RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 DIS3L2Q8IYB7 885 aaKnown RBP25.59■■□□□ 1.69
C9orf3-209ENST00000460573 SPC25Q9HBM1 224 aa25.59■■□□□ 1.69
C9orf3-209ENST00000460573 XPNPEP3Q9NQH7 507 aa25.59■■□□□ 1.69
C9orf3-209ENST00000460573 GNEQ9Y223 722 aaKnown RBP25.59■■□□□ 1.69
C9orf3-209ENST00000460573 DNM1LO00429 736 aa25.58■■□□□ 1.69
C9orf3-209ENST00000460573 FIBPO43427 364 aa25.58■■□□□ 1.69
C9orf3-209ENST00000460573 PDCP20941 246 aa25.58■■□□□ 1.69
C9orf3-209ENST00000460573 ZNF76P36508 570 aa25.58■■□□□ 1.69
C9orf3-209ENST00000460573 CEP55Q53EZ4 464 aa25.58■■□□□ 1.69
C9orf3-209ENST00000460573 CCDC62Q6P9F0 684 aa25.58■■□□□ 1.69
C9orf3-209ENST00000460573 NIPA1Q7RTP0 329 aa25.58■■□□□ 1.69
C9orf3-209ENST00000460573 OXER1Q8TDS5 423 aa25.58■■□□□ 1.69
C9orf3-209ENST00000460573 TBCKQ8TEA7 893 aa25.58■■□□□ 1.69
C9orf3-209ENST00000460573 MXRA8Q9BRK3 442 aa25.58■■□□□ 1.69
C9orf3-209ENST00000460573 DDX41Q9UJV9 622 aaKnown RBP25.58■■□□□ 1.69
C9orf3-209ENST00000460573 KIAA1217Q5T5P2 1943 aa25.57■■□□□ 1.68
C9orf3-209ENST00000460573 BTBD18B2RXH4 712 aa25.57■■□□□ 1.68
C9orf3-209ENST00000460573 SPATA31C2B4DYI2 1134 aa25.57■■□□□ 1.68
C9orf3-209ENST00000460573 CIITAP33076 1130 aa25.57■■□□□ 1.68
C9orf3-209ENST00000460573 GJC2Q5T442 439 aaPredicted RBP25.57■■□□□ 1.68
C9orf3-209ENST00000460573 TNFRSF25Q93038 417 aa25.57■■□□□ 1.68
C9orf3-209ENST00000460573 FOXP1Q9H334 677 aaPredicted RBP25.57■■□□□ 1.68
C9orf3-209ENST00000460573 JADE2Q9NQC1 790 aa25.57■■□□□ 1.68
C9orf3-209ENST00000460573 PRKAG2Q9UGJ0 569 aa25.57■■□□□ 1.68
C9orf3-209ENST00000460573 ADCY6O43306 1168 aa25.56■■□□□ 1.68
C9orf3-209ENST00000460573 HSP90AA1P07900 732 aaKnown RBP25.56■■□□□ 1.68
C9orf3-209ENST00000460573 ITGB5P18084 799 aa25.56■■□□□ 1.68
C9orf3-209ENST00000460573 ATN1P54259 1190 aaPredicted RBP25.56■■□□□ 1.68
C9orf3-209ENST00000460573 GJA9P57773 515 aa25.56■■□□□ 1.68
C9orf3-209ENST00000460573 NKX3-2P78367 333 aa25.56■■□□□ 1.68
C9orf3-209ENST00000460573 GUCY1B3Q02153 619 aa25.56■■□□□ 1.68
C9orf3-209ENST00000460573 LARP1BQ659C4 914 aaKnown RBP25.56■■□□□ 1.68
C9orf3-209ENST00000460573 ZFP91Q96JP5 570 aaPredicted RBP25.56■■□□□ 1.68
C9orf3-209ENST00000460573 AP5M1Q9H0R1 490 aa25.56■■□□□ 1.68
C9orf3-209ENST00000460573 UPF3AQ9H1J1 476 aaKnown RBP25.56■■□□□ 1.68
C9orf3-209ENST00000460573 H3BQV1 296 aa25.55■■□□□ 1.68
C9orf3-209ENST00000460573 MEIS1O00470 390 aa25.55■■□□□ 1.68
C9orf3-209ENST00000460573 ARIH2O95376 493 aa25.55■■□□□ 1.68
C9orf3-209ENST00000460573 COL6A1P12109 1028 aa25.55■■□□□ 1.68
C9orf3-209ENST00000460573 NR5A1Q13285 461 aa25.55■■□□□ 1.68
C9orf3-209ENST00000460573 MTMR1Q13613 665 aa25.55■■□□□ 1.68
C9orf3-209ENST00000460573 BECN1Q14457 450 aa25.55■■□□□ 1.68
C9orf3-209ENST00000460573 LY6KQ17RY6 165 aa25.55■■□□□ 1.68
C9orf3-209ENST00000460573 LRRC26Q2I0M4 334 aa25.55■■□□□ 1.68
C9orf3-209ENST00000460573 MOXD1Q6UVY6 613 aa25.55■■□□□ 1.68
C9orf3-209ENST00000460573 PIK3AP1Q6ZUJ8 805 aa25.55■■□□□ 1.68
C9orf3-209ENST00000460573 RNF180Q86T96 592 aa25.55■■□□□ 1.68
C9orf3-209ENST00000460573 TLK2Q86UE8 772 aa25.55■■□□□ 1.68
C9orf3-209ENST00000460573 NAP1L4Q99733 375 aaKnown RBP25.55■■□□□ 1.68
C9orf3-209ENST00000460573 SENP7Q9BQF6 1050 aa25.55■■□□□ 1.68
C9orf3-209ENST00000460573 A0A1W2PPC1 479 aa25.54■■□□□ 1.68
C9orf3-209ENST00000460573 ADAMTS4O75173 837 aa25.54■■□□□ 1.68
C9orf3-209ENST00000460573 GH1P01241 217 aa25.54■■□□□ 1.68
C9orf3-209ENST00000460573 GNL2Q13823 731 aaKnown RBP25.54■■□□□ 1.68
C9orf3-209ENST00000460573 NEDD9Q14511 834 aa25.54■■□□□ 1.68
C9orf3-209ENST00000460573 GIMAP8Q8ND71 665 aaPredicted RBP25.54■■□□□ 1.68
C9orf3-209ENST00000460573 SYNRGQ9UMZ2 1314 aa25.54■■□□□ 1.68
C9orf3-209ENST00000460573 DYNC1LI2O43237 492 aaPredicted RBP25.53■■□□□ 1.68
C9orf3-209ENST00000460573 PGK1P00558 417 aa25.53■■□□□ 1.68
C9orf3-209ENST00000460573 CST5P28325 142 aaPredicted RBP25.53■■□□□ 1.68
C9orf3-209ENST00000460573 SETQ01105 290 aaPredicted RBP25.53■■□□□ 1.68
C9orf3-209ENST00000460573 INF2Q27J81 1249 aa25.53■■□□□ 1.68
C9orf3-209ENST00000460573 NEK8Q86SG6 692 aa25.53■■□□□ 1.68
C9orf3-209ENST00000460573 EMID1Q96A84 441 aaPredicted RBP25.53■■□□□ 1.68
C9orf3-209ENST00000460573 LENG1Q96BZ8 264 aaPredicted RBP25.53■■□□□ 1.68
C9orf3-209ENST00000460573 CYP3A7-CYP3A51PA0A087WV96 503 aa25.52■■□□□ 1.68
C9orf3-209ENST00000460573 FAM86B1E9PN63 330 aa25.52■■□□□ 1.68
C9orf3-209ENST00000460573 FAM86B2P0C5J1 330 aa25.52■■□□□ 1.68
C9orf3-209ENST00000460573 C6orf222P0C671 652 aaPredicted RBP25.52■■□□□ 1.68
C9orf3-209ENST00000460573 PDIA4P13667 645 aaKnown RBP25.52■■□□□ 1.68
C9orf3-209ENST00000460573 CYP3A7P24462 503 aa25.52■■□□□ 1.68
C9orf3-209ENST00000460573 U2AF2P26368 475 aaKnown RBP eCLIP25.52■■□□□ 1.683e-8■□□□□ 10.3
C9orf3-209ENST00000460573 SEMA3FQ13275 785 aa25.52■■□□□ 1.68
C9orf3-209ENST00000460573 LAMC2Q13753 1193 aa25.52■■□□□ 1.68
C9orf3-209ENST00000460573 LRRC41Q15345 812 aa25.52■■□□□ 1.68
C9orf3-209ENST00000460573 BRDTQ58F21 947 aaPredicted RBP25.52■■□□□ 1.68
C9orf3-209ENST00000460573 TMEM63BQ5T3F8 832 aa25.52■■□□□ 1.68
C9orf3-209ENST00000460573 PLA2G4DQ86XP0 818 aa25.52■■□□□ 1.68
C9orf3-209ENST00000460573 PCSK9Q8NBP7 692 aaKnown RBP25.52■■□□□ 1.68
C9orf3-209ENST00000460573 KLHDC9Q8NEP7 349 aa25.52■■□□□ 1.68
C9orf3-209ENST00000460573 OR6J1Q8NGC5 347 aa25.52■■□□□ 1.68
C9orf3-209ENST00000460573 TSEN34Q9BSV6 310 aaKnown RBP25.52■■□□□ 1.68
C9orf3-209ENST00000460573 KCNH7Q9NS40 1196 aa25.52■■□□□ 1.68
C9orf3-209ENST00000460573 MYH7BA7E2Y1 1941 aa25.51■■□□□ 1.67
C9orf3-209ENST00000460573 IGLV3-22A0A075B6J6 115 aa25.51■■□□□ 1.67
C9orf3-209ENST00000460573 ZEB2O60315 1214 aa25.51■■□□□ 1.67
C9orf3-209ENST00000460573 GCFC2P16383 781 aaKnown RBP25.51■■□□□ 1.67
C9orf3-209ENST00000460573 UBA1P22314 1058 aaKnown RBP25.51■■□□□ 1.67
C9orf3-209ENST00000460573 NOSTRINQ8IVI9 506 aa25.51■■□□□ 1.67
C9orf3-209ENST00000460573 DHX37Q8IY37 1157 aaKnown RBP25.51■■□□□ 1.67
C9orf3-209ENST00000460573 CYP2W1Q8TAV3 490 aa25.51■■□□□ 1.67
C9orf3-209ENST00000460573 LBHD1Q9BQE6 289 aaPredicted RBP25.51■■□□□ 1.67
C9orf3-209ENST00000460573 UBE2OQ9C0C9 1292 aaKnown RBP25.51■■□□□ 1.67
C9orf3-209ENST00000460573 ATP11BQ9Y2G3 1177 aa25.51■■□□□ 1.67
C9orf3-209ENST00000460573 EDIL3O43854 480 aa25.5■■□□□ 1.67
C9orf3-209ENST00000460573 GGPS1O95749 300 aa25.5■■□□□ 1.67
C9orf3-209ENST00000460573 MAGEA10P43363 369 aaPredicted RBP25.5■■□□□ 1.67
C9orf3-209ENST00000460573 CPT1AP50416 773 aa25.5■■□□□ 1.67
C9orf3-209ENST00000460573 SP2Q02086 613 aa25.5■■□□□ 1.67
C9orf3-209ENST00000460573 EARS2Q5JPH6 523 aaKnown RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms