL1P09327 827 aaKnown RBP6.12□□□□□ -1.43
SF3A3-202ENST00000460925 HOXB7P09629 217 aa6.12□□□□□ -1.43
SF3A3-202ENST00000460925 TRIM27P14373 513 aa6.12□□□□□ -1.43
SF3A3-202ENST00000460925 PTMSP20962 102 aa6.12□□□□□ -1.43
SF3A3-202ENST00000460925 SOS1Q07889 1333 aaPredicted RBP6.12□□□□□ -1.43
SF3A3-202ENST00000460925 DALRD3Q5D0E6 543 aaKnown RBP6.12□□□□□ -1.43
SF3A3-202ENST00000460925 AXDND1Q5T1B0 1012 aaPredicted RBP6.12□□□□□ -1.43
SF3A3-202ENST00000460925 NBPF12Q5TAG4 269 aaPredicted RBP6.12□□□□□ -1.43
SF3A3-202ENST00000460925 TREML4Q6UXN2 200 aa6.12□□□□□ -1.43
SF3A3-202ENST00000460925 PANK1Q8TE04 598 aa6.12□□□□□ -1.43
SF3A3-202ENST00000460925 EZH1Q92800 747 aaPredicted RBP6.12□□□□□ -1.43
SF3A3-202ENST00000460925 PSMG3-AS1Q96PY0 264 aa6.12□□□□□ -1.43
SF3A3-202ENST00000460925 STK31Q9BXU1 1019 aa6.12□□□□□ -1.43
SF3A3-202ENST00000460925 CEP41Q9BYV8 373 aa6.12□□□□□ -1.43
SF3A3-202ENST00000460925 CNTNAP4Q9C0A0 1308 aa6.12□□□□□ -1.43
SF3A3-202ENST00000460925 PDGFDQ9GZP0 370 aaPredicted RBP6.12□□□□□ -1.43
SF3A3-202ENST00000460925 DDX21Q9NR30 783 aaKnown RBP eCLIP6.12□□□□□ -1.43
SF3A3-202ENST00000460925 COL4A3BPQ9Y5P4 624 aa6.12□□□□□ -1.43
SF3A3-202ENST00000460925 COL24A1Q17RW2 1714 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 KRBA1A5PL33 1030 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 RFPL3O75679 317 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 ASMTLO95671 621 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 STARD3NLO95772 234 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 EPHX1P07099 455 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 SPATA31C1P0DKV0 1188 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 MASP1P48740 699 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 MMP14P50281 582 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 FAM193AP78312 1265 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 RNF4P78317 190 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 IGBP1P78318 339 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 HLFQ16534 295 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 ALDH1L2Q3SY69 923 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 HEATR6Q6AI08 1181 aaKnown RBP6.11□□□□□ -1.43
SF3A3-202ENST00000460925 COPS6Q7L5N1 327 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 AGGF1Q8N302 714 aaeCLIP6.11□□□□□ -1.43
SF3A3-202ENST00000460925 KISS1RQ969F8 398 aaPredicted RBP6.11□□□□□ -1.43
SF3A3-202ENST00000460925 FAM46AQ96IP4 442 aaKnown RBP6.11□□□□□ -1.43
SF3A3-202ENST00000460925 FBXL18Q96ME1 805 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 AKTIPQ9H8T0 292 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 SSU72Q9NP77 194 aaKnown RBP6.11□□□□□ -1.43
SF3A3-202ENST00000460925 PCDH12Q9NPG4 1184 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 ARHGEF4Q9NR80 690 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 DBF4Q9UBU7 674 aaPredicted RBP6.11□□□□□ -1.43
SF3A3-202ENST00000460925 PRDM4Q9UKN5 801 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 CACNA1SQ13698 1873 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 SPEF2Q9C093 1822 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 LAMB2P55268 1798 aa6.11□□□□□ -1.43
SF3A3-202ENST00000460925 PNPLA7Q6ZV29 1317 aa6.1□□□□□ -1.43
SF3A3-202ENST00000460925 KIF16BQ96L93 1317 aa6.1□□□□□ -1.43
SF3A3-202ENST00000460925 MYH3P11055 1940 aa6.1□□□□□ -1.43
SF3A3-202ENST00000460925 A0A087WZG4 1122 aa6.1□□□□□ -1.43
SF3A3-202ENST00000460925 LOC102724159A0A0B4J2E5 919 aa6.1□□□□□ -1.43
SF3A3-202ENST00000460925 PI4KAP2A4QPH2 592 aa6.1□□□□□ -1.43
SF3A3-202ENST00000460925 C9orf172C9J069 976 aa6.1□□□□□ -1.43
SF3A3-202ENST00000460925 CAMTA2O94983 1202 aa6.1□□□□□ -1.43
SF3A3-202ENST00000460925 CT47B1P0C2W7 299 aaPredicted RBP6.1□□□□□ -1.43
SF3A3-202ENST00000460925 PREPP48147 710 aa6.1□□□□□ -1.43
SF3A3-202ENST00000460925 EIF5P55010 431 aaKnown RBP6.1□□□□□ -1.43
SF3A3-202ENST00000460925 NRG1Q02297 640 aaPredicted RBP6.1□□□□□ -1.43
SF3A3-202ENST00000460925 PWP2Q15269 919 aaKnown RBP6.1□□□□□ -1.43
SF3A3-202ENST00000460925 UVSSAQ2YD98 709 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms